| Literature DB >> 25794106 |
George Notas1, Michail Bariotakis2, Vaios Kalogrias2, Maria Andrianaki3, Kalliopi Azariadis3, Errika Kampouri3, Katerina Theodoropoulou3, Katerina Lavrentaki3, Stelios Kastrinakis4, Marilena Kampa3, Panagiotis Agouridakis5, Stergios Pirintsos6, Elias Castanas3.
Abstract
Severe allergic reactions of unknown etiology,necessitating a hospital visit, have an important impact in the life of affected individuals and impose a major economic burden to societies. The prediction of clinically severe allergic reactions would be of great importance, but current attempts have been limited by the lack of a well-founded applicable methodology and the wide spatiotemporal distribution of allergic reactions. The valid prediction of severe allergies (and especially those needing hospital treatment) in a region, could alert health authorities and implicated individuals to take appropriate preemptive measures. In the present report we have collecterd visits for serious allergic reactions of unknown etiology from two major hospitals in the island of Crete, for two distinct time periods (validation and test sets). We have used the Normalized Difference Vegetation Index (NDVI), a satellite-based, freely available measurement, which is an indicator of live green vegetation at a given geographic area, and a set of meteorological data to develop a model capable of describing and predicting severe allergic reaction frequency. Our analysis has retained NDVI and temperature as accurate identifiers and predictors of increased hospital severe allergic reactions visits. Our approach may contribute towards the development of satellite-based modules, for the prediction of severe allergic reactions in specific, well-defined geographical areas. It could also probably be used for the prediction of other environment related diseases and conditions.Entities:
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Year: 2015 PMID: 25794106 PMCID: PMC4368791 DOI: 10.1371/journal.pone.0121475
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Representative seasonal variation of NDVI measurements for 2007–2008 in the Heraklion-Prefecture.
NDVI values follow a 15 or 16 days temporal resolution. Figure was generated using ArcGIS v.8.0 and NDVI values are freely available from the MODIS web (http://modis.gsfc.nasa.gov/).
Fig 2Graphical presentation of the frequency of emergency department (ED) visits at the Heraklion metropolitan area (solid line) and model fit of the NT Model, that is derived from NDVI and temperature (dotted line) (A) and the SAT Model Assemblage, from NDVI and satellite collected Land Surface Temperature (B).
See Material and Methods for the development of the models. It should be noted that while the raw output of the models is pi, i.e. the proportion of the total population that performed ED visits, results are presented as counts (pi × N), for ease of interpretation in the Fig. 2 and subsequent Figs. 3–4.
Description of models used for allergy description.
| Number of base variables in model | Null Model | 1 | 2 | 3 (NT) | 4 to 8 | 9 |
|---|---|---|---|---|---|---|
| AIC | 170.0261 | 191.6104 | 169.2 |
| 154.7354 | 156 |
| MAE | 0.2398636 | 0.2693172 | 0.221505 |
| 0.09861414 | 0.1198496 |
| (Intercept) | −9.245228 | −10.820534 | 3.32×102 | −9.8488923 | −7.772586 | |
| Ndvi | − | −3.527386 | ||||
| Tmean | −0.631477 | −5.11 | −0.7819236 | −0.815993 | ||
| Tmax | 0.034927 | 0.564828 | −25.5 | 0.6417735 | 0.598364 | |
| Rain | −0.0067363 | −0.008827 | ||||
| We | 1.6234941 | |||||
| ndvi2 |
| |||||
| tmean2 | −1.62×10-1 | |||||
| tmax2 | −0.013613 | 4.73×10-1 | −0.016637 | −0.015449 | ||
| tmax× ndvi | 5.91×10-1 | |||||
| tmean× tmax | 0.017759 | 7.60×10-1 | 0.0220229 | 0.021767 | ||
| tmean× tmax2 | − | |||||
| tmean2× tmax2 |
| |||||
| ndvi× tmax2 | −6.79×10-1 | |||||
| tmax× ndvi2 | −39.3 | |||||
| tmax2× we | −0.0016847 |
In the upper part of the Table the Akaike Information Criterion (AIC) and the Mean Absolute Error (MAE) are presented. In the lower part, the corresponding coefficients for the different retained variables for each model are shown. Significant values for the retained model are shown in bold. Abbreviations: ndvi, Normalized Difference Vegetation Index; tmean, mean daily temperature; tmax, maximum daily temperature; rain, daily rainfall; we, wind eastness. Squares of each factor are represented with the 2 symbol, interactions are represented with the × symbol, in column 1. For the retained NT model (in bold) the most significant retained parameters are shown in bold characters.
Fig 3Upper Panels.
Predictive value of the retained NT model. Employing a leave-one-out procedure, we attempted to identify whether our models could predict the frequency of emergency department (ED) visits in the metropolitan area of Heraklion. The predictive ability of the NT model, taking into account the ground temperatures (A) was very good, while the SAT model (B), integrating satellite temperature measurements was less performant. Periods refere to half month time-intervals, with the first referring to September 1–15 2007. Lower Panels. Validation of the NT model for severe allergy prediction. In order to validate our NT Model we analyzed a second data-set for the Heraklion metropolitan area (2009–2010) using the same model averaging technique and using the same environmental/meteorological parameters (NDVI, temperature; NT model). Development of the new NT model, based on the same base variables presented a very good model fit both at the Heraklion (C) and at the Chania area (D).
Fig 4Graphical presentation of the frequency of patients from the regional area of Heraklion, positive for specific IgE, refered to the University Hospital of Heraklion (solid line) and model fit of the NT Model (dotted line).