Literature DB >> 25820643

Microbial community analysis of switchgrass planted and unplanted soil microcosms displaying PCB dechlorination.

Yi Liang1, Richard Meggo, Dingfei Hu, Jerald L Schnoor, Timothy E Mattes.   

Abstract

Polychlorinated biphenyls (PCBs) pose potential risks to human and environmental health because they are carcinogenic, persistent, and bioaccumulative. In this study, we investigated bacterial communities in soil microcosms spiked with PCB 52, 77, and 153. Switchgrass (Panicum virgatum) was employed to improve overall PCB removal, and redox cycling (i.e., sequential periods of flooding followed by periods of no flooding) was performed in an effort to promote PCB dechlorination. Lesser chlorinated PCB transformation products were detected in all microcosms, indicating the occurrence of PCB dechlorination. Terminal restriction fragment length polymorphism (T-RFLP) and clone library analysis showed that PCB spiking, switchgrass planting, and redox cycling affected the microbial community structure. Putative organohalide-respiring Chloroflexi populations, which were not found in unflooded microcosms, were enriched after 2 weeks of flooding in the redox-cycled microcosms. Sequences classified as Geobacter sp. were detected in all microcosms and were most abundant in the switchgrass-planted microcosm spiked with PCB congeners. The presence of possible organohalide-respiring bacteria in these soil microcosms suggests that they play a role in PCB dechlorination therein.

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Year:  2015        PMID: 25820643      PMCID: PMC4498989          DOI: 10.1007/s00253-015-6545-x

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  74 in total

1.  Microbial diversity in production waters of a low-temperature biodegraded oil reservoir.

Authors:  Agnès Grabowski; Olivier Nercessian; Françoise Fayolle; Denis Blanchet; Christian Jeanthon
Journal:  FEMS Microbiol Ecol       Date:  2005-07-14       Impact factor: 4.194

Review 2.  The role of root exudates in rhizosphere interactions with plants and other organisms.

Authors:  Harsh P Bais; Tiffany L Weir; Laura G Perry; Simon Gilroy; Jorge M Vivanco
Journal:  Annu Rev Plant Biol       Date:  2006       Impact factor: 26.379

Review 3.  Advances in the use of terminal restriction fragment length polymorphism (T-RFLP) analysis of 16S rRNA genes to characterize microbial communities.

Authors:  Ursel M E Schütte; Zaid Abdo; Stephen J Bent; Conrad Shyu; Christopher J Williams; Jacob D Pierson; Larry J Forney
Journal:  Appl Microbiol Biotechnol       Date:  2008-07-22       Impact factor: 4.813

4.  TRiFLe, a program for in silico terminal restriction fragment length polymorphism analysis with user-defined sequence sets.

Authors:  Pilar Junier; Thomas Junier; Karl-Paul Witzel
Journal:  Appl Environ Microbiol       Date:  2008-08-29       Impact factor: 4.792

5.  Phylogenetic characterization of several para- and meta-PCB dechlorinating Clostridium species: 16s rDNA sequence analyses.

Authors:  L Hou; S K Dutta
Journal:  Lett Appl Microbiol       Date:  2000-03       Impact factor: 2.858

6.  Rapid assay for screening and characterizing microorganisms for the ability to degrade polychlorinated biphenyls.

Authors:  D L Bedard; R Unterman; L H Bopp; M J Brennan; M L Haberl; C Johnson
Journal:  Appl Environ Microbiol       Date:  1986-04       Impact factor: 4.792

7.  Plant compounds that induce polychlorinated biphenyl biodegradation by Arthrobacter sp. strain B1B.

Authors:  E S Gilbert; D E Crowley
Journal:  Appl Environ Microbiol       Date:  1997-05       Impact factor: 4.792

8.  Geobacter lovleyi sp. nov. strain SZ, a novel metal-reducing and tetrachloroethene-dechlorinating bacterium.

Authors:  Youlboong Sung; Kelly E Fletcher; Kirsti M Ritalahti; Robert P Apkarian; Natalia Ramos-Hernández; Robert A Sanford; Noha M Mesbah; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

9.  Dechlorination of commercial PCBs and other multiple halogenated compounds by a sediment-free culture containing Dehalococcoides and Dehalobacter.

Authors:  Shanquan Wang; Jianzhong He
Journal:  Environ Sci Technol       Date:  2013-09-04       Impact factor: 9.028

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