Literature DB >> 25747592

Contemporary NMR Studies of Protein Electrostatics.

Mathias A S Hass1, Frans A A Mulder.   

Abstract

Electrostatics play an important role in many aspects of protein chemistry. However, the accurate determination of side chain proton affinity in proteins by experiment and theory remains challenging. In recent years the field of nuclear magnetic resonance spectroscopy has advanced the way that protonation states are measured, allowing researchers to examine electrostatic interactions at an unprecedented level of detail and accuracy. Experiments are now in place that follow pH-dependent (13)C and (15)N chemical shifts as spatially close as possible to the sites of protonation, allowing all titratable amino acid side chains to be probed sequence specifically. The strong and telling response of carefully selected reporter nuclei allows individual titration events to be monitored. At the same time, improved frameworks allow researchers to model multiple coupled protonation equilibria and to identify the underlying pH-dependent contributions to the chemical shifts.

Keywords:  chemical shift titration; nuclear magnetic resonance (NMR) spectroscopy; pKa; protein electrostatics; protonation

Mesh:

Substances:

Year:  2015        PMID: 25747592     DOI: 10.1146/annurev-biophys-083012-130351

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  19 in total

1.  Side chain electrostatic interactions and pH-dependent expansion of the intrinsically disordered, highly acidic carboxyl-terminus of γ-tubulin.

Authors:  Brandon J Payliss; Jackie Vogel; Anthony K Mittermaier
Journal:  Protein Sci       Date:  2019-04-24       Impact factor: 6.725

2.  Active-Site pKa Determination for Photoactive Yellow Protein Rationalizes Slow Ground-State Recovery.

Authors:  Nur Alia Oktaviani; Trijntje J Pool; Yuichi Yoshimura; Hironari Kamikubo; Ruud M Scheek; Mikio Kataoka; Frans A A Mulder
Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

3.  pH Dependence of Charge Multipole Moments in Proteins.

Authors:  Anže Lošdorfer Božič; Rudolf Podgornik
Journal:  Biophys J       Date:  2017-10-03       Impact factor: 4.033

4.  Exploring the autoinhibitory domain of the electrogenic Na+ /HCO3- transporter NBCe1-B, from residues 28 to 62.

Authors:  Seong-Ki Lee; Walter F Boron
Journal:  J Physiol       Date:  2018-07-05       Impact factor: 5.182

Review 5.  NMR Methods for Characterizing the Basic Side Chains of Proteins: Electrostatic Interactions, Hydrogen Bonds, and Conformational Dynamics.

Authors:  Dan Nguyen; Chuanying Chen; B Montgomery Pettitt; Junji Iwahara
Journal:  Methods Enzymol       Date:  2018-09-27       Impact factor: 1.600

6.  Intrinsically disordered inhibitor of glutamine synthetase is a functional protein with random-coil-like pKa values.

Authors:  Concetta Cozza; José L Neira; Francisco J Florencio; M Isabel Muro-Pastor; Bruno Rizzuti
Journal:  Protein Sci       Date:  2017-03-27       Impact factor: 6.725

7.  Modeling pH-Dependent NMR Chemical Shift Perturbations in Peptides.

Authors:  Efrosini Artikis; Charles L Brooks
Journal:  Biophys J       Date:  2019-06-12       Impact factor: 4.033

8.  Model for screened, charge-regulated electrostatics of an eye lens protein: Bovine gammaB-crystallin.

Authors:  Christopher W Wahle; K Michael Martini; Dawn M Hollenbeck; Andreas Langner; David S Ross; John F Hamilton; George M Thurston
Journal:  Phys Rev E       Date:  2017-09-25       Impact factor: 2.529

9.  NMR spectroscopy charges into protein surface electrostatics.

Authors:  Frans A A Mulder
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-27       Impact factor: 11.205

Review 10.  Experimental approaches for investigating ion atmospheres around nucleic acids and proteins.

Authors:  Binhan Yu; Junji Iwahara
Journal:  Comput Struct Biotechnol J       Date:  2021-04-17       Impact factor: 7.271

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.