Literature DB >> 25824943

RefSeq microbial genomes database: new representation and annotation strategy.

T Tatusova, S Ciufo, B Fedorov, K O'Neill, I Tolstoy.   

Abstract

Year:  2015        PMID: 25824943      PMCID: PMC4402550          DOI: 10.1093/nar/gkv278

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


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Nucleic Acids Res. 2014, 42: D553–D559. The authors wish to make the following corrections to their article. On page D555, second column: N50 < 5000 and L50 > 200, and contig# > 1000. should read N50 > 5000 and L50 < 200, and contig# < 1000. The results and conclusion of the article are not affected and remain valid. The authors apologise to the readers for the inconvenience caused.
  33 in total

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2.  Phenetic Comparison of Prokaryotic Genomes Using k-mers.

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Journal:  Mol Biol Evol       Date:  2017-10-01       Impact factor: 16.240

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Journal:  ISME J       Date:  2019-07-29       Impact factor: 10.302

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Authors:  Ben G McGahan; Beth K Neilsen; David L Kelly; Rodney D McComb; S A Jaffar Kazmi; Matt L White; Yan Zhang; Michele R Aizenberg
Journal:  J Neurooncol       Date:  2017-01-19       Impact factor: 4.130

5.  Search for 5'-leader regulatory RNA structures based on gene annotation aided by the RiboGap database.

Authors:  Mohammad Reza Naghdi; Katia Smail; Joy X Wang; Fallou Wade; Ronald R Breaker; Jonathan Perreault
Journal:  Methods       Date:  2017-03-06       Impact factor: 3.608

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Authors:  K Yacisin; J L Hsieh; D Weiss; J Ackelsberg; E Lee; L Jones; Y L Leung; L Li; J Yung; S Slavinski; H Hanson; A Ridpath; J Kornblum; Y Lin; S Robbe-Austerman; J Rakeman; U Siemetzki-Kapoor; T Stuber; S K Greene
Journal:  Epidemiol Infect       Date:  2017-06-20       Impact factor: 4.434

7.  Proteome analysis of the Mycobacterium tuberculosis Beijing B0/W148 cluster.

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Journal:  Sci Rep       Date:  2016-06-30       Impact factor: 4.379

8.  Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) of Porphyromonas gingivalis.

Authors:  Brian A Klein; Tsute Chen; Jodie C Scott; Andrea L Koenigsberg; Margaret J Duncan; Linden T Hu
Journal:  Mob DNA       Date:  2015-10-06

9.  Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes.

Authors:  Tim E Putman; Sebastian Burgstaller-Muehlbacher; Andra Waagmeester; Chunlei Wu; Andrew I Su; Benjamin M Good
Journal:  Database (Oxford)       Date:  2016-03-28       Impact factor: 3.451

10.  Interfering with Bacterial Quorum Sensing.

Authors:  Kerstin Reuter; Anke Steinbach; Volkhard Helms
Journal:  Perspect Medicin Chem       Date:  2016-01-18
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