| Literature DB >> 25807119 |
.
Abstract
Entities:
Year: 2015 PMID: 25807119 PMCID: PMC4373799 DOI: 10.1371/journal.pone.0120063
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
List of full-length CYP450s of S. miltiorrhiza identified in this study.
| No. | Gene Name | Type | CYPClan | CYPFamily | CYPSubfamily | Accession No | Length | PI | Mol. wt (kDa) | Loca |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | SmCYP98A75 | A | 71 | CYP98 | CYP98A | KP337735 | 509 | 8.96 | 57.9 | S |
| 2 | SmCYP73A120 | A | 71 | CYP73 | CYP73A | KP337679 | 504 | 9.11 | 57.7 | S |
| 3 | SmCYP93B25 | A | 71 | CYP93 | CYP93B | KP337723 | 510 | 8.59 | 57.4 | * |
| 4 | SmCYP98A76 | A | 71 | CYP98 | CYP98A | KP337736 | 512 | 8.55 | 58.0 | S |
| 5 | SmCYP98A77 | A | 71 | CYP98 | CYP98A | KP337737 | 508 | 8.88 | 57.2 | * |
| 6 | SmCYP51G1 | non-A | 51 | CYP51 | CYP51G | KP337653 | 492 | 8.09 | 55.3 | S |
| 7 | SmCYP701A40 | A | 71 | CYP701 | CYP701A | KP337739 | 519 | 7.22 | 58.8 | S |
| 8 | SmCYP704A98 | non-A | 86 | CYP704 | CYP704A | KP337740 | 511 | 6.74 | 59.2 | S |
| 9 | SmCYP704B37 | non-A | 86 | CYP704 | CYP704B | KP337742 | 506 | 7.16 | 58.2 | S |
| 10 | SmCYP704A99 | non-A | 86 | CYP704 | CYP704A | KP337741 | 506 | 6.9 | 57.7 | S |
| 11 | SmCYP706C35 | A | 71 | CYP706 | CYP706C | KP337743 | 518 | 8.17 | 57.7 | * |
| 12 | SmCYP706G11 | A | 71 | CYP706 | CYP706G | KP337744 | 507 | 9.06 | 56.8 | * |
| 13 | SmCYP707A99 | non-A | 85 | CYP707 | CYP707A | KP337745 | 488 | 9.27 | 55.1 | S |
| 14 | SmCYP707A100 | non-A | 85 | CYP707 | CYP707A | KP337746 | 481 | 9.45 | 54.9 | * |
| 15 | SmCYP707A101 | non-A | 85 | CYP707 | CYP707A | KP337747 | 479 | 9.34 | 54.9 | S |
| 16 | SmCYP707A102 | non-A | 85 | CYP707 | CYP707A | KP337748 | 470 | 8.6 | 53.0 | S |
| 17 | SmCYP711A44 | non-A | 711 | CYP711 | CYP711A | KP337749 | 514 | 9.37 | 57.6 | S |
| 18 | SmCYP714A25 | non-A | 72 | CYP714 | CYP714A | KP337750 | 527 | 8.64 | 59.1 | S |
| 19 | SmCYP714E21 | non-A | 72 | CYP714 | CYP714E | KP337751 | 523 | 8.71 | 58.5 | S |
| 20 | SmCYP716A89 | non-A | 85 | CYP716 | CYP716A | KP337754 | 479 | 8.76 | 54.0 | S |
| 21 | SmCYP716C12 | non-A | 85 | CYP716 | CYP716C | KP337755 | 476 | 9 | 53.4 | S |
| 22 | SmCYP728D17 | non-A | 85 | CYP728 | CYP728D | KP337760 | 483 | 8.9 | 55.4 | S |
| 23 | SmCYP716D25 | non-A | 85 | CYP716 | CYP716D | KP337756 | 477 | 9.13 | 54.3 | S |
| 24 | SmCYP71AU51 | A | 71 | CYP71 | CYP71AU | KP337664 | 505 | 6.62 | 56.4 | * |
| 25 | SmCYP71AU52 | A | 71 | CYP71 | CYP71AU | KP337665 | 500 | 6.66 | 56.4 | * |
| 26 | SmCYP71AH15 | A | 71 | CYP71 | CYP71AH | KP337657 | 496 | 6.05 | 55.5 | S |
| 27 | SmCYP71AP14 | A | 71 | CYP71 | CYP71AP | KP337658 | 522 | 6.14 | 58.7 | * |
| 28 | SmCYP71A57 | A | 71 | CYP71 | CYP71A | KP337654 | 497 | 8.47 | 55.8 | * |
| 29 | SmCYP71A58 | A | 71 | CYP71 | CYP71A | KP337655 | 505 | 6.33 | 56.9 | S |
| 30 | SmCYP71A59 | A | 71 | CYP71 | CYP71A | KP337656 | 500 | 6.27 | 56.0 | * |
| 31 | SmCYP71D410 | A | 71 | CYP71 | CYP71D | KP337669 | 504 | 7.65 | 56.5 | S |
| 32 | SmCYP71D411 | A | 71 | CYP71 | CYP71D | KP337670 | 498 | 7.2 | 56.6 | S |
| 33 | SmCYP71D374 | A | 71 | CYP71 | CYP71D | KP337668 | 502 | 8.73 | 57.1 | * |
| 34 | SmCYP71BE37 | A | 71 | CYP71 | CYP71BE | KP337667 | 498 | 8.34 | 56.8 | * |
| 35 | SmCYP71D412 | A | 71 | CYP71 | CYP71D | KP337671 | 502 | 6.7 | 57.2 | * |
| 36 | SmCYP71D413 | A | 71 | CYP71 | CYP71D | KP337672 | 511 | 6.14 | 58.2 | * |
| 37 | SmCYP720A1 | non-A | 85 | CYP720 | CYP720A | KP337757 | 494 | 8.97 | 56.5 | S |
| 38 | SmCYP72A326 | non-A | 72 | CYP72 | CYP72A | KP337673 | 518 | 9.3 | 59.1 | S |
| 39 | SmCYP72A327 | non-A | 72 | CYP72 | CYP72A | KP337674 | 518 | 9.04 | 59.1 | S |
| 40 | SmCYP72A328 | non-A | 72 | CYP72 | CYP72A | KP337675 | 517 | 9.01 | 59.6 | S |
| 41 | SmCYP72A329 | non-A | 72 | CYP72 | CYP72A | KP337676 | 512 | 9.03 | 58.1 | S |
| 42 | SmCYP72A330 | non-A | 72 | CYP72 | CYP72A | KP337677 | 517 | 9.1 | 59.1 | S |
| 43 | SmCYP72A331 | non-A | 72 | CYP72 | CYP72A | KP337678 | 516 | 8.72 | 59.0 | S |
| 44 | SmCYP734A33 | non-A | 72 | CYP734 | CYP734A | KP337761 | 522 | 9.1 | 59.6 | S |
| 45 | SmCYP749A37 | non-A | 72 | CYP749 | CYP749A | KP37765 | 508 | 8.95 | 58.3 | S |
| 46 | SmCYP749A38 | non-A | 72 | CYP749 | CYP749A | KP337766 | 508 | 9.25 | 58.4 | S |
| 47 | SmCYP721A38 | non-A | 72 | CYP721 | CYP721A | KP337758 | 506 | 8.93 | 58.3 | S |
| 48 | SmCYP749A39 | non-A | 72 | CYP749 | CYP749A | KP337767 | 511 | 9.14 | 58.5 | S |
| 49 | SmCYP749A40 | non-A | 72 | CYP749 | CYP749A | KP337768 | 509 | 9 | 57.9 | S |
| 50 | SmCYP727B10 | non-A | 727 | CYP727 | CYP727B | KP337759 | 502 | 8.59 | 56.4 | S |
| 51 | SmCYP714G13 | non-A | 72 | CYP714 | CYP714G | KP337752 | 506 | 9.34 | 56.4 | S |
| 52 | SmCYP714G14 | non-A | 72 | CYP714 | CYP714G | KP337753 | 514 | 9.16 | 57.5 | S |
| 53 | SmCYP736A121 | A | 71 | CYP736 | CYP736A | KP337762 | 496 | 6.72 | 56.4 | * |
| 54 | SmCYP736A122 | A | 71 | CYP736 | CYP736A | KP337763 | 502 | 6.82 | 57.1 | * |
| 55 | SmCYP736A123 | A | 71 | CYP736 | CYP736A | KP337764 | 488 | 7.07 | 55.3 | * |
| 56 | SmCYP74A1 | non-A | 74 | CYP74 | CYP74A | KP337680 | 519 | 8.88 | 58.0 | C |
| 57 | SmCYP74B21 | non-A | 74 | CYP74 | CYP74B | KP337681 | 483 | 5.91 | 53.9 | * |
| 58 | SmCYP75B79 | A | 71 | CYP75 | CYP75B | KP337683 | 511 | 7.73 | 56.2 | * |
| 59 | SmCYP75B80 | A | 71 | CYP75 | CYP75B | KP337684 | 514 | 7.3 | 56.5 | * |
| 60 | SmCYP92B28 | A | 71 | CYP92 | CYP92B | KP337721 | 501 | 6.55 | 56.5 | S |
| 61 | SmCYP75A57 | A | 71 | CYP75 | CYP75A | KP337682 | 516 | 8.43 | 57.6 | S |
| 62 | SmCYP92A73 | A | 71 | CYP92 | CYP92A | KP337720 | 509 | 8.93 | 57.9 | * |
| 63 | SmCYP92B29 | A | 71 | CYP92 | CYP92B | KP337722 | 509 | 6.69 | 57.7 | * |
| 64 | SmCYP76AH1 | A | 71 | CYP76 | CYP76AH | KP337687 | 495 | 7.73 | 55.5 | * |
| 65 | SmCYP76AK2 | A | 71 | CYP76 | CYP76AK | KP337688 | 494 | 8.72 | 55.8 | * |
| 66 | SmCYP76S7 | A | 71 | CYP76 | CYP76S | KP337691 | 494 | 7.67 | 55.8 | * |
| 67 | SmCYP76AK3 | A | 71 | CYP76 | CYP76AK | KP337689 | 491 | 8.85 | 55.4 | * |
| 68 | SmCYP76T27 | A | 71 | CYP76 | CYP76T | KP337692 | 486 | 8.83 | 55.0 | * |
| 69 | SmCYP76A35 | A | 71 | CYP76 | CYP76A | KP337685 | 503 | 8.25 | 57.8 | * |
| 70 | SmCYP76A36 | A | 71 | CYP76 | CYP76A | KP337686 | 513 | 8.9 | 57.7 | * |
| 71 | SmCYP77A27 | A | 71 | CYP77 | CYP77A | KP337693 | 512 | 9.13 | 57.6 | S |
| 72 | SmCYP77A28 | A | 71 | CYP77 | CYP77A | KP337694 | 505 | 9.16 | 56.8 | * |
| 73 | SmCYP78A113 | A | 71 | CYP78 | CYP78A | KP337695 | 511 | 8.61 | 57.3 | S |
| 74 | SmCYP78A114 | A | 71 | CYP78 | CYP78A | KP337696 | 533 | 9.24 | 59.1 | * |
| 75 | SmCYP78A115 | A | 71 | CYP78 | CYP78A | KP337697 | 526 | 9.1 | 57.9 | S |
| 76 | SmCYP79D40 | A | 71 | CYP79 | CYP79D | KP337698 | 522 | 8.98 | 58.7 | S |
| 77 | SmCYP81Q40 | A | 71 | CYP81 | CYP81Q | KP337702 | 493 | 7.3 | 55.8 | * |
| 78 | SmCYP81B61 | A | 71 | CYP81 | CYP81B | KP337699 | 510 | 8.9 | 58.1 | S |
| 79 | SmCYP81B62 | A | 71 | CYP81 | CYP81B | KP337700 | 498 | 7.68 | 55.9 | S |
| 80 | SmCYP81Q41 | A | 71 | CYP81 | CYP81Q | KP337703 | 494 | 7.68 | 56.0 | * |
| 81 | SmCYP81Q42 | A | 71 | CYP81 | CYP81Q | KP337704 | 493 | 6.27 | 56.1 | * |
| 82 | SmCYP81Q43 | A | 71 | CYP81 | CYP81Q | KP337705 | 494 | 7.68 | 56.0 | * |
| 83 | SmCYP81C16 | A | 71 | CYP81 | CYP81C | KP337701 | 498 | 8.07 | 55.8 | S |
| 84 | SmCYP82V2 | A | 71 | CYP82 | CYP82V | KP337709 | 534 | 6.61 | 60.2 | S |
| 85 | SmCYP82D70 | A | 71 | CYP82 | CYP82D | KP337706 | 516 | 8.9 | 57.6 | * |
| 86 | SmCYP82D71 | A | 71 | CYP82 | CYP82D | KP337707 | 516 | 6.59 | 57.4 | S |
| 87 | SmCYP82U4 | A | 71 | CYP82 | CYP82U | KP337708 | 522 | 7.71 | 58.8 | S |
| 88 | SmCYP71AT89 | A | 71 | CYP71 | CYP71AT | KP337659 | 499 | 8.87 | 56.1 | * |
| 89 | SmCYP71AT90 | A | 71 | CYP71 | CYP71AT | KP337660 | 496 | 7.69 | 55.6 | * |
| 90 | SmCYP71AT91 | A | 71 | CYP71 | CYP71AT | KP337661 | 506 | 8.44 | 56.7 | * |
| 91 | SmCYP71AT92 | A | 71 | CYP71 | CYP71AT | KP337662 | 506 | 6.15 | 57.4 | S |
| 92 | SmCYP71AT93 | A | 71 | CYP71 | CYP71AT | KP337663 | 491 | 9.05 | 55.3 | * |
| 93 | SmCYP84A60 | A | 71 | CYP84 | CYP84A | KP337710 | 517 | 5.68 | 58.0 | S |
| 94 | SmCYP84A61 | A | 71 | CYP84 | CYP84A | KP337711 | 517 | 6.61 | 58.0 | S |
| 95 | SmCYP85A1 | non-A | 85 | CYP85 | CYP85A | KP337712 | 463 | 8.88 | 53.3 | S |
| 96 | SmCYP86A91 | non-A | 86 | CYP86 | CYP86A | KP337713 | 555 | 8.48 | 62.3 | S |
| 97 | SmCYP86A92 | non-A | 86 | CYP86 | CYP86A | KP337714 | 525 | 8.28 | 59.6 | S |
| 98 | SmCYP96A84 | non-A | 86 | CYP96 | CYP96A | KP337730 | 485 | 8.96 | 55.0 | S |
| 99 | SmCYP96A85 | non-A | 86 | CYP96 | CYP96A | KP337731 | 502 | 8.42 | 57.8 | * |
| 100 | SmCYP88A52 | non-A | 85 | CYP88 | CYP88A | KP337715 | 487 | 9.26 | 56.2 | S |
| 101 | SmCYP89A115 | A | 71 | CYP89 | CYP89A | KP337716 | 500 | 7.66 | 57.7 | S |
| 102 | SmCYP90A39 | non-A | 85 | CYP90 | CYP90A | KP337717 | 478 | 9.12 | 54.4 | * |
| 103 | SmCYP90B26 | non-A | 85 | CYP90 | CYP90B | KP337718 | 476 | 9.05 | 53.9 | S |
| 104 | SmCYP90C19 | non-A | 85 | CYP90 | CYP90C | KP337719 | 488 | 8.4 | 55.5 | S |
| 105 | SmCYP94A48 | non-A | 86 | CYP94 | CYP94A | KP337724 | 502 | 8.85 | 57.7 | S |
| 106 | SmCYP94A49 | non-A | 86 | CYP94 | CYP94A | KP337725 | 502 | 8.6 | 57.1 | S |
| 107 | SmCYP94B50 | non-A | 86 | CYP94 | CYP94B | KP337726 | 505 | 8.89 | 56.1 | S |
| 108 | SmCYP94C54 | non-A | 86 | CYP94 | CYP94C | KP337727 | 491 | 7.63 | 55.1 | S |
| 109 | SmCYP94C55 | non-A | 86 | CYP94 | CYP94C | KP337728 | 488 | 8.45 | 56.2 | S |
| 110 | SmCYP94D47 | non-A | 86 | CYP94 | CYP94D | KP337729 | 501 | 9.02 | 57.1 | * |
| 111 | SmCYP97A41 | non-A | 97 | CYP97 | CYP97A | KP337732 | 612 | 5.89 | 68.6 | C |
| 112 | SmCYP97B34 | non-A | 97 | CYP97 | CYP97B | KP337733 | 582 | 6.31 | 65.0 | C |
| 113 | SmCYP97C28 | non-A | 97 | CYP97 | CYP97C | KP337734 | 542 | 6.12 | 60.1 | C |
| 114 | SmCYP98A78 | A | 71 | CYP98 | CYP98A | KP337738 | 508 | 8.48 | 57.6 | S |
| 115 | SmCYP76G16 | A | 71 | CYP76 | CYP76G | KP337690 | 508 | 8.5 | 57.0 | * |
| 116 | SmCYP71AU53 | A | 71 | CYP71 | CYP71AU | KP337666 | 498 | 9.37 | 56.6 | * |