Literature DB >> 25784503

Contribution of common non-synonymous variants in PCSK1 to body mass index variation and risk of obesity: a systematic review and meta-analysis with evidence from up to 331 175 individuals.

Kevin T Nead1, Aihua Li2, Mackenzie R Wehner3, Binod Neupane2, Stefan Gustafsson4, Adam Butterworth5, James C Engert6, A Darlene Davis7, Robert A Hegele8, Ruby Miller7, Marcel den Hoed9, Kay-Tee Khaw5, Tuomas O Kilpeläinen10, Nick Wareham11, Todd L Edwards12, Göran Hallmans13, Tibor V Varga14, Sharon L R Kardia15, Jennifer A Smith15, Wei Zhao15, Jessica D Faul16, David Weir16, Jie Mi17, Bo Xi18, Samuel Canizales Quinteros19, Cyrus Cooper20, Avan Aihie Sayer21, Karen Jameson21, Anders Grøntved22, Myriam Fornage23, Stephen Sidney24, Craig L Hanis25, Heather M Highland25, Hans-Ulrich Häring26, Martin Heni26, Jessica Lasky-Su27, Scott T Weiss27, Glenn S Gerhard28, Christopher Still29, Melkaey M Melka30, Zdenka Pausova30, Tomáš Paus31, Struan F A Grant32, Hakon Hakonarson32, R Arlen Price33, Kai Wang34, Andre Scherag35, Johannes Hebebrand36, Anke Hinney36, Paul W Franks37, Timothy M Frayling38, Mark I McCarthy39, Joel N Hirschhorn40, Ruth J Loos41, Erik Ingelsson4, Hertzel C Gerstein42, Salim Yusuf42, Joseph Beyene2, Sonia S Anand42, David Meyre43.   

Abstract

Polymorphisms rs6232 and rs6234/rs6235 in PCSK1 have been associated with extreme obesity [e.g. body mass index (BMI) ≥ 40 kg/m(2)], but their contribution to common obesity (BMI ≥ 30 kg/m(2)) and BMI variation in a multi-ethnic context is unclear. To fill this gap, we collected phenotypic and genetic data in up to 331 175 individuals from diverse ethnic groups. This process involved a systematic review of the literature in PubMed, Web of Science, Embase and the NIH GWAS catalog complemented by data extraction from pre-existing GWAS or custom-arrays in consortia and single studies. We employed recently developed global meta-analytic random-effects methods to calculate summary odds ratios (OR) and 95% confidence intervals (CIs) or beta estimates and standard errors (SE) for the obesity status and BMI analyses, respectively. Significant associations were found with binary obesity status for rs6232 (OR = 1.15, 95% CI 1.06-1.24, P = 6.08 × 10(-6)) and rs6234/rs6235 (OR = 1.07, 95% CI 1.04-1.10, P = 3.00 × 10(-7)). Similarly, significant associations were found with continuous BMI for rs6232 (β = 0.03, 95% CI 0.00-0.07; P = 0.047) and rs6234/rs6235 (β = 0.02, 95% CI 0.00-0.03; P = 5.57 × 10(-4)). Ethnicity, age and study ascertainment significantly modulated the association of PCSK1 polymorphisms with obesity. In summary, we demonstrate evidence that common gene variation in PCSK1 contributes to BMI variation and susceptibility to common obesity in the largest known meta-analysis published to date in genetic epidemiology.
© The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

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Year:  2015        PMID: 25784503      PMCID: PMC4498155          DOI: 10.1093/hmg/ddv097

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  72 in total

1.  Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.

Authors:  Lucia A Hindorff; Praveen Sethupathy; Heather A Junkins; Erin M Ramos; Jayashri P Mehta; Francis S Collins; Teri A Manolio
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-27       Impact factor: 11.205

2.  SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap.

Authors:  Andrew D Johnson; Robert E Handsaker; Sara L Pulit; Marcia M Nizzari; Christopher J O'Donnell; Paul I W de Bakker
Journal:  Bioinformatics       Date:  2008-10-30       Impact factor: 6.937

3.  Association of PCSK1 rs6234 with obesity and related traits in a Chinese Han population.

Authors:  Qibin Qi; Huaixing Li; Ruth J F Loos; Chen Liu; Frank B Hu; Hongyu Wu; Zhijie Yu; Xu Lin
Journal:  PLoS One       Date:  2010-05-17       Impact factor: 3.240

4.  Obesity as an independent risk factor for cardiovascular disease: a 26-year follow-up of participants in the Framingham Heart Study.

Authors:  H B Hubert; M Feinleib; P M McNamara; W P Castelli
Journal:  Circulation       Date:  1983-05       Impact factor: 29.690

5.  Common body mass index-associated variants confer risk of extreme obesity.

Authors:  Chris Cotsapas; Elizabeth K Speliotes; Ida J Hatoum; Danielle M Greenawalt; Radu Dobrin; Pek Y Lum; Christine Suver; Eugene Chudin; Daniel Kemp; Marc Reitman; Benjamin F Voight; Benjamin M Neale; Eric E Schadt; Joel N Hirschhorn; Lee M Kaplan; Mark J Daly
Journal:  Hum Mol Genet       Date:  2009-06-24       Impact factor: 6.150

6.  Genome-wide population-based association study of extremely overweight young adults--the GOYA study.

Authors:  Lavinia Paternoster; David M Evans; Ellen Aagaard Nohr; Claus Holst; Valerie Gaborieau; Paul Brennan; Anette Prior Gjesing; Niels Grarup; Daniel R Witte; Torben Jørgensen; Allan Linneberg; Torsten Lauritzen; Anelli Sandbaek; Torben Hansen; Oluf Pedersen; Katherine S Elliott; John P Kemp; Beate St Pourcain; George McMahon; Diana Zelenika; Jörg Hager; Mark Lathrop; Nicholas J Timpson; George Davey Smith; Thorkild I A Sørensen
Journal:  PLoS One       Date:  2011-09-15       Impact factor: 3.240

7.  Variability in the heritability of body mass index: a systematic review and meta-regression.

Authors:  Cathy E Elks; Marcel den Hoed; Jing Hua Zhao; Stephen J Sharp; Nicholas J Wareham; Ruth J F Loos; Ken K Ong
Journal:  Front Endocrinol (Lausanne)       Date:  2012-02-28       Impact factor: 5.555

8.  PCSK1 rs6232 is associated with childhood and adult class III obesity in the Mexican population.

Authors:  Marisela Villalobos-Comparán; Hugo Villamil-Ramírez; Teresa Villarreal-Molina; Elena Larrieta-Carrasco; Paola León-Mimila; Sandra Romero-Hidalgo; Leonor Jacobo-Albavera; Adriana E Liceaga-Fuentes; Francisco J Campos-Pérez; Blanca E López-Contreras; Teresa Tusié-Luna; Blanca E Del Río-Navarro; Carlos A Aguilar-Salinas; Samuel Canizales-Quinteros
Journal:  PLoS One       Date:  2012-06-21       Impact factor: 3.240

9.  A meta-analysis identifies new loci associated with body mass index in individuals of African ancestry.

Authors:  Keri L Monda; Gary K Chen; Kira C Taylor; Cameron Palmer; Todd L Edwards; Leslie A Lange; Maggie C Y Ng; Adebowale A Adeyemo; Matthew A Allison; Lawrence F Bielak; Guanjie Chen; Mariaelisa Graff; Marguerite R Irvin; Suhn K Rhie; Guo Li; Yongmei Liu; Youfang Liu; Yingchang Lu; Michael A Nalls; Yan V Sun; Mary K Wojczynski; Lisa R Yanek; Melinda C Aldrich; Adeyinka Ademola; Christopher I Amos; Elisa V Bandera; Cathryn H Bock; Angela Britton; Ulrich Broeckel; Quiyin Cai; Neil E Caporaso; Chris S Carlson; John Carpten; Graham Casey; Wei-Min Chen; Fang Chen; Yii-Der I Chen; Charleston W K Chiang; Gerhard A Coetzee; Ellen Demerath; Sandra L Deming-Halverson; Ryan W Driver; Patricia Dubbert; Mary F Feitosa; Ye Feng; Barry I Freedman; Elizabeth M Gillanders; Omri Gottesman; Xiuqing Guo; Talin Haritunians; Tamara Harris; Curtis C Harris; Anselm J M Hennis; Dena G Hernandez; Lorna H McNeill; Timothy D Howard; Barbara V Howard; Virginia J Howard; Karen C Johnson; Sun J Kang; Brendan J Keating; Suzanne Kolb; Lewis H Kuller; Abdullah Kutlar; Carl D Langefeld; Guillaume Lettre; Kurt Lohman; Vaneet Lotay; Helen Lyon; Joann E Manson; William Maixner; Yan A Meng; Kristine R Monroe; Imran Morhason-Bello; Adam B Murphy; Josyf C Mychaleckyj; Rajiv Nadukuru; Katherine L Nathanson; Uma Nayak; Amidou N'diaye; Barbara Nemesure; Suh-Yuh Wu; M Cristina Leske; Christine Neslund-Dudas; Marian Neuhouser; Sarah Nyante; Heather Ochs-Balcom; Adesola Ogunniyi; Temidayo O Ogundiran; Oladosu Ojengbede; Olufunmilayo I Olopade; Julie R Palmer; Edward A Ruiz-Narvaez; Nicholette D Palmer; Michael F Press; Evandine Rampersaud; Laura J Rasmussen-Torvik; Jorge L Rodriguez-Gil; Babatunde Salako; Eric E Schadt; Ann G Schwartz; Daniel A Shriner; David Siscovick; Shad B Smith; Sylvia Wassertheil-Smoller; Elizabeth K Speliotes; Margaret R Spitz; Lara Sucheston; Herman Taylor; Bamidele O Tayo; Margaret A Tucker; David J Van Den Berg; Digna R Velez Edwards; Zhaoming Wang; John K Wiencke; Thomas W Winkler; John S Witte; Margaret Wrensch; Xifeng Wu; James J Yang; Albert M Levin; Taylor R Young; Neil A Zakai; Mary Cushman; Krista A Zanetti; Jing Hua Zhao; Wei Zhao; Yonglan Zheng; Jie Zhou; Regina G Ziegler; Joseph M Zmuda; Jyotika K Fernandes; Gary S Gilkeson; Diane L Kamen; Kelly J Hunt; Ida J Spruill; Christine B Ambrosone; Stefan Ambs; Donna K Arnett; Larry Atwood; Diane M Becker; Sonja I Berndt; Leslie Bernstein; William J Blot; Ingrid B Borecki; Erwin P Bottinger; Donald W Bowden; Gregory Burke; Stephen J Chanock; Richard S Cooper; Jingzhong Ding; David Duggan; Michele K Evans; Caroline Fox; W Timothy Garvey; Jonathan P Bradfield; Hakon Hakonarson; Struan F A Grant; Ann Hsing; Lisa Chu; Jennifer J Hu; Dezheng Huo; Sue A Ingles; Esther M John; Joanne M Jordan; Edmond K Kabagambe; Sharon L R Kardia; Rick A Kittles; Phyllis J Goodman; Eric A Klein; Laurence N Kolonel; Loic Le Marchand; Simin Liu; Barbara McKnight; Robert C Millikan; Thomas H Mosley; Badri Padhukasahasram; L Keoki Williams; Sanjay R Patel; Ulrike Peters; Curtis A Pettaway; Patricia A Peyser; Bruce M Psaty; Susan Redline; Charles N Rotimi; Benjamin A Rybicki; Michèle M Sale; Pamela J Schreiner; Lisa B Signorello; Andrew B Singleton; Janet L Stanford; Sara S Strom; Michael J Thun; Mara Vitolins; Wei Zheng; Jason H Moore; Scott M Williams; Shamika Ketkar; Xiaofeng Zhu; Alan B Zonderman; Charles Kooperberg; George J Papanicolaou; Brian E Henderson; Alex P Reiner; Joel N Hirschhorn; Ruth J F Loos; Kari E North; Christopher A Haiman
Journal:  Nat Genet       Date:  2013-04-14       Impact factor: 38.330

10.  Functional consequences of a novel variant of PCSK1.

Authors:  Lindsay A Pickett; Michael Yourshaw; Valeria Albornoz; Zijun Chen; R Sergio Solorzano-Vargas; Stanley F Nelson; Martín G Martín; Iris Lindberg
Journal:  PLoS One       Date:  2013-01-28       Impact factor: 3.240

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  18 in total

1.  Cohort Profile: The Saguenay Youth Study (SYS).

Authors:  Zdenka Pausova; Tomas Paus; Michal Abrahamowicz; Manon Bernard; Daniel Gaudet; Gabriel Leonard; Michel Peron; G Bruce Pike; Louis Richer; Jean R Séguin; Suzanne Veillette
Journal:  Int J Epidemiol       Date:  2017-04-01       Impact factor: 7.196

2.  Testing for rare genetic causes of obesity: findings and experiences from a pediatric weight management program.

Authors:  Karyn J Roberts; Adolfo J Ariza; Kavitha Selvaraj; Maheen Quadri; Caren Mangarelli; Sarah Neault; Erica E Davis; Helen J Binns
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3.  The G209R mutant mouse as a model for human PCSK1 polyendocrinopathy.

Authors:  Manita Shakya; Surbhi Gahlot; Nicolle K Martin; Anoop Arunagiri; Martin G Martin; Peter Arvan; Malcolm J Low; Iris Lindberg
Journal:  Endocrinology       Date:  2022-03-04       Impact factor: 5.051

Review 4.  The importance of gene-environment interactions in human obesity.

Authors:  Hudson Reddon; Jean-Louis Guéant; David Meyre
Journal:  Clin Sci (Lond)       Date:  2016-09-01       Impact factor: 6.124

Review 5.  Genetic Determinants of Childhood Obesity.

Authors:  Sheridan H Littleton; Robert I Berkowitz; Struan F A Grant
Journal:  Mol Diagn Ther       Date:  2020-10-01       Impact factor: 4.074

Review 6.  PCSK1 Variants and Human Obesity.

Authors:  B Ramos-Molina; M G Martin; I Lindberg
Journal:  Prog Mol Biol Transl Sci       Date:  2016-01-29       Impact factor: 3.622

Review 7.  Obesity genetics and cardiometabolic health: Potential for risk prediction.

Authors:  Dharambir K Sanghera; Cynthia Bejar; Sonali Sharma; Rajeev Gupta; Piers R Blackett
Journal:  Diabetes Obes Metab       Date:  2019-03-20       Impact factor: 6.577

Review 8.  Benefits and limitations of genome-wide association studies.

Authors:  Vivian Tam; Nikunj Patel; Michelle Turcotte; Yohan Bossé; Guillaume Paré; David Meyre
Journal:  Nat Rev Genet       Date:  2019-08       Impact factor: 53.242

Review 9.  Mouse Models of Human Proprotein Convertase Insufficiency.

Authors:  Manita Shakya; Iris Lindberg
Journal:  Endocr Rev       Date:  2021-05-25       Impact factor: 19.871

10.  Single-Cell Transcriptome Profiling of Human Pancreatic Islets in Health and Type 2 Diabetes.

Authors:  Åsa Segerstolpe; Athanasia Palasantza; Pernilla Eliasson; Eva-Marie Andersson; Anne-Christine Andréasson; Xiaoyan Sun; Simone Picelli; Alan Sabirsh; Maryam Clausen; Magnus K Bjursell; David M Smith; Maria Kasper; Carina Ämmälä; Rickard Sandberg
Journal:  Cell Metab       Date:  2016-09-22       Impact factor: 27.287

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