Literature DB >> 25763623

Plant secretomics: identification, isolation, and biological significance under environmental stress.

Tehreem Tanveer1, Kanwal Shaheen, Sajida Parveen, Alvina Gul Kazi, Parvaiz Ahmad.   

Abstract

Plant secretomes are the proteins secreted by the plant cells and are involved in the maintenance of cell wall structure, relationship between host and pathogen, communication between different cells in the plant, etc. Amalgamation of methodologies like bioinformatics, biochemical, and proteomics are used to separate, classify, and outline secretomes by means of harmonizing in planta systems and in vitro suspension cultured cell system (SSCs). We summed up and explained the meaning of secretome, methods used for the identification and isolation of secreted proteins from extracellular space and methods for the assessment of purity of secretome proteins in this review. Two D PAGE method and HPLC based methods for the analysis together with different bioinformatics tools used for the prediction of secretome proteins are also discussed. Biological significance of secretome proteins under different environmental stresses, i.e., salt stress, drought stress, oxidative stress, etc., defense responses and plant interactions with environment are also explained in detail.

Entities:  

Keywords:  Proteomics; secretome; secretory pathways; signal peptide

Mesh:

Substances:

Year:  2014        PMID: 25763623      PMCID: PMC4203502          DOI: 10.4161/psb.29426

Source DB:  PubMed          Journal:  Plant Signal Behav        ISSN: 1559-2316


  81 in total

Review 1.  Unconventional protein secretion.

Authors:  Yu Ding; Juan Wang; Junqi Wang; York-Dieter Stierhof; David G Robinson; Liwen Jiang
Journal:  Trends Plant Sci       Date:  2012-07-09       Impact factor: 18.313

Review 2.  Approaches to the study of the cell secretome.

Authors:  Yetrib Hathout
Journal:  Expert Rev Proteomics       Date:  2007-04       Impact factor: 3.940

3.  Changes of defense proteins in the extracellular proteome of grapevine (Vitis vinifera cv. Gamay) cell cultures in response to elicitors.

Authors:  M J Martinez-Esteso; S Sellés-Marchart; J C Vera-Urbina; M A Pedreño; R Bru-Martinez
Journal:  J Proteomics       Date:  2009-10-12       Impact factor: 4.044

4.  Comparative secretome investigation of Magnaporthe oryzae proteins responsive to nitrogen starvation.

Authors:  Yiming Wang; Jingni Wu; Zee Yong Park; Sang Gon Kim; Randeep Rakwal; Ganesh Kumar Agrawal; Sun Tae Kim; Kyu Young Kang
Journal:  J Proteome Res       Date:  2011-06-02       Impact factor: 4.466

5.  Use of intercellular washing fluid to investigate the secreted proteome of the rice-Magnaporthe interaction.

Authors:  Matthew R Shenton; Thomas Berberich; Masaharu Kamo; Tetsuro Yamashita; Hideharu Taira; Ryohei Terauchi
Journal:  J Plant Res       Date:  2012-01-14       Impact factor: 2.629

6.  Dehydration-responsive reversible and irreversible changes in the extracellular matrix: comparative proteomics of chickpea genotypes with contrasting tolerance.

Authors:  Deepti Bhushan; Dinesh Kumar Jaiswal; Doel Ray; Debarati Basu; Asis Datta; Subhra Chakraborty; Niranjan Chakraborty
Journal:  J Proteome Res       Date:  2011-03-16       Impact factor: 4.466

7.  Analysis of the xylem sap proteome of Brassica oleracea reveals a high content in secreted proteins.

Authors:  Laetitia Ligat; Emmanuelle Lauber; Cécile Albenne; Hélène San Clemente; Benoît Valot; Michel Zivy; Rafael Pont-Lezica; Matthieu Arlat; Elisabeth Jamet
Journal:  Proteomics       Date:  2011-03-17       Impact factor: 3.984

8.  Root-microbe communication through protein secretion.

Authors:  Clelia De-la-Peña; Zhentian Lei; Bonnie S Watson; Lloyd W Sumner; Jorge M Vivanco
Journal:  J Biol Chem       Date:  2008-07-17       Impact factor: 5.157

9.  FunSecKB: the Fungal Secretome KnowledgeBase.

Authors:  Gengkon Lum; Xiang Jia Min
Journal:  Database (Oxford)       Date:  2011-02-06       Impact factor: 3.451

10.  Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana.

Authors:  Saskia Floerl; Andrzej Majcherczyk; Mareike Possienke; Kirstin Feussner; Hella Tappe; Christiane Gatz; Ivo Feussner; Ursula Kües; Andrea Polle
Journal:  PLoS One       Date:  2012-02-20       Impact factor: 3.240

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  9 in total

1.  The Under-explored Extracellular Proteome of Aero-Terrestrial Microalgae Provides Clues on Different Mechanisms of Desiccation Tolerance in Non-Model Organisms.

Authors:  María González-Hourcade; Eva M Del Campo; Leonardo M Casano
Journal:  Microb Ecol       Date:  2020-09-28       Impact factor: 4.552

2.  AhDGR2, an amaranth abiotic stress-induced DUF642 protein gene, modifies cell wall structure and composition and causes salt and ABA hyper-sensibility in transgenic Arabidopsis.

Authors:  Paola A Palmeros-Suárez; Julio A Massange-Sánchez; Lino Sánchez-Segura; Norma A Martínez-Gallardo; Eduardo Espitia Rangel; Juan F Gómez-Leyva; John P Délano-Frier
Journal:  Planta       Date:  2016-12-17       Impact factor: 4.116

3.  Comparative secretome analysis between salinity-tolerant and control Chlamydomonas reinhardtii strains.

Authors:  Parthompong Ves-Urai; Sucheewin Krobthong; Karnpitcha Thongsuk; Sittiruk Roytrakul; Chotika Yokthongwattana
Journal:  Planta       Date:  2021-02-16       Impact factor: 4.116

Review 4.  Understanding the plant-pathogen interactions in the context of proteomics-generated apoplastic proteins inventory.

Authors:  Ravi Gupta; So Eui Lee; Ganesh K Agrawal; Randeep Rakwal; Sangryeol Park; Yiming Wang; Sun T Kim
Journal:  Front Plant Sci       Date:  2015-06-02       Impact factor: 5.753

5.  The Apoplastic Secretome of Trichoderma virens During Interaction With Maize Roots Shows an Inhibition of Plant Defence and Scavenging Oxidative Stress Secreted Proteins.

Authors:  Guillermo Nogueira-Lopez; David R Greenwood; Martin Middleditch; Christopher Winefield; Carla Eaton; Johanna M Steyaert; Artemio Mendoza-Mendoza
Journal:  Front Plant Sci       Date:  2018-04-05       Impact factor: 5.753

Review 6.  The Multiple Facets of Plant-Fungal Interactions Revealed Through Plant and Fungal Secretomics.

Authors:  Delphine Vincent; Maryam Rafiqi; Dominique Job
Journal:  Front Plant Sci       Date:  2020-01-08       Impact factor: 5.753

7.  Nectar- and stigma exudate-specific expression of an acidic chitinase could partially protect certain apple cultivars against fire blight disease.

Authors:  Anita Kurilla; Timea Toth; Laszlo Dorgai; Zsuzsanna Darula; Tamas Lakatos; Daniel Silhavy; Zoltan Kerenyi; Geza Dallmann
Journal:  Planta       Date:  2019-11-28       Impact factor: 4.116

8.  Secretome Analysis of Arabidopsis-Trichoderma atroviride Interaction Unveils New Roles for the Plant Glutamate:Glyoxylate Aminotransferase GGAT1 in Plant Growth Induced by the Fungus and Resistance against Botrytis cinerea.

Authors:  María Del Carmen González-López; Saúl Jijón-Moreno; Mitzuko Dautt-Castro; Cesaré Ovando-Vázquez; Tamar Ziv; Benjamin A Horwitz; Sergio Casas-Flores
Journal:  Int J Mol Sci       Date:  2021-06-24       Impact factor: 5.923

9.  G-protein Signaling Components GCR1 and GPA1 Mediate Responses to Multiple Abiotic Stresses in Arabidopsis.

Authors:  Navjyoti Chakraborty; Navneet Singh; Kanwaljeet Kaur; Nandula Raghuram
Journal:  Front Plant Sci       Date:  2015-11-18       Impact factor: 5.753

  9 in total

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