Literature DB >> 25743546

The multihued palette of dye-decolorizing peroxidases.

Rahul Singh1, Lindsay D Eltis2.   

Abstract

Dye-decolorizing peroxidases (DyPs; EC 1.11.1.19) are heme enzymes that comprise a family of the dimeric α+β barrel structural superfamily of proteins. The first DyP, identified relatively recently in the fungus Bjerkandera adusta, was characterized for its ability to catalyze the decolorization of anthraquinone-based industrial dyes. These enzymes are now known to be present in all three domains of life, but do not appear to occur in plants or animals. They are involved in a range of physiological processes, although in many cases their roles remain unknown. This has not prevented the development of their biocatalytic potential, which includes the transformation of lignin. This review highlights the functional diversity of DyPs in the light of phylogenetic, structural and biochemical data. The phylogenetic analysis reveals the existence of at least five classes of DyPs. Their potential physiological roles are discussed based in part on synteny analyses. Finally, the considerable biotechnological potential of DyPs is summarized. Crown
Copyright © 2015. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Biotechnology; Compound I; Enzymology; Heme-proteins; Lignin; Structure–function

Mesh:

Substances:

Year:  2015        PMID: 25743546     DOI: 10.1016/j.abb.2015.01.014

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  21 in total

1.  Identification of Surface-Exposed Protein Radicals and A Substrate Oxidation Site in A-Class Dye-Decolorizing Peroxidase from Thermomonospora curvata.

Authors:  Ruben Shrestha; Xuejie Chen; Kasra X Ramyar; Zahra Hayati; Eric A Carlson; Stefan H Bossmann; Likai Song; Brian V Geisbrecht; Ping Li
Journal:  ACS Catal       Date:  2016-10-12       Impact factor: 13.084

2.  Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects.

Authors:  Ruben Shrestha; Gaochao Huang; David A Meekins; Brian V Geisbrecht; Ping Li
Journal:  ACS Catal       Date:  2017-08-09       Impact factor: 13.084

3.  Revealing two important tryptophan residues with completely different roles in a dye-decolorizing peroxidase from Irpex lacteus F17.

Authors:  Liuqing Li; Tao Wang; Taohua Chen; Wenhan Huang; Yinliang Zhang; Rong Jia; Chao He
Journal:  Biotechnol Biofuels       Date:  2021-05-31       Impact factor: 6.040

4.  On the Track of Long-Range Electron Transfer in B-Type Dye-Decolorizing Peroxidases: Identification of a Tyrosyl Radical by Computational Prediction and Electron Paramagnetic Resonance Spectroscopy.

Authors:  Kevin Nys; Paul Georg Furtmüller; Christian Obinger; Sabine Van Doorslaer; Vera Pfanzagl
Journal:  Biochemistry       Date:  2021-03-30       Impact factor: 3.321

Review 5.  Nanotechnological Applications Based on Bacterial Encapsulins.

Authors:  Javier M Rodríguez; Carolina Allende-Ballestero; Jeroen J L M Cornelissen; José R Castón
Journal:  Nanomaterials (Basel)       Date:  2021-06-01       Impact factor: 5.076

6.  Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum.

Authors:  Amrita Rai; Johann P Klare; Patrick Y A Reinke; Felix Englmaier; Jörg Fohrer; Roman Fedorov; Manuel H Taft; Igor Chizhov; Ute Curth; Oliver Plettenburg; Dietmar J Manstein
Journal:  Int J Mol Sci       Date:  2021-06-10       Impact factor: 5.923

7.  The DyP-type peroxidase DtpA is a Tat-substrate required for GlxA maturation and morphogenesis in Streptomyces.

Authors:  Marloes L C Petrus; Erik Vijgenboom; Amanda K Chaplin; Jonathan A R Worrall; Gilles P van Wezel; Dennis Claessen
Journal:  Open Biol       Date:  2016-01       Impact factor: 6.411

8.  Chemistry and Molecular Dynamics Simulations of Heme b-HemQ and Coproheme-HemQ.

Authors:  Stefan Hofbauer; Marco Dalla Sega; Stefan Scheiblbrandner; Zuzana Jandova; Irene Schaffner; Georg Mlynek; Kristina Djinović-Carugo; Gianantonio Battistuzzi; Paul G Furtmüller; Chris Oostenbrink; Christian Obinger
Journal:  Biochemistry       Date:  2016-09-15       Impact factor: 3.162

9.  Reducing biomass recalcitrance by heterologous expression of a bacterial peroxidase in tobacco (Nicotiana benthamiana).

Authors:  Ayalew Ligaba-Osena; Bertrand Hankoua; Kay DiMarco; Robert Pace; Mark Crocker; Jesse McAtee; Nivedita Nagachar; Ming Tien; Tom L Richard
Journal:  Sci Rep       Date:  2017-12-06       Impact factor: 4.379

Review 10.  Linking Enzymatic Oxidative Degradation of Lignin to Organics Detoxification.

Authors:  Xiaolu Wang; Bin Yao; Xiaoyun Su
Journal:  Int J Mol Sci       Date:  2018-10-28       Impact factor: 5.923

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