Literature DB >> 25812970

Chryseobacterium limigenitum sp. nov., isolated from dehydrated sludge.

Peter Kämpfer1, Janja Trček, Barbara Skok, Andrej Šorgo, Stefanie P Glaeser.   

Abstract

An intense yellow pigmented strain (SUR2(T)) isolated from dehydrated activated sludge was studied in detail to clarify its taxonomic assignment. Cells of the isolate showed a rod-shaped morphology and stained Gram-negative. Comparative 16S rRNA gene sequence analysis revealed highest similarities to the type strains of Chryseobacterium polytrichastri YG4-6(T) (98.6 %), Chryseobacterium aahli T68F(T) (97.9 %), Chryseobacterium daeguense K105(T) and Chryseobacterium gregarium DSM 79109(T) (both 97.4 %). 16S rRNA gene-sequence similarities to all other Chryseobacterium species were below 97.3 %. The fatty acid analysis of strain SUR2(T) revealed a Chryseobacterium typical profile composed mainly of the fatty acids C15:0 iso, C15:0 iso 2-OH, C17:1 iso ω9c, and C17:0 iso 3-OH. DNA-DNA hybridizations with the type strains of C. polytrichastri, C. aahli, C. daeguense and C. gregarium resulted in values below 70 %. Differentiating biochemical and chemotaxonomic properties showed differences to the most closely related species and suggest that the isolate SUR2(T) represents a novel species, for which the name Chryseobacterium limigenitum sp. nov. (type strain SUR2(T) = ZIM B1019(T) = CCM 8594(T) = LMG 28734(T)) is proposed.

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Year:  2015        PMID: 25812970     DOI: 10.1007/s10482-015-0434-2

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  4 in total

1.  Chryseobacterium chengduensis sp. nov. isolated from the air of captive giant panda enclosures in Chengdu, China.

Authors:  Cai-Fang Wen; Li-Xin Xi; Shan Zhao; Zhong-Xiang Hao; Lu Luo; Hong Liao; Zhen-Rong Chen; Rong She; Guo-Quan Han; San-Jie Cao; Rui Wu; Qi-Gui Yan; Rong Hou
Journal:  J Zhejiang Univ Sci B       Date:  2016-08       Impact factor: 3.066

2.  Chryseobacterium ginsengiterrae sp. nov., with Beta-Glucosidase Activity Isolated from Soil of a Ginseng Field.

Authors:  Jong-Hun Noh; Van-An Hoang; Yeon-Ju Kim; Jong-Pyo Kang; Deok-Chun Yang
Journal:  Curr Microbiol       Date:  2017-08-19       Impact factor: 2.188

3.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

4.  Draft genome sequence of Chryseobacterium limigenitum SUR2T (LMG 28734T) isolated from dehydrated sludge.

Authors:  Jure Škraban; Nikos C Kyrpides; Nicole Shapiro; William B Whitman; Janja Trček
Journal:  Braz J Microbiol       Date:  2017-07-18       Impact factor: 2.476

  4 in total

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