| Literature DB >> 25815043 |
Ziming Yin1, Yinhong Zhao2, Xudong Lu1, Huilong Duan1.
Abstract
Neuropsychological testing is an effective means for the screening of Alzheimer's disease. Multiple neuropsychological rating scales should be used together to get subjects' comprehensive cognitive state due to the limitation of a single scale, but it is difficult to operate in primary clinical settings because of the inadequacy of time and qualified clinicians. Aiming at identifying AD's stages more accurately and conveniently in screening, we proposed a computer-aided diagnosis approach based on critical items extracted from multiple neuropsychological scales. The proposed hybrid intelligent approach combines the strengths of rough sets, genetic algorithm, and Bayesian network. There are two stages: one is attributes reduction technique based on rough sets and genetic algorithm, which can find out the most discriminative items for AD diagnosis in scales; the other is uncertain reasoning technique based on Bayesian network, which can forecast the probability of suffering from AD. The experimental data set consists of 500 cases collected by a top hospital in China and each case is determined by the expert panel. The results showed that the proposed approach could not only reduce items drastically with the same classification precision, but also perform better on identifying different stages of AD comparing with other existing scales.Entities:
Mesh:
Year: 2015 PMID: 25815043 PMCID: PMC4359840 DOI: 10.1155/2015/258761
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
Minimental state examination (MMSE).
| Orientation | Year Month Day Date Time | ___/5 |
| Country Town District Hospital Ward | ___/5 | |
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| Registration | Examiner names 3 objects (e.g. apple, table, and penny). Patient asked to repeat (1 point for each correct answer). THEN patient to learn the 3 names repeating until correct. | ___/3 |
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| Attention and calculation | Subtract 7 from 100 and then repeat from result. Continue 5 times: 100 93 86 79 65 Alternative: spell “WORLD” backwards-“DLROW” | ___/5 |
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| Recall | Ask for names of 3 objects learned earlier. | ___/3 |
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| Language | Name a pencil and watch | ___/2 |
| Repeat “No fits, ands, or buts” | ___/1 | |
| Give a 3-stage command. Score 1 for each stage. E.g., “Place index finger of right hand on your nose and then on your left ear” | ___/3 | |
| Ask patient to read and obey a written command on a piece of paper stating “Close your eyes” | ___/1 | |
| Ask patient to write a sentence. Score if it is sensible and has a subject and a verb | ___/1 | |
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| Copying | Ask the patient to copy a pair of intersecting pentagons: | ___/1 |
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| ___/30 | |
Figure 1Montreal Cognitive Assessment (MOCA).
Figure 2Detailed algorithm flow of GA-RS.
Parameter settings of GA.
| Population size | 1000 |
| Number of generations | 500 |
| Initialization method | Binary method |
| Percentage of elite | 0.2 |
| Selection method | Tournament selection |
| Crossover method | Uniform crossover |
| Crossover ratio | 0.5 |
| Mutation method | Single-point mutation |
| Mutation ratio | 0.03 |
Part of AD dataset.
| Fact | Time orientation | Place orientation | Repetition | Visuospatial skills | ⋯ | Result |
|---|---|---|---|---|---|---|
| 1 | 5 | 5 | 1 | 5 | ⋯ | Normal |
| 2 | 4 | 5 | 1 | 5 | ⋯ | Normal |
| 3 | 4 | 5 | 1 | 3 | ⋯ | MCI |
| 4 | 1 | 4 | 0 | 3 | ⋯ | AD |
| ⋮ | ⋮ | ⋮ | ⋮ | ⋮ | ⋮ | ⋮ |
| 500 | 0 | 0 | 1 | 1 | ⋯ | AD |
Reduction results by GA-RS.
| Result | Source |
|---|---|
| Reading_Comprehension | MMSE |
| Visuospatial_Execution | MoCA |
| Naming | MoCA |
| Attention | MoCA |
| Figure_Copy | Figure copying test |
| Figure_Short_Memory | Figure copying test |
| Figure_Delay_Memory | Figure copying test |
| IADL | ADL |
| Word_Delay_Recall | Word-List Learning test |
| Word_AVG | Word-List Learning test |
Figure 3AD-related diagnosis assisting model.
The comparison of classifiers by 10-fold validation.
| Normal | MCI | AD | ACC% | ||||
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| BN | 85.41 | 87.23 | 78.95 | 73.17 | 90.7 | 95.12 | 85.27 |
| NN | 77.27 | 79.07 | 69.05 | 64.44 | 86.05 | 90.24 | 77.52 |
| C4.5 | 81.82 | 63.16 | 42.86 | 48.65 | 72.09 | 88.57 | 65.89 |
| SMO | 86.36 | 74.51 | 64.29 | 77.14 | 93.02 | 93.02 | 81.35 |
R: recall rate; P: precision rate; ACC: accuracy; BN: Bayesian network; NN: neural network.
Ranks in Friedman tests.
| Mean rank | |
|---|---|
| Bayesian network | 2.58 |
| Decision tree (C4.5) | 2.27 |
| Neural network | 2.50 |
| SMO | 2.66 |
Test statistics in Friedman tests.
| Chi-square | 15.789 |
| df | 3 |
| Asymp.Sig. | 0.001 |
The comparison of classifier by 0.632 bootstrap.
| Normal | MCI | AD | ACC% | ||||
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| BN | 84.55 | 84.91 | 75 | 76.39 | 91.94 | 89.81 | 83.73 |
| NN | 78.99 | 71.76 | 60.63 | 67.68 | 91.55 | 91.98 | 76.94 |
| C4.5 | 71.90 | 66.67 | 46.45 | 50.26 | 79.15 | 80.29 | 66.24 |
| SMO | 84.71 | 79.46 | 63.03 | 69.63 | 89.57 | 87.91 | 79.61 |
R: recall rate; P: precision rate; ACC: accuracy; BN: Bayesian network; NN: neural network.
Ranks in Friedman tests.
| Mean rank | |
|---|---|
| Bayesian network | 2.59 |
| C4.5 | 2.30 |
| Neural network | 2.54 |
| SMO | 2.57 |
Test statistics in Friedman tests.
| Chi-square | 48.694 |
| df | 3 |
| Asymp.Sig. | 0.000 |
Comparison of the classification performance before and after attributes reduction by Bayesian network.
| Normal | MCI | AD | ACC% | ||||
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| Before | 86.36 | 84.44 | 76.19 | 76.19 | 90.7 | 92.86 | 84.50 |
| After | 84.55 | 84.91 | 75 | 76.39 | 91.94 | 89.81 | 83.73 |
R: recall rate; P: precision rate; ACC: accuracy.
Comparison with the MMSE and the MoCA.
| Normal | MCI | AD | ACC% | ||||
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| MMSE | 93.88 | 67.65 | 45.83 | 61.11 | 84.29 | 93.65 | 74.29 |
| MoCA | 68.89 | 86.11 | 81.82 | 60.00 | 80.39 | 93.18 | 77.14 |
| Model | 84.55 | 84.91 | 75.00 | 76.39 | 91.94 | 89.81 | 83.57 |
R: recall rate; P: precision rate; ACC: accuracy.
Ranks in Friedman tests.
| Mean rank | |
|---|---|
| MMSE | 1.94 |
| MoCA | 1.98 |
| Model | 2.08 |
Test statistics in Friedman tests.
| Chi-square | 3.756 |
| df | 2 |
| Asymp.Sig. | 0.043 |