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Literature DB >> 2582365

Analysis of cDNA and genomic clones coding for the pro alpha 1 chain of calf type II collagen.

F O Sangiorgi, V Benson-Chanda, W J de Wet, M E Sobel, F Ramirez.

Abstract

A bovine cDNA library constructed from fetal cartilage RNA was screened with a pro alpha 1(II) collagen specific chicken cDNA. A recombinant clone (Bc 7), with an insert of 1 kb, was identified and shown to contain sequences exhibiting 85% homology with the chicken pro alpha 1(II) collagen C-propeptide. Interspecies comparison strongly suggested that one potential glycosylation site present in the avian C-propeptide is not utilized, since this site is absent in the bovine chain. In addition, two overlapping genomic clones (Pal 3 and Pal 4) were isolated and partially characterized. These clones span 23 kb of DNA and contain approximately 17 kb of the pro alpha 1(II) calf gene. Sequencing of exon 1 has determined the length of the 3' untranslated region and the exact location of the polyadenylation attachment site.

Entities: Chemical Disease Gene Species

Mesh：

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Year: 1985 PMID： 2582365 PMCID： PMC341196 DOI： 10.1093/nar/13.8.2815

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

26 in total

1. Isolation and characterization of a cDNA clone for the amino-terminal portion of the pro-alpha 1(II) chain of cartilage collagen.

Authors: K Kohno; G R Martin; Y Yamada
Journal: J Biol Chem Date: 1984-11-25 Impact factor: 5.157

2. Isolation of cDNA and genomic DNA clones encoding type II collagen.

Authors: M F Young; G Vogeli; A M Nunez; M P Fernandez; M Sullivan; M E Sobel
Journal: Nucleic Acids Res Date: 1984-05-25 Impact factor: 16.971

3. A simple and very efficient method for generating cDNA libraries.

Authors: U Gubler; B J Hoffman
Journal: Gene Date: 1983-11 Impact factor: 3.688

4. Internal deletion in a collagen gene in a perinatal lethal form of osteogenesis imperfecta.

Authors: M L Chu; C J Williams; G Pepe; J L Hirsch; D J Prockop; F Ramirez
Journal: Nature Date: 1983 Jul 7-13 Impact factor: 49.962

5. Structure and sequence of the chicken type II procollagen gene. Characterization of the region encoding the carboxyl-terminal telopeptide and propeptide.

Authors: L J Sandell; H L Prentice; D Kravis; W B Upholt
Journal: J Biol Chem Date: 1984-06-25 Impact factor: 5.157

6. Synthesis and characterization of cDNA encoding a cartilage-specific short collagen.

Authors: Y Ninomiya; B R Olsen
Journal: Proc Natl Acad Sci U S A Date: 1984-05 Impact factor: 11.205

7. Identification of genomic DNA coding for chicken type II procollagen.

Authors: L J Sandell; Y Yamada; A Dorfman; W B Upholt
Journal: J Biol Chem Date: 1983-10-10 Impact factor: 5.157

8. Construction and characterization of type II collagen complementary deoxyribonucleic acid clones.

Authors: L N Lukens; A M Frischauf; P J Pawlowski; G T Brierley; H Lehrach
Journal: Nucleic Acids Res Date: 1983-09-10 Impact factor: 16.971

9. Isolation and characterization of genomic clones corresponding to the human type II procollagen gene.

Authors: C M Strom; W B Upholt
Journal: Nucleic Acids Res Date: 1984-01-25 Impact factor: 16.971

10. Regulation of the expression of genes encoding types I, II, and III collagen during chick embryonic development.

Authors: G T Merlino; C McKeon; B de Crombrugghe; I Pastan
Journal: J Biol Chem Date: 1983-08-25 Impact factor: 5.157

13 in total

1. Expression of type X collagen is transiently stimulated in redifferentiating chondrocytes pretreated with retinoic acid.

Authors: M Sanchez; E Gionti; G Pontarelli; A Arcella; F De Lorenzo
Journal: Biochem J Date: 1991-05-15 Impact factor: 3.857

2. Determination of the single polyadenylation site of the human pro alpha 1(II) collagen gene.

Authors: K Elima; T Vuorio; E Vuorio
Journal: Nucleic Acids Res Date: 1987-11-25 Impact factor: 16.971

3. Large introns in the 3' end of the gene for the pro alpha 1 (IV) chain of human basement membrane collagen.

Authors: R Soininen; L Tikka; L Chow; T Pihlajaniemi; M Kurkinen; D J Prockop; C D Boyd; K Tryggvason
Journal: Proc Natl Acad Sci U S A Date: 1986-03 Impact factor: 11.205

4. Exon/intron organization of the chicken type II procollagen gene: intron size distribution suggests a minimal intron size.

Authors: W B Upholt; L J Sandell
Journal: Proc Natl Acad Sci U S A Date: 1986-04 Impact factor: 11.205

5. The pro alpha 2(V) collagen gene is evolutionarily related to the major fibrillar-forming collagens.

Authors: D Weil; M Bernard; S Gargano; F Ramirez
Journal: Nucleic Acids Res Date: 1987-01-12 Impact factor: 16.971

6. Tenectin is a novel alphaPS2betaPS integrin ligand required for wing morphogenesis and male genital looping in Drosophila.

Authors: Stéphane Fraichard; Anne-Laure Bougé; Timmy Kendall; Isabelle Chauvel; Hervé Bouhin; Thomas A Bunch
Journal: Dev Biol Date: 2010-02-10 Impact factor: 3.582

7. Basic fibroblast growth factor as a selective inducer of matrix Gla protein gene expression in proliferative chondrocytes.

Authors: Chantal Stheneur; Marie-France Dumontier; Claudie Guedes; Marie-Claude Fulchignoni-Lataud; Khadija Tahiri; Gerard Karsenty; Marie Thérèse Corvol
Journal: Biochem J Date: 2003-01-01 Impact factor: 3.857