Literature DB >> 25740648

Crystal structure of Hop2-Mnd1 and mechanistic insights into its role in meiotic recombination.

Hyun-Ah Kang1, Ho-Chul Shin2, Alexandra-Styliani Kalantzi3, Christopher P Toseland4, Hyun-Min Kim1, Stephan Gruber4, Matteo Dal Peraro3, Byung-Ha Oh5.   

Abstract

In meiotic DNA recombination, the Hop2-Mnd1 complex promotes Dmc1-mediated single-stranded DNA (ssDNA) invasion into homologous chromosomes to form a synaptic complex by a yet-unclear mechanism. Here, the crystal structure of Hop2-Mnd1 reveals that it forms a curved rod-like structure consisting of three leucine zippers and two kinked junctions. One end of the rod is linked to two juxtaposed winged-helix domains, and the other end is capped by extra α-helices to form a helical bundle-like structure. Deletion analysis shows that the helical bundle-like structure is sufficient for interacting with the Dmc1-ssDNA nucleofilament, and molecular modeling suggests that the curved rod could be accommodated into the helical groove of the nucleofilament. Remarkably, the winged-helix domains are juxtaposed at fixed relative orientation, and their binding to DNA is likely to perturb the base pairing according to molecular simulations. These findings allow us to propose a model explaining how Hop2-Mnd1 juxtaposes Dmc1-bound ssDNA with distorted recipient double-stranded DNA and thus facilitates strand invasion.
© The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25740648      PMCID: PMC4402518          DOI: 10.1093/nar/gkv172

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  58 in total

Review 1.  Mechanism and control of meiotic recombination initiation.

Authors:  S Keeney
Journal:  Curr Top Dev Biol       Date:  2001       Impact factor: 4.897

2.  A protein complex containing Mei5 and Sae3 promotes the assembly of the meiosis-specific RecA homolog Dmc1.

Authors:  Atsuko Hayase; Misato Takagi; Toshiko Miyazaki; Hiroyuki Oshiumi; Miki Shinohara; Akira Shinohara
Journal:  Cell       Date:  2004-12-29       Impact factor: 41.582

3.  Scalable molecular dynamics with NAMD.

Authors:  James C Phillips; Rosemary Braun; Wei Wang; James Gumbart; Emad Tajkhorshid; Elizabeth Villa; Christophe Chipot; Robert D Skeel; Laxmikant Kalé; Klaus Schulten
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

4.  The Amber biomolecular simulation programs.

Authors:  David A Case; Thomas E Cheatham; Tom Darden; Holger Gohlke; Ray Luo; Kenneth M Merz; Alexey Onufriev; Carlos Simmerling; Bing Wang; Robert J Woods
Journal:  J Comput Chem       Date:  2005-12       Impact factor: 3.376

5.  Endonucleolytic processing of covalent protein-linked DNA double-strand breaks.

Authors:  Matthew J Neale; Jing Pan; Scott Keeney
Journal:  Nature       Date:  2005-08-18       Impact factor: 49.962

6.  The Hop2 and Mnd1 proteins act in concert with Rad51 and Dmc1 in meiotic recombination.

Authors:  Galina V Petukhova; Roberto J Pezza; Filip Vanevski; Mickael Ploquin; Jean-Yves Masson; R Daniel Camerini-Otero
Journal:  Nat Struct Mol Biol       Date:  2005-04-17       Impact factor: 15.369

7.  Mouse Sycp1 functions in synaptonemal complex assembly, meiotic recombination, and XY body formation.

Authors:  Femke A T de Vries; Esther de Boer; Mike van den Bosch; Willy M Baarends; Marja Ooms; Li Yuan; Jian-Guo Liu; Albert A van Zeeland; Christa Heyting; Albert Pastink
Journal:  Genes Dev       Date:  2005-06-01       Impact factor: 11.361

8.  The budding yeast mei5 and sae3 proteins act together with dmc1 during meiotic recombination.

Authors:  Hideo Tsubouchi; G Shirleen Roeder
Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  The HHpred interactive server for protein homology detection and structure prediction.

Authors:  Johannes Söding; Andreas Biegert; Andrei N Lupas
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

View more
  19 in total

Review 1.  The biochemistry of early meiotic recombination intermediates.

Authors:  J Brooks Crickard; Eric C Greene
Journal:  Cell Cycle       Date:  2018-12-10       Impact factor: 4.534

Review 2.  Biochemical attributes of mitotic and meiotic presynaptic complexes.

Authors:  J Brooks Crickard; Eric C Greene
Journal:  DNA Repair (Amst)       Date:  2018-08-23

3.  Dynamic interactions of the homologous pairing 2 (Hop2)-meiotic nuclear divisions 1 (Mnd1) protein complex with meiotic presynaptic filaments in budding yeast.

Authors:  J Brooks Crickard; Youngho Kwon; Patrick Sung; Eric C Greene
Journal:  J Biol Chem       Date:  2018-11-12       Impact factor: 5.157

4.  Saccharomyces cerevisiae Red1 protein exhibits nonhomologous DNA end-joining activity and potentiates Hop1-promoted pairing of double-stranded DNA.

Authors:  Rucha Kshirsagar; Indrajeet Ghodke; K Muniyappa
Journal:  J Biol Chem       Date:  2017-06-22       Impact factor: 5.157

Review 5.  Repair of DNA double-strand breaks in plant meiosis: role of eukaryotic RecA recombinases and their modulators.

Authors:  Côme Emmenecker; Christine Mézard; Rajeev Kumar
Journal:  Plant Reprod       Date:  2022-06-01       Impact factor: 3.767

6.  Swi5-Sfr1 stimulates Rad51 recombinase filament assembly by modulating Rad51 dissociation.

Authors:  Chih-Hao Lu; Hsin-Yi Yeh; Guan-Chin Su; Kentaro Ito; Yumiko Kurokawa; Hiroshi Iwasaki; Peter Chi; Hung-Wen Li
Journal:  Proc Natl Acad Sci U S A       Date:  2018-10-08       Impact factor: 11.205

7.  The Arabidopsis HOP2 gene has a role in preventing illegitimate connections between nonhomologous chromosome regions.

Authors:  Yisell Farahani-Tafreshi; Chun Wei; Peilu Gan; Jenya Daradur; C Daniel Riggs; Clare A Hasenkampf
Journal:  Chromosome Res       Date:  2022-01-22       Impact factor: 5.239

8.  Structural prediction of protein models using distance restraints derived from cross-linking mass spectrometry data.

Authors:  Zsuzsanna Orbán-Németh; Rebecca Beveridge; David M Hollenstein; Evelyn Rampler; Thomas Stranzl; Otto Hudecz; Johannes Doblmann; Peter Schlögelhofer; Karl Mechtler
Journal:  Nat Protoc       Date:  2018-02-08       Impact factor: 13.491

9.  Meiotic nuclear divisions 1 (MND1) fuels cell cycle progression by activating a KLF6/E2F1 positive feedback loop in lung adenocarcinoma.

Authors:  Quanli Zhang; Run Shi; Yongkang Bai; Lijuan Meng; Jingwen Hu; Hongyu Zhu; Tongyan Liu; Xiaomeng De; Siwei Wang; Jie Wang; Lin Xu; Guoren Zhou; Rong Yin
Journal:  Cancer Commun (Lond)       Date:  2021-03-18

10.  Comprehensive Cross-Linking Mass Spectrometry Reveals Parallel Orientation and Flexible Conformations of Plant HOP2-MND1.

Authors:  Evelyn Rampler; Thomas Stranzl; Zsuzsanna Orban-Nemeth; David Maria Hollenstein; Otto Hudecz; Peter Schlögelhofer; Karl Mechtler
Journal:  J Proteome Res       Date:  2015-11-18       Impact factor: 4.466

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.