Literature DB >> 25831511

Evidence for tunneling in base-catalyzed isomerization of glyceraldehyde to dihydroxyacetone by hydride shift under formose conditions.

Liang Cheng1, Charles Doubleday2, Ronald Breslow2.   

Abstract

Hydrogen atom transfer reactions between the aldose and ketose are key mechanistic features in formose chemistry by which formaldehyde is converted to higher sugars under credible prebiotic conditions. For one of these transformations, we have investigated whether hydrogen tunneling makes a significant contribution to the mechanism by examining the deuterium kinetic isotope effect associated with the hydrogen transfer during the isomerization of glyceraldehyde to the corresponding dihydroxyacetone. To do this, we developed a quantitative HPLC assay that allowed us to measure the apparent large intrinsic kinetic isotope effect. From the Arrhenius plot of the kinetic isotope effect, the ratio of the preexponential factors AH/AD was 0.28 and the difference in activation energies Ea(D) - Ea(H) was 9.1 kJ·mol(-1). All these results imply a significant quantum-mechanical tunneling component in the isomerization mechanism. This is supported by multidimensional tunneling calculations using POLYRATE with small curvature tunneling.

Entities:  

Keywords:  formose reaction; hydride shift; prebiotic reactions; quantum tunneling

Mesh:

Substances:

Year:  2015        PMID: 25831511      PMCID: PMC4394274          DOI: 10.1073/pnas.1503739112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  13 in total

1.  Experimental evidence for heavy-atom tunneling in the ring-opening of cyclopropylcarbinyl radical from intramolecular 12C/13C kinetic isotope effects.

Authors:  Ollie M Gonzalez-James; Xue Zhang; Ayan Datta; David A Hrovat; Weston Thatcher Borden; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2010-09-15       Impact factor: 15.419

2.  Quantum mechanical continuum solvation models.

Authors:  Jacopo Tomasi; Benedetta Mennucci; Roberto Cammi
Journal:  Chem Rev       Date:  2005-08       Impact factor: 60.622

3.  Deuterium studies reveal a new mechanism for the formose reaction involving hydride shifts.

Authors:  Chandrakumar Appayee; Ronald Breslow
Journal:  J Am Chem Soc       Date:  2014-03-04       Impact factor: 15.419

4.  Tunneling in the 1,5-hydrogen shift reactions of 1,3-cyclopentadiene and 5-methyl-1,3-cyclopentadiene.

Authors:  G Robert Shelton; David A Hrovat; Weston Thatcher Borden
Journal:  J Am Chem Soc       Date:  2007-01-10       Impact factor: 15.419

5.  Methylhydroxycarbene: tunneling control of a chemical reaction.

Authors:  Peter R Schreiner; Hans Peter Reisenauer; David Ley; Dennis Gerbig; Chia-Hua Wu; Wesley D Allen
Journal:  Science       Date:  2011-06-10       Impact factor: 47.728

6.  Mechanistic imperatives for aldose-ketose isomerization in water: specific, general base- and metal ion-catalyzed isomerization of glyceraldehyde with proton and hydride transfer.

Authors:  R W Nagorski; J P Richard
Journal:  J Am Chem Soc       Date:  2001-02-07       Impact factor: 15.419

7.  Cyclopropylhydroxycarbene.

Authors:  David Ley; Dennis Gerbig; J Philipp Wagner; Hans P Reisenauer; Peter R Schreiner
Journal:  J Am Chem Soc       Date:  2011-08-10       Impact factor: 15.419

8.  Capture of hydroxymethylene and its fast disappearance through tunnelling.

Authors:  Peter R Schreiner; Hans Peter Reisenauer; Frank C Pickard; Andrew C Simmonett; Wesley D Allen; Edit Mátyus; Attila G Császár
Journal:  Nature       Date:  2008-06-12       Impact factor: 49.962

9.  Computational evidence for heavy-atom tunneling in the bergman cyclization of a 10-membered-ring enediyne.

Authors:  Edyta M Greer; Christopher V Cosgriff; Charles Doubleday
Journal:  J Am Chem Soc       Date:  2013-07-02       Impact factor: 15.419

10.  Calculations find that tunneling plays a major role in the reductive elimination of methane from hydridomethylbis(trimethylphosphine)platinum: how to confirm this computational prediction experimentally.

Authors:  Ayan Datta; David A Hrovat; Weston Thatcher Borden
Journal:  J Am Chem Soc       Date:  2008-02-12       Impact factor: 15.419

View more
  2 in total

1.  Magnetic circular dichroism in Archean atmosphere and asymmetric photolysis of biomolecules: enantiomeric excess of prebiotic sugar.

Authors:  A Sharma
Journal:  J Biol Phys       Date:  2020-07-02       Impact factor: 1.560

2.  One-pot conversion of dihydroxyacetone into ethyl lactate by Zr-based catalysts.

Authors:  Junjun Shi; Fukun Li; Jie Zhang; Ning Li; Xingmin Wang; Xianming Zhang; Yunqi Liu
Journal:  RSC Adv       Date:  2021-03-15       Impact factor: 3.361

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.