Literature DB >> 25825834

Successful test launch for nanopore sequencing.

Nicholas J Loman1, Mick Watson2.   

Abstract

Mesh：

Year:  2015        PMID： 25825834     DOI： 10.1038/nmeth.3327

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  10 in total

1.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

2.  MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island.

Authors:  Philip M Ashton; Satheesh Nair; Tim Dallman; Salvatore Rubino; Wolfgang Rabsch; Solomon Mwaigwisya; John Wain; Justin O'Grady
Journal:  Nat Biotechnol       Date:  2014-12-08       Impact factor: 54.908

3.  Nanopore sequencing: from imagination to reality.

Authors:  Hagan Bayley
Journal:  Clin Chem       Date:  2014-12-04       Impact factor: 8.327

4.  Unfoldase-mediated protein translocation through an α-hemolysin nanopore.

Authors:  Jeff Nivala; Douglas B Marks; Mark Akeson
Journal:  Nat Biotechnol       Date:  2013-02-03       Impact factor: 54.908

Review 5.  The potential and challenges of nanopore sequencing.

Authors:  Daniel Branton; David W Deamer; Andre Marziali; Hagan Bayley; Steven A Benner; Thomas Butler; Massimiliano Di Ventra; Slaven Garaj; Andrew Hibbs; Xiaohua Huang; Stevan B Jovanovich; Predrag S Krstic; Stuart Lindsay; Xinsheng Sean Ling; Carlos H Mastrangelo; Amit Meller; John S Oliver; Yuriy V Pershin; J Michael Ramsey; Robert Riehn; Gautam V Soni; Vincent Tabard-Cossa; Meni Wanunu; Matthew Wiggin; Jeffery A Schloss
Journal:  Nat Biotechnol       Date:  2008-10       Impact factor: 54.908

6.  Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision.

Authors:  Gerald M Cherf; Kate R Lieberman; Hytham Rashid; Christopher E Lam; Kevin Karplus; Mark Akeson
Journal:  Nat Biotechnol       Date:  2012-02-14       Impact factor: 54.908

7.  poRe: an R package for the visualization and analysis of nanopore sequencing data.

Authors:  Mick Watson; Marian Thomson; Judith Risse; Richard Talbot; Javier Santoyo-Lopez; Karim Gharbi; Mark Blaxter
Journal:  Bioinformatics       Date:  2014-08-29       Impact factor: 6.937

8.  Poretools: a toolkit for analyzing nanopore sequence data.

Authors:  Nicholas J Loman; Aaron R Quinlan
Journal:  Bioinformatics       Date:  2014-08-20       Impact factor: 6.937

9.  A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer.

Authors:  Joshua Quick; Aaron R Quinlan; Nicholas J Loman
Journal:  Gigascience       Date:  2014-10-20       Impact factor: 6.524

10.  Improved data analysis for the MinION nanopore sequencer.

Authors:  Miten Jain; Ian T Fiddes; Karen H Miga; Hugh E Olsen; Benedict Paten; Mark Akeson
Journal:  Nat Methods       Date:  2015-02-16       Impact factor: 28.547
  10 in total
  53 in total

Review 1.  On the study of microbial transcriptomes using second- and third-generation sequencing technologies.

Authors:  Sang Chul Choi
Journal:  J Microbiol       Date:  2016-08-02       Impact factor: 3.422

2.  Nucleobase Recognition by Truncated α-Hemolysin Pores.

Authors:  Mariam Ayub; David Stoddart; Hagan Bayley
Journal:  ACS Nano       Date:  2015-07-28       Impact factor: 15.881

3.  The Amaryllidaceae alkaloids: biosynthesis and methods for enzyme discovery.

Authors:  Matthew B Kilgore; Toni M Kutchan
Journal:  Phytochem Rev       Date:  2015-12-17       Impact factor: 5.374

Review 4.  Role of RNA modifications in brain and behavior.

Authors:  Y Jung; D Goldman
Journal:  Genes Brain Behav       Date:  2018-03       Impact factor: 3.449

Review 5.  Twenty years of bacterial genome sequencing.

Authors:  Nicholas J Loman; Mark J Pallen
Journal:  Nat Rev Microbiol       Date:  2015-11-09       Impact factor: 60.633

6.  Molecular characterization of a new highly divergent Mobala related arenavirus isolated from Praomys sp. rodents.

Authors:  Emmanuel Nakouné; Nicolas Berthet; Huguette Simo Tchetgna; Stephane Descorps-Declère; Benjamin Selekon; Aurelia Kwasiborski; Mathias Vandenbogaert; Jean-Claude Manuguerra; Antoine Gessain; Valérie Caro
Journal:  Sci Rep       Date:  2021-05-13       Impact factor: 4.379

Review 7.  The emerging landscape of single-molecule protein sequencing technologies.

Authors:  Javier Antonio Alfaro; Peggy Bohländer; Mingjie Dai; Mike Filius; Cecil J Howard; Xander F van Kooten; Shilo Ohayon; Adam Pomorski; Sonja Schmid; Amit Meller; Chirlmin Joo; Aleksei Aksimentiev; Eric V Anslyn; Georges Bedran; Chan Cao; Mauro Chinappi; Etienne Coyaud; Cees Dekker; Gunnar Dittmar; Nicholas Drachman; Rienk Eelkema; David Goodlett; Sébastien Hentz; Umesh Kalathiya; Neil L Kelleher; Ryan T Kelly; Zvi Kelman; Sung Hyun Kim; Bernhard Kuster; David Rodriguez-Larrea; Stuart Lindsay; Giovanni Maglia; Edward M Marcotte; John P Marino; Christophe Masselon; Michael Mayer; Patroklos Samaras; Kumar Sarthak; Lusia Sepiashvili; Derek Stein; Meni Wanunu; Mathias Wilhelm; Peng Yin
Journal:  Nat Methods       Date:  2021-06-07       Impact factor: 47.990

8.  Genomic architecture of 5S rDNA cluster and its variations within and between species.

Authors:  Qiutao Ding; Runsheng Li; Xiaoliang Ren; Lu-Yan Chan; Vincy W S Ho; Dongying Xie; Pohao Ye; Zhongying Zhao
Journal:  BMC Genomics       Date:  2022-03-27       Impact factor: 3.969

9.  A vision for ubiquitous sequencing.

Authors:  Yaniv Erlich
Journal:  Genome Res       Date:  2015-10       Impact factor: 9.043

10.  Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.

Authors:  Alexander L Greninger; Samia N Naccache; Scot Federman; Guixia Yu; Placide Mbala; Vanessa Bres; Doug Stryke; Jerome Bouquet; Sneha Somasekar; Jeffrey M Linnen; Roger Dodd; Prime Mulembakani; Bradley S Schneider; Jean-Jacques Muyembe-Tamfum; Susan L Stramer; Charles Y Chiu
Journal:  Genome Med       Date:  2015-09-29       Impact factor: 11.117
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