Literature DB >> 25754994

Expression data analysis with Reactome.

Steve Jupe1, Antonio Fabregat1, Henning Hermjakob1.   

Abstract

The Reactome database of curated biological pathways provides a tool for visualizing user-supplied expression data as an overlay on pathway diagrams, thereby affording an effective means to examine expression of the constituents of the pathway and determine whether all that are necessary are present. Several experiments can be visualized in succession, to determine whether expression changes with experimental conditions, a useful feature for examining a time-course, dose-response, or disease progression.
Copyright © 2015 John Wiley & Sons, Inc.

Entities:  

Keywords:  expression analysis; microarray; pathway; quantitative proteomics; reactome

Mesh:

Year:  2015        PMID: 25754994      PMCID: PMC4407007          DOI: 10.1002/0471250953.bi0820s49

Source DB:  PubMed          Journal:  Curr Protoc Bioinformatics        ISSN: 1934-3396


  6 in total

1.  Merkel Cell Polyomavirus Downregulates N-myc Downstream-Regulated Gene 1, Leading to Cellular Proliferation and Migration.

Authors:  Purnima Gupta; Naveed Shahzad; Alexis Harold; Masahiro Shuda; Assunta Venuti; Maria Carmen Romero-Medina; Laura Pacini; Lise Brault; Alexis Robitaille; Valerio Taverniti; Hector Hernandez-Vargas; Geoffroy Durand; Florence Le Calvez-Kelm; Tarik Gheit; Rosita Accardi; Massimo Tommasino
Journal:  J Virol       Date:  2020-01-17       Impact factor: 5.103

2.  Identification of a Common Different Gene Expression Signature in Ischemic Cardiomyopathy.

Authors:  Yana Li; Qiu Jiang; Zhiwen Ding; Guijian Liu; Peng Yu; Guoliang Jiang; Ziqing Yu; Chunjie Yang; Juying Qian; Hong Jiang; Yunzeng Zou
Journal:  Genes (Basel)       Date:  2018-01-22       Impact factor: 4.096

3.  Label-Free Quantitative Proteomics in a Methylmalonyl-CoA Mutase-Silenced Neuroblastoma Cell Line.

Authors:  Michele Costanzo; Armando Cevenini; Emanuela Marchese; Esther Imperlini; Maddalena Raia; Luigi Del Vecchio; Marianna Caterino; Margherita Ruoppolo
Journal:  Int J Mol Sci       Date:  2018-11-13       Impact factor: 5.923

4.  Urinary Proteomic Signature in Acute Decompensated Heart Failure: Advances into Molecular Pathophysiology.

Authors:  Elisa Diaz-Riera; Maísa García-Arguinzonis; Laura López; Xavier Garcia-Moll; Lina Badimon; Teresa Padro
Journal:  Int J Mol Sci       Date:  2022-02-20       Impact factor: 5.923

5.  Integrative analyses of biomarkers and pathways for heart failure.

Authors:  Shaowei Fan; Yuanhui Hu
Journal:  BMC Med Genomics       Date:  2022-03-27       Impact factor: 3.063

Review 6.  Application of Functional Genomics for Bovine Respiratory Disease Diagnostics.

Authors:  Aswathy N Rai; William B Epperson; Bindu Nanduri
Journal:  Bioinform Biol Insights       Date:  2015-10-22
  6 in total

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