Literature DB >> 25773178

Identification and characterization of a member of Rab subfamily, Rab8, from Clonorchis sinensis.

Pei Liang1, Lei He, Jinyun Yu, Zhizhi Xie, Xueqing Chen, Qiang Mao, Chi Liang, Yan Huang, Gang Lu, Xinbing Yu.   

Abstract

The Rabs act as a binary molecular switch that utilizes the conformational changes associated with the GTP/GDP cycle to elicit responses from target proteins. It regulates a broad spectrum of cellular processes including cell proliferation, cytoskeletal assembly, and intracellular membrane trafficking in eukaryotes. The Rab8 from Clonorchis sinensis (CsRab8) was composed of 199 amino acids. The deduced amino acid sequence shared above 50% identities with other species from trematode, tapeworm, mammal, insecta, nematode, and reptile, respectively. The homologous analysis of sequences showed the conservative domains: G1 box (GDSGVGKS), G2 box (T), G3 box (DTAG), G4 box (GNKCDL), and G5 box. In addition, the structure modeling had also shown other functional domains: GTP/Mg(2+) binding sites, switch I region, and switch II region. A phylogenic tree analysis indicated that the CsRab8 was clustered with the Rab from Schistosoma japonicum, and trematode and tapeworm came from the same branch, which was different from an evolutional branch built by other species, such as mammal animal, insecta, nematode, and reptile. The recombinant CsRab8 protein was expressed in Escherichia coli and the purified protein was a soluble molecule by 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis analysis. CsRab8 was identified as a component of excretory/secretory products of C. sinensis by western blot analysis. The transcriptional level of CsRab8 at metacercaria stage was the highest at the four stages and higher by 56.49-folds than that at adult worm, 1.23-folds than that at excysted metacercaria, and 2.69-folds than that at egg stage. Immunohistochemical localization analysis showed that CsRab8 was specifically distributed in the tegument, vitellarium, eggs, and testicle of adult worms, and detected on the vitellarium and tegument of metacercaria. Combined with the results, CsRab8 is indispensable for survival and development of parasites, especially for regulating excretory/secretory products secretion.

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Year:  2015        PMID: 25773178     DOI: 10.1007/s00436-015-4372-8

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  36 in total

1.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  An evolutionarily conserved domain in a subfamily of Rabs is crucial for the interaction with the guanyl nucleotide exchange factor Mss4.

Authors:  J L Burton; V Slepnev; P V De Camilli
Journal:  J Biol Chem       Date:  1997-02-07       Impact factor: 5.157

Review 3.  A review of the control of clonorchiasis sinensis and Taenia solium taeniasis/cysticercosis in China.

Authors:  Wei Wu; Xiaohua Qian; Yixin Huang; Qingbiao Hong
Journal:  Parasitol Res       Date:  2012-10-05       Impact factor: 2.289

Review 4.  Ypt/rab gtpases: regulators of protein trafficking.

Authors:  N Segev
Journal:  Sci STKE       Date:  2001-09-18

5.  Clonorchis sinensis enolase: identification and biochemical characterization of a glycolytic enzyme from excretory/secretory products.

Authors:  Xiaoyun Wang; Wenjun Chen; Fengyu Hu; Chuanhuan Deng; Chenhui Zhou; Xiaoli Lv; Yongxiu Fan; Jingtao Men; Yan Huang; Jiufeng Sun; Dong Hu; Jingfang Chen; Yabo Yang; Chi Liang; Huanqin Zheng; Xuchu Hu; Jin Xu; Zhongdao Wu; Xinbing Yu
Journal:  Mol Biochem Parasitol       Date:  2011-03-04       Impact factor: 1.759

6.  Mammalian suppressor of Sec4 modulates the inhibitory effect of Rab15 during early endocytosis.

Authors:  David J Strick; Dina M Francescutti; Yali Zhao; Lisa A Elferink
Journal:  J Biol Chem       Date:  2002-06-24       Impact factor: 5.157

7.  Bile-induced genes in Clonorchis sinensis metacercariae.

Authors:  Tae Im Kim; Pyo Yun Cho; Won Gi Yoo; Shunyu Li; Sung-Jong Hong
Journal:  Parasitol Res       Date:  2008-08-06       Impact factor: 2.289

Review 8.  A novel mammalian guanine nucleotide exchange factor (GEF) specific for rab proteins.

Authors:  J Burton; P De Camilli
Journal:  Adv Second Messenger Phosphoprotein Res       Date:  1994

Review 9.  Comparative genomics of the Rab protein family in Apicomplexan parasites.

Authors:  Gordon Langsley; Vera van Noort; Céline Carret; Markus Meissner; Etienne P de Villiers; Richard Bishop; Arnab Pain
Journal:  Microbes Infect       Date:  2008-02-08       Impact factor: 2.700

10.  Structural and functional analysis of the Entamoeba histolytica EhrabB gene promoter.

Authors:  Mónica Romero-Díaz; Consuelo Gómez; Israel López-Reyes; Máximo B Martínez; Esther Orozco; Mario A Rodríguez
Journal:  BMC Mol Biol       Date:  2007-09-20       Impact factor: 2.946

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