Literature DB >> 25783877

Automated image analysis of FRET signals for subcellular cAMP quantification.

Silas J Leavesley1, Arie Nakhmani, Yi Gao, Thomas C Rich.   

Abstract

A variety of FRET probes have been developed to examine cAMP localization and dynamics in single cells. These probes offer a readily accessible approach to measure localized cAMP signals. However, given the low signal-to-noise ratio of most FRET probes and the dynamic nature of the intracellular environment, there have been marked limitations in the ability to use FRET probes to study localized signaling events within the same cell. Here, we outline a methodology to dissect kinetics of cAMP-mediated FRET signals in single cells using automated image analysis approaches. We additionally extend these approaches to the analysis of subcellular regions. These approaches offer an unique opportunity to assess localized cAMP kinetics in an unbiased, quantitative fashion.

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Year:  2015        PMID: 25783877     DOI: 10.1007/978-1-4939-2537-7_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  Applications and assessment of an excitation-scanning hyperspectral imaging system.

Authors:  Sam A Mayes; Kaysie Moore; Craig Browning; Phiwat Klomkaew; Thomas C Rich; Silas J Leavesley
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2018-02-20

2.  5D imaging approaches reveal the formation of distinct intracellular cAMP spatial gradients.

Authors:  Thomas C Rich; Naga Annamdevula; Kenny Trinh; Andrea L Britain; Samuel A Mayes; John R Griswold; Joshua Deal; Chase Hoffman; Savannah West; Silas J Leavesley
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02-17

3.  Overcoming limitations of FRET measurements.

Authors:  Silas J Leavesley; Thomas C Rich
Journal:  Cytometry A       Date:  2016-04       Impact factor: 4.355

4.  Optimization and applications of an excitation-scanning hyperspectral imaging system.

Authors:  Sam A Mayes; Phiwat Klomkaew; Silas J Leavesley; Thomas C Rich
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02-22

5.  Excitation-Scanning Hyperspectral Imaging System for Microscopic and Endoscopic Applications.

Authors:  Sam A Mayes; Silas J Leavesley; Thomas C Rich
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-04-06

6.  Hyperspectral imaging fluorescence excitation scanning for colon cancer detection.

Authors:  Silas J Leavesley; Mikayla Walters; Carmen Lopez; Thomas Baker; Peter F Favreau; Thomas C Rich; Paul F Rider; Carole W Boudreaux
Journal:  J Biomed Opt       Date:  2016-10-01       Impact factor: 3.170

7.  Comparing Methods for Analysis of Biomedical Hyperspectral Image Data.

Authors:  Silas J Leavesley; Brenner Sweat; Caitlyn Abbott; Peter F Favreau; Naga S Annamdevula; Thomas C Rich
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-02-16

8.  LED-based endoscopic light source for spectral imaging.

Authors:  Craig M Browning; Samuel Mayes; Peter Favreau; Thomas C Rich; Silas J Leavesley
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-07

9.  Three dimensional measurement of cAMP gradients using hyperspectral confocal microscopy.

Authors:  Thomas C Rich; Naga Annamdevula; Andrea L Britain; Samuel Mayes; Peter F Favreau; Silas J Leavelsey
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-09

10.  Comparison of spectral FRET microscopy approaches for single-cell analysis.

Authors:  Joshua Deal; Naga Annamdevula; Donald John Pleshinger; John Robert Griswold; Aliyah Odom; Alia Tayara; Malvika Lall; Craig Browning; Marina Parker; Thomas C Rich; Silas J Leavesley
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-02-17
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