| Literature DB >> 25834988 |
Jarosław Sławiński1, Beata Żołnowska2, Zdzisław Brzozowski3, Anna Kawiak4,5, Mariusz Belka6, Tomasz Bączek7.
Abstract
A series of new 6-chloro-3-(2-arylmethylene-1-methylhydrazino)-1,4,2-benzodithiazine 1,1-dioxide derivatives were effectively synthesized from N-methyl-N-(6-chloro-1,1-dioxo-1,4,2-benzodithiazin-3-yl)hydrazines. The intermediate compounds as well as the products, were evaluated for their cytotoxic effects toward three human cancer cell lines. All compounds shown moderate or weak cytotoxic effects against the tested cancer cell lines, but selective cytotoxic effects were observed. Compound 16 exhibited the most potent cytotoxic activity against the HeLa cell line, with an IC50 value of 10 µM, while 14 was the most active against the MCF-7 and HCT-116 cell lines, affording IC50 values of 15 µM and 16 µM, respectively. The structure-activity relationship was evaluated based on QSAR methodology. The QSAR MCF-7 model indicated that natural charge on carbon atom C13 and energy of highest occupied molecular orbital (HOMO) are highly involved in cytotoxic activity against MCF-7 cell line. The cytotoxic activity of compounds against HCT-116 cell line is dependent on natural charge on carbon atom C13 and electrostatic charge on nitrogen atom N10. The obtained QSAR models could provide guidelines for further development of novel anticancer agents.Entities:
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Year: 2015 PMID: 25834988 PMCID: PMC6272346 DOI: 10.3390/molecules20045754
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Chemical structures of biological active 1,1-dioxo-1,4,2-benzodithiazines I–IV [1,2,3,4,5,6,7,8,9,10,11,12,13,14,15], and V.
Scheme 1Synthesis of N-methyl-N-(6-chloro-1,1-dioxo-1,4,2-benzodithiazin-3-yl)hydrazines 2‒4.
Scheme 2Synthesis of 6-chloro-7-R1-3-(2-arylmethylene-1-methylhydrazino)-1,1-dioxo-1,4,2-benzodithiazines 5‒18.
Cytotoxicity of compounds 2, 4 and 6‒18 toward human cancer cell lines.
| Compounds | IC50 [µM] | ||
|---|---|---|---|
| MCF-7 | HCT-116 | HeLa | |
| 250 ± 7 | 280 ± 1 | 125 ± 7 | |
| 155 ± 2 | 240 ± 5 | 99 ± 4 | |
| 45 ± 0.5 | 31 ± 1 | 66 ± 2 | |
| 270 ± 13 | 150 ± 4 | >>100 a | |
| 84 ± 3 | 38 ± 1 | 80 ± 1 | |
| 95 ± 1 | 24 ± 1 | 32 ± 2 | |
| 73 ± 2 | 39 ± 1 | 64 ± 3 | |
| 70 ± 3 | 38 ± 1 | 75 ± 3 | |
| 63 ± 1 | 84 ± 1 | 100 ± 3 | |
| 140 ± 1 | 115 ± 2 | 100 ± 1 | |
| 15 ± 0.5 | 16 ± 0.5 | 135 ± 9 | |
| 105 ± 2 | 70 ± 2 | 170 ± 5 | |
| 150 ± 3 | 23 ± 0.5 | 10 ± 0.5 | |
| 83 ± 1 | 74 ± 1 | 62 ± 1 | |
| 165 ± 6 | 260 ± 3 | 140 ± 7 | |
| 3.0 ± 0.1 | 3.8 ± 0.2 | 2.2 ± 0.1 | |
a viability of HeLa cell line at 100 µM of compd 7 was 100%.
Theoretical molecular parameters of compounds 6, 8‒18: CPK Area, CPK Volume, PSA, MW, CFD (HBD), CFD (HBA), Angle (i, j, k), Dihedral (i, j, k, l), Distance (i, j), LogP, Hardness.
| Compd | CPK Area (Å2) | CPK Volume (Å3) | PSA (Å2) | MW (amu) | CFD (HBD) | CFD (HBA) | Angle (C3,N9,N10) | Angle (N9,N10,C11) | Dihedral (C3,N9,N10,C11) | Dihedral (N9,N10,C11,C12) | Distance (S4,C12) | Distance (S1,C12) | LogP | Hardness |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 378.32 | 351.11 | 89.6827 | 411.890 | 2 | 8 | 119.59 | 115.50 | 69.29 | −179.26 | 6.053 | 5.332 | 4.8599 | 0.199531 | |
| 389.58 | 362.09 | 69.9921 | 474.787 | 1 | 7 | 119.89 | 116.30 | 65.86 | −179.35 | 6.053 | 5.325 | 6.0783 | 0.197595 | |
| 395.72 | 366.01 | 109.1826 | 440.888 | 1 | 10 | 120.39 | 117.25 | 61.89 | −179.55 | 6.052 | 5.320 | 5.2833 | 0.201345 | |
| 417.97 | 388.93 | 74.8555 | 504.813 | 1 | 8 | 119.77 | 116.17 | 66.77 | −179.57 | 6.055 | 5.335 | 5.9519 | 0.195736 | |
| 402.80 | 375.17 | 68.4649 | 509.232 | 1 | 7 | 119.73 | 116.36 | 65.77 | −179.05 | 6.050 | 5.317 | 6.6365 | 0.197948 | |
| 346.63 | 318.50 | 63.7233 | 368.869 | 1 | 7 | 121.27 | 117.32 | 59.23 | 179.13 | 6.044 | 5.315 | 2.9324 | 0.190920 | |
| 370.32 | 337.44 | 99.2438 | 414.850 | 0 | 10 | 120.74 | 118.17 | 58.08 | −179.47 | 6.027 | 5.308 | 3.6225 | 0.193076 | |
| 377.41 | 345.96 | 91.1344 | 430.917 | 0 | 10 | 121.28 | 118.67 | 55.91 | 179.99 | 6.045 | 5.329 | 4.3443 | 0.186695 | |
| 411.87 | 380.93 | 110.6991 | 455.899 | 2 | 9 | 119.50 | 115.35 | 69.58 | −179.19 | 6.053 | 5.334 | 4.1929 | 0.188761 | |
| 411.80 | 380.88 | 110.6926 | 455.899 | 2 | 9 | 119.90 | 116.04 | 66.55 | −179.41 | 6.058 | 5.337 | 4.1929 | 0.184929 | |
| 370.21 | 345.35 | 85.0143 | 406.874 | 1 | 8 | 119.29 | 115.11 | 63.61 | −177.70 | 6.017 | 5.199 | 4.7956 | 0.185247 | |
| 371.53 | 338.82 | 114.5075 | 425.833 | 0 | 11 | 120.30 | 117.52 | 60.87 | −179.34 | 6.027 | 5.303 | 3.1687 | 0.194908 |
CPK Area—surface area of a space-filling model; CPK Volume—volume of a space-filling model; PSA—polar surface area (N, O + attached hydrogens); MW—molecular weight; CFD (HBD)—number of hydrogen bond donors; CFD (HBA)—number of hydrogen bond acceptors; Angle (i, j, k)—angle involving atoms i, j, k (degrees); Dihedral (i, j, k, l)—dihedral angle involving atoms i, j, k, l (degrees); Distance (i, j)—distance involving atoms i, j (Å); LogP—lipophilicity estimated from Crippen model [22]; Hardness—-(HOMO—LUMO)/2 (eV).
Theoretical molecular parameters of compounds 6, 8‒18: E, E HOMO, E LUMO, Elect (i), Mull (i), Nat (i), Electronegativity.
| Compd | E | E HOMO | E LUMO | LUMO-HOMO | Elect (C13) | Mull (C13) | Nat (C13) | Elect (C11) | Mull (C11) | Nat (C11) | Elect (N10) | Mull (N10) | Nat (N10) | Electronegativity |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| (kcal/mol) | ||||||||||||||
| −1462850 | −194.26 | 56.16 | 250.42 | −0.579 | −0.303 | −0.410 | 0.330 | 0.224 | 0.226 | −0.384 | −0.352 | −0.376 | 0.110038 | |
| −3029531 | −201.90 | 46.09 | 247.99 | −0.608 | −0.306 | −0.411 | 0.299 | 0.217 | 0.213 | −0.365 | −0.338 | −0.355 | 0.124147 | |
| −1543557 | −214.66 | 38.03 | 252.69 | −0.588 | −0.308 | −0.411 | 0.253 | 0.215 | 0.203 | −0.338 | −0.338 | −0.350 | 0.140737 | |
| −3100993 | −196.45 | 49.20 | 245.65 | −0.587 | −0.306 | −0.411 | 0.297 | 0.217 | 0.213 | −0.355 | −0.337 | −0.353 | 0.117330 | |
| −3317493 | −208.48 | 39.95 | 248.43 | −0.582 | −0.307 | −0.411 | 0.301 | 0.218 | 0.209 | −0.350 | −0.334 | −0.349 | 0.134281 | |
| −1355166 | −186.14 | 53.47 | 239.61 | −0.662 | −0.306 | −0.410 | 0.175 | 0.157 | 0.183 | −0.384 | −0.327 | −0.351 | 0.105707 | |
| −1495275 | −218.12 | 24.20 | 242.32 | −0.609 | −0.311 | −0.412 | 0.143 | 0.131 | 0.141 | −0.376 | −0.297 | −0.313 | 0.154513 | |
| −1697748 | −218.76 | 15.55 | 234.31 | −0.602 | −0.311 | −0.411 | 0.189 | 0.175 | 0.163 | −0.340 | −0.301 | −0.317 | 0.161921 | |
| −1580568 | −195.25 | 41.65 | 236.90 | −0.595 | −0.304 | −0.411 | 0.350 | 0.225 | 0.228 | −0.386 | −0.351 | −0.377 | 0.122384 | |
| −1580564 | −191.14 | 40.95 | 232.09 | −0.574 | −0.307 | −0.411 | 0.347 | 0.212 | 0.215 | −0.375 | −0.334 | −0.355 | 0.119665 | |
| −1448937 | −206.78 | 25.71 | 232.49 | −0.575 | −0.307 | −0.411 | 0.326 | 0.158 | 0.208 | −0.399 | −0.310 | −0.350 | 0.144282 | |
| −1528335 | −224.84 | 19.78 | 244.62 | −0.595 | −0.313 | −0.413 | 0.150 | 0.139 | 0.150 | −0.383 | −0.296 | −0.316 | 0.163393 | |
E—total energy; E HOMO—energy of highest-occupied molecular orbital; E LUMO—energy of lowest-occupied molecular orbital; Elect (i)—electrostatic charge on atom i; Mull (i)—Mulliken charge on atom i; Nat (i)—natural charge on atom i; Electronegativity—-(HOMO + LUMO)/2 (eV).
The QSAR equations and their predictive performance in predicting cytotoxic activity of the 1,1-dioxo-1,4,2-benzodithiazine derivatives against MCF-7 and HCT-116 cell lines.
| Cell Line | Equation | N | R | s | Rcv | RMSECV | F | p |
|---|---|---|---|---|---|---|---|---|
| MCF-7 | IC50 = −72361.3 (Nat C13) + 2.8 (E HOMO) − 29088.3 | 12 | 0.874 | 23.52 | 0.750 | 28.66 | 14.592 | 0.001499 |
| HCT-116 | IC50 = −45749.1 (Nat C13) − 937.3 (Elect N10) − 19099.8 | 10 | 0.902 | 14.97 | 0.715 | 21.54 | 15.303 | 0.002782 |
N—number of compounds in data set; R—a correlation coefficient; s—a standard error of estimate; Rcv—a correlation coefficient of leave-one-out cross validation (LOO-CV); RMSECV—a root mean square error LOO-CV; F—Fisher test value; p—significance level of F test.
The cytotoxic activity against MCF-7 and HCT-116 obtained from experiments (observed) and from statistical calculations (predicted).
| Compounds | IC50 [µM] | |||
|---|---|---|---|---|
| MCF-7 | HCT-116 | |||
| Observed | Predicted | Observed | Predicted | |
| 45 ± 0.5 | 41 | 31 ± 1 | 17 | |
| 84 ± 3 | 92 | 38 ± 1 | 45 | |
| 95 ± 1 | 57 | 24 ± 1 | 20 | |
| 73 ± 2 | 108 | 39 ± 1 | 36 | |
| 70 ± 3 | 74 | 38 ± 1 | 31 | |
| 63 ± 1 | 64 | 84 ± 1 | - a | |
| 140 ± 1 | 120 | 115 ± 2 | 101 | |
| 15 ± 0.5 | 46 | 16 ± 0.5 | 22 | |
| 105 ± 2 | 111 | 70 ± 2 | 65 | |
| 150 ± 3 | 122 | 23 ± 0.5 | 54 | |
| 83 ± 1 | 79 | 74 ± 1 | 77 | |
| 165 ± 6 | 174 | 260 ± 3 | - a | |
a compound was identified as a statistical outlier.
Figure 2Isosurface plots of HOMO of compounds 6, 12, 13 and 14, and natural charges on atom C13.