| Literature DB >> 25785276 |
Chia-Hung Lin1, Yun-Shien Lee2, Yu-Yao Huang3, Sheng-Hwu Hsieh3, Zih-Syuan Chen4, Chi-Neu Tsai4.
Abstract
AIM: The relationship between genetic polymorphisms of the glucagon-like peptide-1 (GLP-1) receptor (GLP1R) gene and unresponsiveness to GLP-1 analogue treatment in patients with poorly controlled type 2 diabetes mellitus (DM) is unclear.Entities:
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Year: 2015 PMID: 25785276 PMCID: PMC4345081 DOI: 10.1155/2015/176949
Source DB: PubMed Journal: J Diabetes Res Impact factor: 4.011
Clinical variables of all participants with GLP-1 analogue.
| Variable | Baseline | End of the study |
|
|---|---|---|---|
|
| 36 | ||
| Age (years old) | 52.8 ± 2.4 | ||
| Sex (female %) | 44 | ||
| BMI (kg/m2) | 28.87 ± 0.83 | ||
| DM duration (years) | 11.6 ± 1.3 | ||
| A1C (%) | 10.5 ± 0.2 | ||
| A1C (mmol/mol) | 91.3 ± 2.5 | ||
| Fasting C-peptide (ng/mL) | 1.68 ± 0.26 | 1.88 ± 0.27 | 0.353 |
| Fasting insulin (mU/L) | 31.85 ± 9.33 | 31.52 ± 15.50 | 0.971 |
| Mean glucose (mg/dL) | 180.2 ± 5.4 | 147.9 ± 3.8 | <0.001* |
| SDPG (mg/dL) | 65.1 ± 3.3 | 50.7 ± 3.0 | <0.001* |
| MAGE (mg/dL) | 123.9 ± 6.5 | 98.8 ± 6.4 | 0.001* |
| HOMA-IR | 15.23 ± 4.32 | 11.88 ± 6.00 | 0.343 |
| ISI | 4.43 ± 1.03 | 5.03 ± 0.80 | 0.570 |
Data are expressed as mean ± standard error mean.
SDPG: standard deviation of plasma glucose.
MAGE: mean amplitude of glycemic excursions.
HOMA-IR: homeostasis model assessment-insulin resistance.
ISI: insulin sensitivity index.
* P < 0.01 by paired-t test.
Figure 1Experimental confirmation of the dinucleotide repeat polymorphism. A 2 bp deletion at chromosome 6: 39047037-39047052 was detected. (a) PCR direct sequencing chromatography trace. (b), (c) The PCR products were cloned, and at least 10 single colonies were analyzed by DNA sequencing. One plasmid contained the wild type sequence ((b), 8GA), whereas the other plasmids contained a deletion of GA ((c), 7GA). The underlined sequences indicate the one unit of the GA sequences.
The frequencies of missense and silent variants in 36 patients type 2 diabetic subjects.
| Marker | Locus | Type/function | MAF | Genotype | Frequency |
|---|---|---|---|---|---|
| rs3765467 | Exon 4 | SNP/missense | 0.194 (0.065) | C/T | 58/14 |
| CC/CT/TT | 25/8/3 | ||||
|
| |||||
| rs761386 | Intron between Exons 9 and 10 | SNP | 0.222 (0.103) | C/T | 56/16 |
| CC/CT/TT | 22/12/2 | ||||
|
| |||||
| rs5875654 | Intron between Exons 10 and 11 | InDel | 0.222 (0.146) | 8/7 GA | 56/16 |
| 88/78/77 GA | 22/12/2 | ||||
MAF = minor allele frequency. Bracketed values refer to MAF from HapMap-CHB populations or 1000 Genomes.
STR = short tandem repeat.
Figure 2Quantitative trait loci analysis of GLP1R gene variations with clinical response to the GLP-1 analogue. (a)-(b) Baseline. (c)-(d) Treatment. (e)-(f) Change. SDPGbaseline: the standard deviation of plasma glucose at baseline. SDPGtreatment with the GLP-1 analogue: the standard deviation of plasma glucose after treatment with GLP-1 analogue. SDPG change: the change of standard deviation of plasma glucose (SDPGbaseline − SDPGtreatment with the GLP-1 analogue).
Quantitative trait loci analysis of GLP1R gene variations with clinical response to the GLP-1 analogue by multiple linear regression analyses using additive genetic models with or without adjustment of co-valuables, including age, sex, BMI, DM duration, and glycemic states at baseline.
| Gene variants (genotypes) | Clinical variables | Without adjustment | With adjustment | ||
|---|---|---|---|---|---|
| Coefficient (95% CI) |
| Coefficient (95% CI) |
| ||
| rs3765467 | Mean glucose_baseline | −1.604 (−18.944, 15.737) | 0.852 | −0.161 (−19.825, 19.502) | 0.987 |
| Treatment | 4.091 (−8.100, 16.282) | 0.500 | 14.353 (4.202, 24.504) | 0.007 | |
| Change | −5.695 (−21.292, 9.902) | 0.463 | −14.514 (−32.324, 3.295) | 0.106 | |
| MAGE_baseline | −7.464 (−28.355, 13.427) | 0.473 | −8.870 (−31.366, 13.626) | 0.427 | |
| Treatment | 5.453 (−15.296, 26.202) | 0.597 | 13.222 (−10.084, 36.528) | 0.255 | |
| Change | −12.917 (−34.013, 8.179) | 0.222 | −22.092 (−46.635, 2.451) | 0.076 | |
| SDPG_baseline | −5.421 (−16.067, 5.224) | 0.308 | −7.647 (−19.858, 4.564) | 0.210 | |
| Treatment | 6.073 (−3.538, 15.684) | 0.208 | 10.588 (0.779, 20.398) | 0.035 | |
| Change | −11.494 (−21.161, −1.828) | 0.021 | −18.236 (−29.143, −7.328) | 0.002 | |
|
| |||||
| rs761386 | Mean glucose_baseline | −9.257 (−27.350, 8.835) | 0.306 | −2.968 (−22.396, 16.460) | 0.757 |
| Treatment | −7.850 (−20.561, 4.861) | 0.218 | −1.868 (−13.249, 9.513) | 0.739 | |
| Change | −1.407 (−18.054, 15.240) | 0.865 | −1.100 (−19.545, 17.346) | 0.904 | |
| MAGE_baseline | 0.828 (−21.470, 23.126) | 0.940 | 7.109 (−15.240, 29.459) | 0.520 | |
| Treatment | −6.806 (−28.748, 15.137) | 0.533 | −7.774 (−31.184, 15.635) | 0.502 | |
| Change | 7.634 (−15.061, 30.329) | 0.499 | 14.884 (−10.156, 39.923) | 0.234 | |
| SDPG_baseline | 8.493 (−2.571, 19.557) | 0.128 | 10.451 (−1.319, 22.222) | 0.080 | |
| Treatment | −3.737 (−14.079, 6.605) | 0.468 | −3.083 (−13.510, 7.344) | 0.550 | |
| Change | 12.230 (1.998, 22.462) | 0.021 | 13.534 (1.826, 25.243) | 0.025 | |
SDPG: standard deviation of plasma glucose.
MAGE: mean amplitude of glycemic excursions.
CI: confidence interval.
Figure 3Effects of GLP1R genotype and time on the glucose (a)-(b), insulin (c)-(d), and C-peptide (e)-(f) levels of 75 g OGTT post GLP-1 analogue treatment. * P = 0.032 versus the time-matched genotype CC group.
Quantitative trait loci analysis of GLP1R gene variations with 75 g OGTT response to the GLP-1 analogue by multiple linear regression analyses using additive genetic models with or without adjustment of co-valuables, including age, sex, BMI, DM duration, and glycemic states at baseline.
| Gene variants (genotypes) | 75 g OGTT variables | Without adjustment | With adjustment | ||
|---|---|---|---|---|---|
| Coefficient (95% CI) |
| Coefficient (95% CI) |
| ||
| rs3765467 | Glucose_0 minutes | −2.969 (−21.346, 15.409) | 0.743 | 3.705 (−17.762, 25.172) | 0.724 |
| 30 minutes | −1.500 (−40.962, 37.962) | 0.938 | 3.210 (−47.712, 54.132) | 0.897 | |
| 60 minutes | 2.250 (−53.419, 57.919) | 0.935 | 5.139 (−66.086, 76.364) | 0.883 | |
| 90 minutes | −15.344 (−69.476, 38.788) | 0.566 | −19.554 (−89.583, 50.475) | 0.569 | |
| 120 minutes | −31.094 (−80.241, 18.053) | 0.206 | −38.048 (−100.420, 24.324) | 0.220 | |
| C-peptide_0 minutes | −0.151 (−1.102, 0.800) | 0.747 | −0.029 (−1.064, 1.007) | 0.955 | |
| 30 minutes | −0.085 (−1.149, 0.978) | 0.871 | −0.021 (−1.185, 1.142) | 0.970 | |
| 60 minutes | −0.521 (−1.821, 0.779) | 0.419 | −0.336 (−1.774, 1.101) | 0.633 | |
| 90 minutes | −0.457 (−2.379, 1.466) | 0.630 | −0.584 (−2.807, 1.638) | 0.592 | |
| 120 minutes | −1.257 (−3.677, 1.164) | 0.297 | −1.392 (−4.231, 1.447) | 0.321 | |
| Insulin_0 minutes | −17.459 (−81.946, 47.027) | 0.584 | −1.133 (−83.148, 80.882) | 0.977 | |
| 30 minutes | −18.566 (−82.716, 45.585) | 0.558 | −2.694 (−84.957, 79.569) | 0.947 | |
| 60 minutes | −22.191 (−87.217, 42.835) | 0.490 | −3.985 (−87.257, 79.287) | 0.922 | |
| 90 minutes | −26.144 (−105.761, 53.474) | 0.507 | −6.281 (−108.580, 96.019) | 0.900 | |
| 120 minutes | −34.109 (−121.846, 53.627) | 0.433 | −12.734 (−125.719, 100.251) | 0.818 | |
|
| |||||
| rs761386 | Glucose_0 minutes | −1.435 (−19.160, 16.290) | 0.869 | 1.141 (−18.552, 20.834) | 0.906 |
| 30 minutes | 12.957 (−24.721, 50.634) | 0.704 | 10.326 (−36.077, 56.729) | 0.650 | |
| 60 minutes | 20.174 (−32.875, 73.222) | 0.443 | 10.244 (−54.816, 75.304) | 0.748 | |
| 90 minutes | 20.826 (−30.997, 72.650) | 0.417 | 18.288 (−45.775, 82.352) | 0.561 | |
| 120 minutes | 23.826 (−24.025, 71.677) | 0.316 | 36.804 (−20.040, 93.649) | 0.194 | |
| C-peptide_0 minutes | −0.083 (−1.000, 0.834) | 0.854 | 0.044 (−0.904, 0.991) | 0.925 | |
| 30 minutes | 0.129 (−0.894, 1.152) | 0.798 | −0.073 (−1.137, 0.991) | 0.889 | |
| 60 minutes | 0.519 (−0.732, 1.770) | 0.403 | 0.159 (−1.162, 1.480) | 0.806 | |
| 90 minutes | 0.542 (−1.305, 2.390) | 0.553 | −0.022 (−2.069, 2.024) | 0.982 | |
| 120 minutes | 0.953 (−1.396, 3.302) | 0.413 | 0.375 (−2.276, 3.026) | 0.773 | |
| Insulin_0 minutes | −27.735 (−89.251, 33.781) | 0.364 | −25.685 (−99.916, 48.546) | 0.481 | |
| 30 minutes | −21.800 (−83.393, 39.793) | 0.474 | −22.497 (−97.156, 52.161) | 0.539 | |
| 60 minutes | −17.687 (−80.485, 45.111) | 0.569 | −18.393 (−94.197, 57.411) | 0.620 | |
| 90 minutes | −20.765 (−97.642, 56.111) | 0.584 | −21.338 (−114.531, 71.856) | 0.640 | |
| 120 minutes | −21.678 (−106.715, 63.358) | 0.606 | −24.492 (−127.466, 78.483) | 0.627 | |
OGTT: oral glucose tolerance test.
DM: diabetes mellitus.
BMI: body mass index.
Genetic variations of GLP1R studied in published experiments.
| dbSNP rs# cluster ID | Region | Chromosome position* | Heterozygosity | MAF | Function |
|---|---|---|---|---|---|
| rs6923761 | Exon 4 | 39065819 | 0.121 | 0.0647 | Missense/homozygotes for the major allele associated with increase in GLP-1 response |
|
| |||||
| rs3765467 | Exon 5 | 39066296 | 0.260 | 0.1538 | Missense/heterozygotes for the minor allele associated with increase in GLP-1 response |
|
| |||||
| rs367543060 | Exon 5 | 39066240 | N.D. | N.D. | Missense/reduced GLP-1 response in |
*Chromosome position determined by GRCh38 assembly.
MAF: minor allele frequency.
N.D.: not determined.