Literature DB >> 25785945

Next-generation sequencing for mutation detection in heritable skin diseases: the paradigm of pseudoxanthoma elasticum.

Andrew P South1, Qiaoli Li1, Jouni Uitto2.   

Abstract

Next-generation sequencing applied either to the entire genome or to a subset, such as a whole exome, has revolutionized the search for pathogenic mutations in heritable diseases, including genodermatoses. In this issue, Hosen et al. applied whole-exome sequencing to identify potential pathogenic mutations in four candidate genes associated with pseudoxanthoma elasticum, the prototype of ectopic mineralization disorders. The study highlights the advantages of this approach over traditional Sanger sequencing, including expedience and cost, but it also illustrates some of the challenges encountered in implementing this rapidly evolving technology.

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Year:  2015        PMID: 25785945     DOI: 10.1038/jid.2014.521

Source DB:  PubMed          Journal:  J Invest Dermatol        ISSN: 0022-202X            Impact factor:   8.551


  20 in total

Review 1.  Sequencing technologies - the next generation.

Authors:  Michael L Metzker
Journal:  Nat Rev Genet       Date:  2009-12-08       Impact factor: 53.242

Review 2.  Mineralization/anti-mineralization networks in the skin and vascular connective tissues.

Authors:  Qiaoli Li; Jouni Uitto
Journal:  Am J Pathol       Date:  2013-05-08       Impact factor: 4.307

3.  Pseudoxanthoma elasticum: progress in research toward treatment: summary of the 2012 PXE international research meeting.

Authors:  Jouni Uitto; Andras Váradi; Lionel Bercovitch; Patrick F Terry; Sharon F Terry
Journal:  J Invest Dermatol       Date:  2013-06       Impact factor: 8.551

4.  Evolution and functional impact of rare coding variation from deep sequencing of human exomes.

Authors:  Jacob A Tennessen; Abigail W Bigham; Timothy D O'Connor; Wenqing Fu; Eimear E Kenny; Simon Gravel; Sean McGee; Ron Do; Xiaoming Liu; Goo Jun; Hyun Min Kang; Daniel Jordan; Suzanne M Leal; Stacey Gabriel; Mark J Rieder; Goncalo Abecasis; David Altshuler; Deborah A Nickerson; Eric Boerwinkle; Shamil Sunyaev; Carlos D Bustamante; Michael J Bamshad; Joshua M Akey
Journal:  Science       Date:  2012-05-17       Impact factor: 47.728

Review 5.  Progress in heritable skin diseases: translational implications of mutation analysis and prospects of molecular therapies*.

Authors:  Jouni Uitto
Journal:  Acta Derm Venereol       Date:  2009       Impact factor: 4.437

6.  Pseudoxanthoma elasticum: molecular genetics and putative pathomechanisms.

Authors:  Jouni Uitto; Qiaoli Li; Qiujie Jiang
Journal:  J Invest Dermatol       Date:  2009-12-24       Impact factor: 8.551

7.  PSEUDOXANTHOMA ELASTICUM: DIAGNOSTIC FEATURES, CLASSIFICATION, AND TREATMENT OPTIONS.

Authors:  Jouni Uitto; Qiujie Jiang; András Váradi; Lionel G Bercovitch; Sharon F Terry
Journal:  Expert Opin Orphan Drugs       Date:  2014-06-01       Impact factor: 0.694

8.  Generalized arterial calcification of infancy and pseudoxanthoma elasticum: two sides of the same coin.

Authors:  Yvonne Nitschke; Frank Rutsch
Journal:  Front Genet       Date:  2012-12-24       Impact factor: 4.599

9.  Decoding long nanopore sequencing reads of natural DNA.

Authors:  Andrew H Laszlo; Ian M Derrington; Brian C Ross; Henry Brinkerhoff; Andrew Adey; Ian C Nova; Jonathan M Craig; Kyle W Langford; Jenny Mae Samson; Riza Daza; Kenji Doering; Jay Shendure; Jens H Gundlach
Journal:  Nat Biotechnol       Date:  2014-06-25       Impact factor: 54.908

10.  NOTCH1 mutations occur early during cutaneous squamous cell carcinogenesis.

Authors:  Charlotte M Proby; Catherine A Harwood; Irene M Leigh; Andrew P South; Karin J Purdie; Stephen A Watt; Sam Haldenby; Nicoline den Breems; Michelle Dimon; Sarah T Arron; Michael J Kluk; Jon C Aster; Angela McHugh; Dylan J Xue; Jasbani Hs Dayal; Kim S Robinson; Sm Hasan Rizvi
Journal:  J Invest Dermatol       Date:  2014-03-24       Impact factor: 8.551

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  2 in total

1.  Infantile hemangioma: factors causing recurrence after propranolol treatment.

Authors:  Lei Chang; Dongze Lv; Zhang Yu; Gang Ma; Hanru Ying; Yajing Qiu; Yifei Gu; Yunbo Jin; Hui Chen; Xiaoxi Lin
Journal:  Pediatr Res       Date:  2017-10-11       Impact factor: 3.756

2.  Advances and Applications of Ion Torrent Personal Genome Machine in Cutaneous Squamous Cell Carcinoma Reveal Novel Gene Mutations.

Authors:  Yu-Ping Hsiao; Chun-Te Lu; Ju Chang-Chien; Wan-Ru Chao; Jiann-Jou Yang
Journal:  Materials (Basel)       Date:  2016-06-14       Impact factor: 3.623

  2 in total

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