Literature DB >> 25834931

Predicting storage-lipid water partitioning of organic solutes from molecular structure.

Anett Geisler1, Luise Oemisch1, Satoshi Endo1, Kai-Uwe Goss1,2.   

Abstract

Partitioning to storage fat is the major process for bioaccumulation of many neutral organic chemicals. In this work, we evaluated the performance of four predictive models, ABSOLV, COSMOtherm, KOWWIN, and SPARC to calculate storage lipid-water partition coefficients. In a first step of the validation, we used over 300 literature data for chemicals with relatively simple molecular structures. For these compounds the overall performance was similar for all models with a root-mean-square error (rmse) between 0.45 and 0.61 log units. Clear differences became visible in the second validation step where a subset with only H-bond-donor compounds was used. Here, COSMOtherm and SPARC performed clearly better with an rmse of 0.35 and 0.42 log units, respectively, compared to ABSOLV and KOWWIN with an rmse of 0.91 and 0.85 log units, respectively. The last step in our validation was a comparison with experimental values for 22 complex, multifunctional chemicals (including pesticides, hormones, mycotoxins) that we measured specifically for this validation purpose. For these chemicals, predictions by all models were less accurate than those for simpler chemicals. COSMOtherm performed the best (rmse 0.71 log units) while the other methods showed considerably poorer results (rmse 1.29 (ABSOLV), 1.25 (SPARC), and 1.62 (KOWWIN) log units).

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Year:  2015        PMID: 25834931     DOI: 10.1021/es506336m

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  3 in total

1.  Probing the Thermodynamics of Biomagnification in Zoo-Housed Polar Bears by Equilibrium Sampling of Dietary and Fecal Samples.

Authors:  Yuhao Chen; Ying Duan Lei; Jaap Wensvoort; Sarra Gourlie; Frank Wania
Journal:  Environ Sci Technol       Date:  2022-05-20       Impact factor: 11.357

2.  Exploring the role of octanol-water partition coefficient and Henry's law constant in predicting the lipid-water partition coefficients of organic chemicals.

Authors:  Muhammad Irfan Khawar; Azhar Mahmood; Deedar Nabi
Journal:  Sci Rep       Date:  2022-09-02       Impact factor: 4.996

3.  Prediction of Partition Coefficients of Environmental Toxins Using Computational Chemistry Methods.

Authors:  David van der Spoel; Sergio Manzetti; Haiyang Zhang; Andreas Klamt
Journal:  ACS Omega       Date:  2019-08-12
  3 in total

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