Literature DB >> 25800778

Quantitative Dynamics of Chromatin Remodeling during Germ Cell Specification from Mouse Embryonic Stem Cells.

Kazuki Kurimoto1, Yukihiro Yabuta2, Katsuhiko Hayashi3, Hiroshi Ohta2, Hiroshi Kiyonari4, Tadahiro Mitani5, Yoshinobu Moritoki6, Kenjiro Kohri7, Hiroshi Kimura8, Takuya Yamamoto9, Yuki Katou10, Katsuhiko Shirahige10, Mitinori Saitou11.   

Abstract

Germ cell specification is accompanied by epigenetic remodeling, the scale and specificity of which are unclear. Here, we quantitatively delineate chromatin dynamics during induction of mouse embryonic stem cells (ESCs) to epiblast-like cells (EpiLCs) and from there into primordial germ cell-like cells (PGCLCs), revealing large-scale reorganization of chromatin signatures including H3K27me3 and H3K9me2 patterns. EpiLCs contain abundant bivalent gene promoters characterized by low H3K27me3, indicating a state primed for differentiation. PGCLCs initially lose H3K4me3 from many bivalent genes but subsequently regain this mark with concomitant upregulation of H3K27me3, particularly at developmental regulatory genes. PGCLCs progressively lose H3K9me2, including at lamina-associated perinuclear heterochromatin, resulting in changes in nuclear architecture. T recruits H3K27ac to activate BLIMP1 and early mesodermal programs during PGCLC specification, which is followed by BLIMP1-mediated repression of a broad range of targets, possibly through recruitment and spreading of H3K27me3. These findings provide a foundation for reconstructing regulatory networks of the germline epigenome.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25800778     DOI: 10.1016/j.stem.2015.03.002

Source DB:  PubMed          Journal:  Cell Stem Cell        ISSN: 1875-9777            Impact factor:   24.633


  74 in total

1.  Foxd3 Promotes Exit from Naive Pluripotency through Enhancer Decommissioning and Inhibits Germline Specification.

Authors:  Patricia Respuela; Miloš Nikolić; Minjia Tan; Peter Frommolt; Yingming Zhao; Joanna Wysocka; Alvaro Rada-Iglesias
Journal:  Cell Stem Cell       Date:  2016-01-07       Impact factor: 24.633

Review 2.  Repression of somatic cell fate in the germline.

Authors:  Valérie J Robert; Steve Garvis; Francesca Palladino
Journal:  Cell Mol Life Sci       Date:  2015-06-05       Impact factor: 9.261

Review 3.  The interplay of epigenetic marks during stem cell differentiation and development.

Authors:  Yaser Atlasi; Hendrik G Stunnenberg
Journal:  Nat Rev Genet       Date:  2017-08-14       Impact factor: 53.242

4.  Accurate annotation of accessible chromatin in mouse and human primordial germ cells.

Authors:  Jingyi Li; Shijun Shen; Jiayu Chen; Wenqiang Liu; Xiaocui Li; Qianshu Zhu; Beiying Wang; Xiaolong Chen; Li Wu; Mingzhu Wang; Liang Gu; Hong Wang; Jiqing Yin; Cizhong Jiang; Shaorong Gao
Journal:  Cell Res       Date:  2018-10-10       Impact factor: 25.617

5.  Intragenic Deletions May Involve Enhancer Sequences and Alter CNTNAP2 Expression.

Authors:  Martin Poot
Journal:  Mol Syndromol       Date:  2018-05-09

6.  Parallel evolution of male germline epigenetic poising and somatic development in animals.

Authors:  Bluma J Lesch; Sherman J Silber; John R McCarrey; David C Page
Journal:  Nat Genet       Date:  2016-06-13       Impact factor: 38.330

Review 7.  Of Mice and Men: In Vivo and In Vitro Studies of Primordial Germ Cell Specification.

Authors:  Deepti Lava Kumar; Tony DeFalco
Journal:  Semin Reprod Med       Date:  2017-03-09       Impact factor: 1.303

8.  Tet-Mediated DNA Demethylation Is Required for SWI/SNF-Dependent Chromatin Remodeling and Histone-Modifying Activities That Trigger Expression of the Sp7 Osteoblast Master Gene during Mesenchymal Lineage Commitment.

Authors:  Hugo Sepulveda; Alejandro Villagra; Martin Montecino
Journal:  Mol Cell Biol       Date:  2017-09-26       Impact factor: 4.272

9.  PRDM1 controls the sequential activation of neural, neural crest and sensory progenitor determinants.

Authors:  Ravindra S Prajapati; Mark Hintze; Andrea Streit
Journal:  Development       Date:  2019-12-16       Impact factor: 6.868

10.  In vitro capture and characterization of embryonic rosette-stage pluripotency between naive and primed states.

Authors:  Alex Neagu; Emiel van Genderen; Irene Escudero; Lucas Verwegen; Dorota Kurek; Johannes Lehmann; Jente Stel; René A M Dirks; Guido van Mierlo; Alex Maas; Cindy Eleveld; Yang Ge; Alexander T den Dekker; Rutger W W Brouwer; Wilfred F J van IJcken; Miha Modic; Micha Drukker; Joop H Jansen; Nicolas C Rivron; Esther B Baart; Hendrik Marks; Derk Ten Berge
Journal:  Nat Cell Biol       Date:  2020-05-04       Impact factor: 28.824

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