Literature DB >> 25837252

The substrate-free and -bound crystal structures of the duplicated taurocyamine kinase from the human parasite Schistosoma mansoni.

Romain Merceron1, Ayman M Awama2, Roland Montserret1, Olivier Marcillat3, Patrice Gouet4.   

Abstract

The taurocyamine kinase from the blood fluke Schistosoma mansoni (SmTK) belongs to the phosphagen kinase (PK) family and catalyzes the reversible Mg(2+)-dependent transfer of a phosphoryl group between ATP and taurocyamine. SmTK is derived from gene duplication, as are all known trematode TKs. Our crystallographic study of SmTK reveals the first atomic structure of both a TK and a PK with a bilobal structure. The two unliganded lobes present a canonical open conformation and interact via their respective C- and N-terminal domains at a helix-mediated interface. This spatial arrangement differs from that observed in true dimeric PKs, in which both N-terminal domains make contact. Our structures of SmTK complexed with taurocyamine or l-arginine compounds explain the mechanism by which an arginine residue of the phosphagen specificity loop is crucial for substrate specificity. An SmTK crystal was soaked with the dead end transition state analog (TSA) components taurocyamine-NO3 (2-)-MgADP. One SmTK monomer was observed with two bound TSAs and an asymmetric conformation, with the first lobe semiclosed and the second closed. However, isothermal titration calorimetry and enzyme kinetics experiments showed that the two lobes function independently. A small angle x-ray scattering model of SmTK-TSA in solution with two closed active sites was generated.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Schistosoma mansoni; isothermal titration calorimetry (ITC); small angle x-ray scattering (SAXS); substrate specificity; taurocyamine kinase; transition state; x-ray crystallography

Mesh:

Substances:

Year:  2015        PMID: 25837252      PMCID: PMC4432309          DOI: 10.1074/jbc.M114.628909

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

1.  Crystal structure of brain-type creatine kinase at 1.41 A resolution.

Authors:  M Eder; U Schlattner; A Becker; T Wallimann; W Kabsch; K Fritz-Wolf
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

2.  Structure of human muscle creatine kinase.

Authors:  Y Q Shen; L Tang; H M Zhou; Z J Lin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-08

3.  Crystal structure of human ubiquitous mitochondrial creatine kinase.

Authors:  M Eder; K Fritz-Wolf; W Kabsch; T Wallimann; U Schlattner
Journal:  Proteins       Date:  2000-05-15

4.  Determination of the affinity of each component of a composite quaternary transition-state analogue complex of creatine kinase.

Authors:  Charles L Borders; Mark J Snider; Richard Wolfenden; Paul L Edmiston
Journal:  Biochemistry       Date:  2002-06-04       Impact factor: 3.162

5.  The 2.1 A structure of Torpedo californica creatine kinase complexed with the ADP-Mg(2+)-NO(3)(-)-creatine transition-state analogue complex.

Authors:  Sushmita D Lahiri; Pan-Fen Wang; Patricia C Babbitt; Michael J McLeish; George L Kenyon; Karen N Allen
Journal:  Biochemistry       Date:  2002-11-26       Impact factor: 3.162

6.  Nucleotide binding to creatine kinase: an isothermal titration microcalorimetry study.

Authors:  M Forstner; C Berger; T Wallimann
Journal:  FEBS Lett       Date:  1999-11-12       Impact factor: 4.124

Review 7.  Creatine and creatinine metabolism.

Authors:  M Wyss; R Kaddurah-Daouk
Journal:  Physiol Rev       Date:  2000-07       Impact factor: 37.312

Review 8.  Evolution and physiological roles of phosphagen systems.

Authors:  W R Ellington
Journal:  Annu Rev Physiol       Date:  2001       Impact factor: 19.318

9.  The three-dimensional structure of cytosolic bovine retinal creatine kinase.

Authors:  D Tisi ; B Bax ; A Loew
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-02

10.  Two-domain arginine kinases from the clams Solen strictus and Corbicula japonica: exceptional amino acid replacement of the functionally important D(62) by G.

Authors:  Tomohiko Suzuki; Nobuhiro Sugimura; Tomoyuki Taniguchi; Yukiko Unemi; Takami Murata; Mami Hayashida; Kohei Yokouchi; Kohji Uda; Takahiro Furukohri
Journal:  Int J Biochem Cell Biol       Date:  2002-10       Impact factor: 5.085

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  2 in total

1.  Positive selection adaptation of two-domain arginine kinase (AK) from cold seep Vesicomyidae clams.

Authors:  Xue Kong; Helu Liu; Haibin Zhang
Journal:  Mol Biol Rep       Date:  2018-07-07       Impact factor: 2.316

2.  Elevated μs-ms timescale backbone dynamics in the transition state analog form of arginine kinase.

Authors:  Omar Davulcu; Yu Peng; Rafael Brüschweiler; Jack J Skalicky; Michael S Chapman
Journal:  J Struct Biol       Date:  2017-05-08       Impact factor: 2.867

  2 in total

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