Literature DB >> 25763705

Diurnal and circadian expression profiles of glycerolipid biosynthetic genes in Arabidopsis.

Yuki Nakamura1, Fernando Andrés, Kazue Kanehara, Yu-chi Liu, George Coupland, Peter Dörmann.   

Abstract

Glycerolipid composition in plant membranes oscillates in response to diurnal change. However, its functional significance remained unclear. A recent discovery that Arabidopsis florigen FT binds diurnally oscillating phosphatidylcholine molecules to promote flowering suggests that diurnal oscillation of glycerolipid composition is an important input in flowering time control. Taking advantage of public microarray data, we globally analyzed the expression pattern of glycerolipid biosynthetic genes in Arabidopsis under long-day, short-day, and continuous light conditions. The results revealed that 12 genes associated with glycerolipid metabolism showed significant oscillatory profiles. Interestingly, expression of most of these genes followed circadian profiles, suggesting that glycerolipid biosynthesis is partially under clock regulation. The oscillating expression profile of one representative gene, PECT1, was analyzed in detail. Expression of PECT1 showed a circadian pattern highly correlated with that of the clock-regulated gene GIGANTEA. Thus, our study suggests that a considerable number of glycerolipid biosynthetic genes are under circadian control.

Entities:  

Keywords:  Arabidopsis thaliana; Diurnal/circadian oscillation; gene expression; glycerolipid

Mesh:

Substances:

Year:  2014        PMID: 25763705      PMCID: PMC4205134          DOI: 10.4161/psb.29715

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  21 in total

1.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

2.  Global transcript levels respond to small changes of the carbon status during progressive exhaustion of carbohydrates in Arabidopsis rosettes.

Authors:  Björn Usadel; Oliver E Bläsing; Yves Gibon; Kristin Retzlaff; Melanie Höhne; Manuela Günther; Mark Stitt
Journal:  Plant Physiol       Date:  2008-02-27       Impact factor: 8.340

3.  Photoperiodic control of carbon distribution during the floral transition in Arabidopsis.

Authors:  M Isabel Ortiz-Marchena; Tomás Albi; Eva Lucas-Reina; Fatima E Said; Francisco J Romero-Campero; Beatriz Cano; M Teresa Ruiz; José M Romero; Federico Valverde
Journal:  Plant Cell       Date:  2014-02-21       Impact factor: 11.277

4.  Defects in CTP:PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE affect embryonic and postembryonic development in Arabidopsis.

Authors:  Junya Mizoi; Masanobu Nakamura; Ikuo Nishida
Journal:  Plant Cell       Date:  2006-12-22       Impact factor: 11.277

5.  Arabidopsis synchronizes jasmonate-mediated defense with insect circadian behavior.

Authors:  Danielle Goodspeed; E Wassim Chehab; Amelia Min-Venditti; Janet Braam; Michael F Covington
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-13       Impact factor: 11.205

6.  TIME FOR COFFEE represses accumulation of the MYC2 transcription factor to provide time-of-day regulation of jasmonate signaling in Arabidopsis.

Authors:  Jieun Shin; Katharina Heidrich; Alfredo Sanchez-Villarreal; Jane E Parker; Seth J Davis
Journal:  Plant Cell       Date:  2012-06-12       Impact factor: 11.277

7.  Light and cytokinin play a co-operative role in MGDG synthesis in greening cucumber cotyledons.

Authors:  Yoshiki Yamaryo; Daisuke Kanai; Koichiro Awai; Mie Shimojima; Tatsuru Masuda; Hiroshi Shimada; Ken-ichiro Takamiya; Hiroyuki Ohta
Journal:  Plant Cell Physiol       Date:  2003-08       Impact factor: 4.927

8.  Elevated atmospheric CO(2) concentration and diurnal cycle induce changes in lipid composition in Arabidopsis thaliana.

Authors:  Åsa Ekman; Leif Bülow; Sten Stymne
Journal:  New Phytol       Date:  2007       Impact factor: 10.151

9.  Levels of Arabidopsis thaliana Leaf Phosphatidic Acids, Phosphatidylserines, and Most Trienoate-Containing Polar Lipid Molecular Species Increase during the Dark Period of the Diurnal Cycle.

Authors:  Sara Maatta; Brad Scheu; Mary R Roth; Pamela Tamura; Maoyin Li; Todd D Williams; Xuemin Wang; Ruth Welti
Journal:  Front Plant Sci       Date:  2012-03-14       Impact factor: 5.753

10.  Arabidopsis florigen FT binds to diurnally oscillating phospholipids that accelerate flowering.

Authors:  Yuki Nakamura; Fernando Andrés; Kazue Kanehara; Yu-chi Liu; Peter Dörmann; George Coupland
Journal:  Nat Commun       Date:  2014-04-04       Impact factor: 14.919

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  5 in total

Review 1.  Environment-mediated mutagenetic interference on genetic stabilization and circadian rhythm in plants.

Authors:  Pradeep Kumar; Diksha Pathania; Sourbh Thakur; Mamta Sharma
Journal:  Cell Mol Life Sci       Date:  2022-06-10       Impact factor: 9.261

2.  Non-Catalytic Subunits Facilitate Quaternary Organization of Plastidic Acetyl-CoA Carboxylase.

Authors:  Kiran-Kumar Shivaiah; Geng Ding; Bryon Upton; Basil J Nikolau
Journal:  Plant Physiol       Date:  2019-12-02       Impact factor: 8.340

3.  Diurnal dynamics of the Arabidopsis rosette proteome and phosphoproteome.

Authors:  R Glen Uhrig; Sira Echevarría-Zomeño; Pascal Schlapfer; Jonas Grossmann; Bernd Roschitzki; Niklas Koerber; Fabio Fiorani; Wilhelm Gruissem
Journal:  Plant Cell Environ       Date:  2020-12-24       Impact factor: 7.228

Review 4.  Florigen and its homologs of FT/CETS/PEBP/RKIP/YbhB family may be the enzymes of small molecule metabolism: review of the evidence.

Authors:  Olga Tsoy; Arcady Mushegian
Journal:  BMC Plant Biol       Date:  2022-01-27       Impact factor: 4.215

5.  Metabolic Profiling of Intact Arabidopsis thaliana Leaves during Circadian Cycle Using 1H High Resolution Magic Angle Spinning NMR.

Authors:  D Augustijn; U Roy; R van Schadewijk; H J M de Groot; A Alia
Journal:  PLoS One       Date:  2016-09-23       Impact factor: 3.240

  5 in total

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