Literature DB >> 25831900

[Phylogeny of beta-xylanases from Planctomycetes].

D G Naumoff, A A Ivanova, S N Dedysh.   

Abstract

Here, we present the results of a computational analysis of a group of hypothetical GH10 endo-beta-xylanases from the Planctomycetes, a bacterial phylum with poorly characterized functional capabilities. These proteins are encoded in all analyzed genomes of heterotrophic Planctomycetes and form a phylogenetically distinct and tight cluster. In addition, we determined nucleotide sequences for endo-beta-xylanase genes from five strains of Isosphaera-Singulisphaera group of the Planctomycetes. The trees constructed for the 16S rRNA genes and the inferred amino acid sequences of endo-beta-xylanases were highly congruent, thus suggesting the vertical transfer of endo-beta-xylanase genes and their functional importance in Planctomycetes.

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Year:  2014        PMID: 25831900

Source DB:  PubMed          Journal:  Mol Biol (Mosk)        ISSN: 0026-8984


  4 in total

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Journal:  World J Microbiol Biotechnol       Date:  2017-06-07       Impact factor: 3.312

2.  Abundant Trimethylornithine Lipids and Specific Gene Sequences Are Indicative of Planctomycete Importance at the Oxic/Anoxic Interface in Sphagnum-Dominated Northern Wetlands.

Authors:  Eli K Moore; Laura Villanueva; Ellen C Hopmans; W Irene C Rijpstra; Anchelique Mets; Svetlana N Dedysh; Jaap S Sinninghe Damsté
Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

3.  Phylogenetic analysis of β-xylanase SRXL1 of Sporisorium reilianum and its relationship with families (GH10 and GH11) of Ascomycetes and Basidiomycetes.

Authors:  Jorge Álvarez-Cervantes; Gerardo Díaz-Godínez; Yuridia Mercado-Flores; Vijai Kumar Gupta; Miguel Angel Anducho-Reyes
Journal:  Sci Rep       Date:  2016-04-04       Impact factor: 4.379

4.  Frigoriglobus tundricola gen. nov., sp. nov., a psychrotolerant cellulolytic planctomycete of the family Gemmataceae from a littoral tundra wetland.

Authors:  Irina S Kulichevskaya; Anastasia A Ivanova; Daniil G Naumoff; Alexey V Beletsky; W Irene C Rijpstra; Jaap S Sinninghe Damsté; Andrey V Mardanov; Nikolai V Ravin; Svetlana N Dedysh
Journal:  Syst Appl Microbiol       Date:  2020-07-30       Impact factor: 4.022

  4 in total

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