Literature DB >> 25740769

Isolation and characterization of porcine deltacoronavirus from pigs with diarrhea in the United States.

Hui Hu1, Kwonil Jung2, Anastasia N Vlasova2, Juliet Chepngeno2, Zhongyan Lu2, Qiuhong Wang2, Linda J Saif3.   

Abstract

Porcine deltacoronavirus (PDCoV) is a novel coronavirus that causes diarrhea in nursing piglets. Following its first detection in the United States in February 2014, additional PDCoV strains have been identified in the United States and Canada. Currently, no treatments or vaccines for PDCoV are available. In this study, U.S. PDCoV strain OH-FD22 from intestinal contents of a diarrheic pig from Ohio was isolated in swine testicular (ST) and LLC porcine kidney (LLC-PK) cell cultures by using various medium additives. We also isolated PDCoV [OH-FD22(DC44) strain] in LLC-PK cells from intestinal contents of PDCoV OH-FD22 strain-inoculated gnotobiotic (Gn) pigs. Cell culture isolation and propagation were optimized, and the isolates were serially propagated in cell culture for >20 passages. The full-length S and N genes were sequenced to study PDCoV genetic changes after passage in Gn pigs and cell culture (passage 11 [P11] and P20). Genetically, the S and N genes of the PDCoV isolates were relatively stable during the first 20 passages in cell culture, with only 5 nucleotide changes, each corresponding to an amino acid change. The S and N genes of our sequenced strains were genetically closely related to each other and to other U.S. PDCoV strains, with the highest sequence similarity to South Korean strain KNU14-04. This is the first report describing cell culture isolation, serial propagation, and biological and genetic characterization of cell-adapted PDCoV strains. The information presented in this study is important for the development of diagnostic reagents, assays, and potential vaccines against emergent PDCoV strains.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 25740769      PMCID: PMC4400786          DOI: 10.1128/JCM.00031-15

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  30 in total

Review 1.  Porcine enteric caliciviruses: genetic and antigenic relatedness to human caliciviruses, diagnosis and epidemiology.

Authors:  Qiu-Hong Wang; Veronica Costantini; Linda J Saif
Journal:  Vaccine       Date:  2006-12-29       Impact factor: 3.641

2.  Role of proteases in the release of porcine epidemic diarrhea virus from infected cells.

Authors:  Kazuya Shirato; Shutoku Matsuyama; Makoto Ujike; Fumihiro Taguchi
Journal:  J Virol       Date:  2011-05-25       Impact factor: 5.103

3.  Serial propagation of porcine enteric calicivirus-like virus in primary porcine kidney cell cultures.

Authors:  W T Flynn; L J Saif
Journal:  J Clin Microbiol       Date:  1988-02       Impact factor: 5.948

4.  Isolation and characterization of a novel Betacoronavirus subgroup A coronavirus, rabbit coronavirus HKU14, from domestic rabbits.

Authors:  Susanna K P Lau; Patrick C Y Woo; Cyril C Y Yip; Rachel Y Y Fan; Yi Huang; Ming Wang; Rongtong Guo; Carol S F Lam; Alan K L Tsang; Kenneth K Y Lai; Kwok-Hung Chan; Xiao-Yan Che; Bo-Jian Zheng; Kwok-Yung Yuen
Journal:  J Virol       Date:  2012-03-07       Impact factor: 5.103

5.  Identification of diverse alphacoronaviruses and genomic characterization of a novel severe acute respiratory syndrome-like coronavirus from bats in China.

Authors:  Biao He; Yuzhen Zhang; Lin Xu; Weihong Yang; Fanli Yang; Yun Feng; Lele Xia; Jihua Zhou; Weibin Zhen; Ye Feng; Huancheng Guo; Hailin Zhang; Changchun Tu
Journal:  J Virol       Date:  2014-04-09       Impact factor: 5.103

6.  Propagation of the virus of porcine epidemic diarrhea in cell culture.

Authors:  M Hofmann; R Wyler
Journal:  J Clin Microbiol       Date:  1988-11       Impact factor: 5.948

7.  Genetic characterization of Betacoronavirus lineage C viruses in bats reveals marked sequence divergence in the spike protein of pipistrellus bat coronavirus HKU5 in Japanese pipistrelle: implications for the origin of the novel Middle East respiratory syndrome coronavirus.

Authors:  Susanna K P Lau; Kenneth S M Li; Alan K L Tsang; Carol S F Lam; Shakeel Ahmed; Honglin Chen; Kwok-Hung Chan; Patrick C Y Woo; Kwok-Yung Yuen
Journal:  J Virol       Date:  2013-05-29       Impact factor: 5.103

8.  Complete Genome Characterization of Korean Porcine Deltacoronavirus Strain KOR/KNU14-04/2014.

Authors:  Sunhee Lee; Changhee Lee
Journal:  Genome Announc       Date:  2014-11-26

9.  Detection and genetic characterization of deltacoronavirus in pigs, Ohio, USA, 2014.

Authors:  Leyi Wang; Beverly Byrum; Yan Zhang
Journal:  Emerg Infect Dis       Date:  2014-07       Impact factor: 6.883

10.  Cell culture isolation and sequence analysis of genetically diverse US porcine epidemic diarrhea virus strains including a novel strain with a large deletion in the spike gene.

Authors:  Tomoichiro Oka; Linda J Saif; Douglas Marthaler; Malak A Esseili; Tea Meulia; Chun-Ming Lin; Anastasia N Vlasova; Kwonil Jung; Yan Zhang; Qiuhong Wang
Journal:  Vet Microbiol       Date:  2014-08-27       Impact factor: 3.293

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  99 in total

1.  Glycan Shield and Fusion Activation of a Deltacoronavirus Spike Glycoprotein Fine-Tuned for Enteric Infections.

Authors:  Xiaoli Xiong; M Alejandra Tortorici; Joost Snijder; Craig Yoshioka; Alexandra C Walls; Wentao Li; Andrew T McGuire; Félix A Rey; Berend-Jan Bosch; David Veesler
Journal:  J Virol       Date:  2018-01-30       Impact factor: 5.103

2.  Reactivity of Porcine Epidemic Diarrhea Virus Structural Proteins to Antibodies against Porcine Enteric Coronaviruses: Diagnostic Implications.

Authors:  Luis Gabriel Gimenez-Lirola; Jianqiang Zhang; Jose Antonio Carrillo-Avila; Qi Chen; Ronaldo Magtoto; Korakrit Poonsuk; David H Baum; Pablo Piñeyro; Jeffrey Zimmerman
Journal:  J Clin Microbiol       Date:  2017-02-15       Impact factor: 5.948

3.  Porcine deltacoronavirus enters cells via two pathways: A protease-mediated one at the cell surface and another facilitated by cathepsins in the endosome.

Authors:  Jialin Zhang; Jianfei Chen; Da Shi; Hongyan Shi; Xin Zhang; Jianbo Liu; Liyan Cao; Xiangdong Zhu; Ye Liu; Xiaobo Wang; Zhaoyang Ji; Li Feng
Journal:  J Biol Chem       Date:  2019-05-08       Impact factor: 5.157

4.  Isolation and Tissue Culture Adaptation of Porcine Deltacoronavirus: A Case Study.

Authors:  Hui Hu; Kwonil Jung; Scott P Kenney; Linda J Saif
Journal:  Methods Mol Biol       Date:  2020

5.  Discovery and Sequence Analysis of Four Deltacoronaviruses from Birds in the Middle East Reveal Interspecies Jumping with Recombination as a Potential Mechanism for Avian-to-Avian and Avian-to-Mammalian Transmission.

Authors:  Susanna K P Lau; Emily Y M Wong; Chi-Ching Tsang; Syed Shakeel Ahmed; Rex K H Au-Yeung; Kwok-Yung Yuen; Ulrich Wernery; Patrick C Y Woo
Journal:  J Virol       Date:  2018-07-17       Impact factor: 5.103

6.  Broad receptor engagement of an emerging global coronavirus may potentiate its diverse cross-species transmissibility.

Authors:  Wentao Li; Ruben J G Hulswit; Scott P Kenney; Ivy Widjaja; Kwonil Jung; Moyasar A Alhamo; Brenda van Dieren; Frank J M van Kuppeveld; Linda J Saif; Berend-Jan Bosch
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-14       Impact factor: 11.205

7.  Cryo-Electron Microscopy Structure of Porcine Deltacoronavirus Spike Protein in the Prefusion State

Authors:  Jian Shang; Yang Yang; Yusen Zhou; Yuan Zheng; Chang Liu; Qibin Geng; Wanbo Tai; Lanying Du; Wei Zhang; Fang Li
Journal:  J Virol       Date:  2018-02-15       Impact factor: 5.103

8.  A Computationally Designed Serological Assay for Porcine Epidemic Diarrhea Virus.

Authors:  Yunfeng Song; Pankaj Singh; Eric Nelson; Sheela Ramamoorthy
Journal:  J Clin Microbiol       Date:  2016-05-25       Impact factor: 5.948

9.  A portable, 3D printed, microfluidic device for multiplexed, real time, molecular detection of the porcine epidemic diarrhea virus, transmissible gastroenteritis virus, and porcine deltacoronavirus at the point of need.

Authors:  Mohamed El-Tholoth; Huiwen Bai; Michael G Mauk; Linda Saif; Haim H Bau
Journal:  Lab Chip       Date:  2021-02-02       Impact factor: 6.799

10.  The trypsin-enhanced infection of porcine epidemic diarrhea virus is determined by the S2 subunit of the spike glycoprotein.

Authors:  Yubei Tan; Limeng Sun; Gang Wang; Yuejun Shi; Wanyu Dong; Yanan Fu; Zhen Fu; Huanchun Chen; Guiqing Peng
Journal:  J Virol       Date:  2021-03-10       Impact factor: 5.103

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