Literature DB >> 25769027

Correction: Discovering functional modules across diverse maize transcriptomes using COB, the co-expression browser.

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Abstract

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Year:  2015        PMID: 25769027      PMCID: PMC4359158          DOI: 10.1371/journal.pone.0120222

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


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Fig 4

GO enrichment analysis of co-expression clusters.

Gene clusters identified in Figure 2 were examined for enrichment of Gene Ontology terms. (A) Developmental cluster A, which exhibited a strong signal for expression in the anthers (see Figure 3), is enriched for GO terms related to sexual reproduction, response to desiccation, and cell wall biogenesis/modification. (B) Developmental cluster F, highlighted by patterns of expression in the leaves, is notably enriched for terms annotated for photosynthesis, response to temperature stimulus, and chlorophyll metabolism. (C) Genotype cluster M exhibits drastic under-expression in the P39 genotype, a sweet corn line, and shows significant GO enrichment in terms related to UDP-glucose as well as nucleotide-sugar metabolism and lipid transport

GO enrichment analysis of co-expression clusters.

Gene clusters identified in Figure 2 were examined for enrichment of Gene Ontology terms. (A) Developmental cluster A, which exhibited a strong signal for expression in the anthers (see Figure 3), is enriched for GO terms related to sexual reproduction, response to desiccation, and cell wall biogenesis/modification. (B) Developmental cluster F, highlighted by patterns of expression in the leaves, is notably enriched for terms annotated for photosynthesis, response to temperature stimulus, and chlorophyll metabolism. (C) Genotype cluster M exhibits drastic under-expression in the P39 genotype, a sweet corn line, and shows significant GO enrichment in terms related to UDP-glucose as well as nucleotide-sugar metabolism and lipid transport
  1 in total

1.  Discovering functional modules across diverse maize transcriptomes using COB, the Co-expression Browser.

Authors:  Robert J Schaefer; Roman Briskine; Nathan M Springer; Chad L Myers
Journal:  PLoS One       Date:  2014-06-12       Impact factor: 3.240

  1 in total

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