Literature DB >> 2581947

The enzymatic conversion of 3'-phosphate terminated RNA chains to 2',3'-cyclic phosphate derivatives.

D Reinberg, J Arenas, J Hurwitz.   

Abstract

The enzyme, RNA cyclase, has been purified from cell-free extracts of HeLa cells approximately 6000-fold. The enzyme catalyzes the conversion of 3'-phosphate ends of RNA chains to the 2',3'-cyclic phosphate derivative in the presence of ATP or adenosine 5'-(gamma-thio)triphosphate (ATP gamma S) and Mg2+. The formation of 1 mol of 2',3'-cyclic phosphate ends is associated with the disappearance of 1 mol of 3'-phosphate termini and the hydrolysis of 1 mol of ATP gamma S to AMP and thiopyrophosphate. No other nucleotides could substitute for ATP or ATP gamma S in the reaction. The reaction catalyzed by RNA cyclase was not reversible and exchange reactions between [32P]pyrophosphate and ATP were not detected. However, an enzyme-AMP intermediate could be identified that was hydrolyzed by the addition of inorganic pyrophosphate or 3'-phosphate terminated RNA chains but not by 3'-OH terminated chains or inorganic phosphate. 3'-[32P](Up)10Gp* could be converted to a form that yielded, (Formula: see text) after degradation with nuclease P1, by the addition of wheat germ RNA ligase, 5'-hydroxylpolynucleotide kinase, RNA cyclase, and ATP. This indicates that the RNA cyclase had catalyzed the formation of the 2',3'-cyclic phosphate derivative, the kinase had phosphorylated the 5'-hydroxyl end of the RNA, and the wheat germ RNA ligase had catalyzed the formation of a 3',5'-phosphodiester linkage concomitant with the conversion of the 2',3'-cyclic end to a 2'-phosphate terminated residue.

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Year:  1985        PMID: 2581947

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  12 in total

1.  Structures of RNA 3'-phosphate cyclase bound to ATP reveal the mechanism of nucleotidyl transfer and metal-assisted catalysis.

Authors:  Anupam K Chakravarty; Paul Smith; Stewart Shuman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-13       Impact factor: 11.205

2.  RNA 3'-phosphate cyclase (RtcA) catalyzes ligase-like adenylylation of DNA and RNA 5'-monophosphate ends.

Authors:  Anupam K Chakravarty; Stewart Shuman
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

3.  RtcB is the RNA ligase component of an Escherichia coli RNA repair operon.

Authors:  Naoko Tanaka; Stewart Shuman
Journal:  J Biol Chem       Date:  2011-01-11       Impact factor: 5.157

4.  Crystal structure of Rcl1, an essential component of the eukaryal pre-rRNA processosome implicated in 18s rRNA biogenesis.

Authors:  Naoko Tanaka; Paul Smith; Stewart Shuman
Journal:  RNA       Date:  2011-03-02       Impact factor: 4.942

5.  The human RNA 3'-terminal phosphate cyclase is a member of a new family of proteins conserved in Eucarya, Bacteria and Archaea.

Authors:  P Genschik; E Billy; M Swianiewicz; W Filipowicz
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

6.  Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer.

Authors:  Naoko Tanaka; Paul Smith; Stewart Shuman
Journal:  Structure       Date:  2010-03-14       Impact factor: 5.006

7.  Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis.

Authors:  E Billy; T Wegierski; F Nasr; W Filipowicz
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

8.  Structure-activity relationships in human RNA 3'-phosphate cyclase.

Authors:  Naoko Tanaka; Stewart Shuman
Journal:  RNA       Date:  2009-08-18       Impact factor: 4.942

9.  2'-Phosphate cyclase activity of RtcA: a potential rationale for the operon organization of RtcA with an RNA repair ligase RtcB in Escherichia coli and other bacterial taxa.

Authors:  Ushati Das; Stewart Shuman
Journal:  RNA       Date:  2013-08-14       Impact factor: 4.942

10.  Structure of RNA 3'-phosphate cyclase bound to substrate RNA.

Authors:  Kevin K Desai; Craig A Bingman; Chin L Cheng; George N Phillips; Ronald T Raines
Journal:  RNA       Date:  2014-08-26       Impact factor: 4.942

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