Literature DB >> 25758045

The complete mitochondrial genome sequence of the Xizang Plateau frog, Nanorana parkeri (Anura: Dicroglossidae).

Lichun Jiang1, Qiping Ruan1, Wei Chen2.   

Abstract

The Xizang Plateau frog (Nanorana parkeri) belongs to the family Dicroglossidae, which distributes in southern and eastern Xizang, southern-most Qinghai in China, high elevations of north-central Nepal, Himalayan Bhutan, northeastern Kashmir and India. In this study, the complete mitochondrial genome of N. parkeri was sequenced. The mitogenome was 17,837 bp in length, consisting of 13 protein-coding genes, 22 transfer RNA (tRNA) genes, two ribosomal RNA genes, and a non-coding control region (CR). As in other vertebrates, most mitochondrial genes are encoded on the heavy strand, except for ND6 and eight tRNA genes, which are encoded on the light strand. The overall base composition of the N. parkeri is A: 27.7 % A, T: 30.1 % T, C: 26.6% and G: 15.6%. The alignment of the Nanorana species CRs exhibited high genetic variability and rich A + T content. In comparison with the mtDNA sequences typical of vertebrates, a tandem duplication of the tRNA(Met) gene and a rearrangement of the tRNA(Thr), tRNA(Pro) and tRNA(Leu) (CUN) genes were found. The complete mitogenome of N. parkeri can provided an important data for the studies on phylogenetic relationship and population genetics to further explore the taxonomic status of this species.

Entities:  

Keywords:  Complete mitochondrial genome; Dicroglossidae; Nanorana parkeri; protein-coding genes

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Year:  2015        PMID: 25758045     DOI: 10.3109/19401736.2015.1007327

Source DB:  PubMed          Journal:  Mitochondrial DNA A DNA Mapp Seq Anal        ISSN: 2470-1394            Impact factor:   1.514


  3 in total

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Journal:  G3 (Bethesda)       Date:  2022-02-04       Impact factor: 3.542

2.  The complete mitochondrial genome sequences of Nanorana chayuensis.

Authors:  Min Tang; Jiahong Liao; Liqing Peng; Lichun Jiang; Zhangqiang You; Wei Chen
Journal:  Mitochondrial DNA B Resour       Date:  2020-01-22       Impact factor: 0.658

3.  The complete mitochondrial genome sequence of Himalayan toad Duttaphrynus himalayanus (Anura: Bufonidae).

Authors:  Jiahong Liao; Min Tang; Liqing Peng; Lichun Jiang; Zhangqiang You; Wei Chen
Journal:  Mitochondrial DNA B Resour       Date:  2020-01-20       Impact factor: 0.658

  3 in total

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