| Literature DB >> 25739087 |
Rui Zhong1, Tian-Bo Ding2, Jin-Zhi Niu3, Wen-Kai Xia4, Chong-Yu Liao5, Wei Dou6, Jin-Jun Wang7.
Abstract
The production and uptake of yolk protein play an important role in the reproduction of all oviparous organisms. Vitellogenin (Vg) is the precursor of vitellin (Vn), which is the major egg storage protein, and vitellogenin receptor (VgR) is a necessary protein for the uptake of Vg into developing oocytes. In this paper, we characterize the full-length Vg and VgR, PcVg1 and PcVgR, respectively, of the citrus red mite Panonychus citri (McGregor). The PcVg1 cDNA is 5748 nucleotides (nt) with a 5553-nt open reading frame (ORF) coding for 1851 amino acids (aa), and the PcVgR is 6090 nt, containing an intact ORF of 5673 nt coding an expected protein of 1891 aa. The PcVg1 aa sequence shows a typical GLCG domain and several K/RXXR cleavage sites, and PcVgR comprises two ligand-binding domains, two epidermal growth factor (EGF)-like regions containing YWTD motifs, a transmembrane domain, and a cytoplasmic domain. An analysis of the aa sequences and phylogenetics implied that both genes were genetically distinct from those of ticks and insects. The transcriptional profiles determined by real-time quantitative PCR in different developmental stages showed that both genes present the same expressional tendencies in eggs, larvae, nymphs, and adults. This suggested that the biosynthesis and uptake of PcVg occurs coordinately. The strong reproductive capacity of P. citri has been hypothesized as an important factor in its resistance; consequently, understanding the molecular mechanisms regulating Vg and VgR are fundamental for mite control.Entities:
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Year: 2015 PMID: 25739087 PMCID: PMC4394447 DOI: 10.3390/ijms16034759
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
Figure 1Schematic comparison of the primary protein structures of Panonychus citri vitellogenin 1 (PcVg1) with those of other arthropod species. The percentage identity compared to PcVg1 for the specific domain is shown. The ratio (%) on the right side indicates the overall identity as compared with the PcVg1. S, signal peptide; LPD_N, N-terminal lipoprotein domain; DUF1943, a domain of unknown function; vWD, von Willerand Factor type D domain. Sequences were taken from the Tetranychus urticae genome and GenBank database (accession ID or No. in parentheses): TuVg, T. urticae (tetur27g01310); VdVg1, Varroa destructor (JQ974976); DvVg, Dermacentor variabilis (AY885250); HlVg1, Haemaphysalis longicornis (AB359899); AaVgB, Aedes aegypti (AAQ92367); and RmVg2, Rhyparobia maderae (BAD72597).
Figure 3Phylogenetic relationship of vitellogenin 1 (PcVg1, ▲) (A) and vitellogenin receptor (PcVgR, ▲) (B) of Panonychus citri with those of other arthropod species. The phylogenetic tree was inferred using the neighbor-joining method. Numbers above the branches are bootstrap support values. The labels are organism names and GenBank accession numbers or Gene IDs.
Figure 2Schematic comparison of the primary protein structures of Panonychus citri vitellogenin receptor (PcVgR) with those of other arthropod species. The cysteine-rich repeats in the ligand binding domains (LBDs) are shown with numbers 1–8. The cysteine-rich repeats in the epidermal growth factor (EGF)-precursor domains are indicated with letters A–D. The percentage identity compared with PcVgR in a specific domain is shown. The ratio (%) on the right side indicates the overall identity as compared with PcVgR. S, signal peptide; O, O-linked sugar domain; T, transmembrane region; C, cytoplasmic tail. Sequences were taken from the Tetranychus urticae genome and GenBank database (accession ID or No. in parentheses): TuVgR, T. urticae (tetur27g01310); DvVgR, Dermacentor variabilis (DQ103506); HlVgR, Haemaphysalis longicornis (AB299015); AaVgR, Aedes aegypti (L77800); DmYPR, Drosophila melanogaster (DMU13637); and GgVgR, Gallus gallus (X80207).
Figure 4Expression profiles analysis of vitellogenin 1 (PcVg1) (A) and vitellogenin receptor (PcVgR) (B) of Panonychus citri at different developmental stages. The results are shown as the mean ± SE (n = 3). Different letters on the error bars indicate significant differences among the developmental stages. Significant differences between four developmental stages were assayed by one-way analysis of variance (ANOVA) with a p-value < 0.05.
Primers used for cloning.
| Experiments | Primer Names and Sequences (5' to 3') | Product Length (bp) |
|---|---|---|
| 3'-RACE | Vg1-S1: GGTCATTCCGAACTCTTTCC | 1939 |
| Vg1-S2: AGACGGTACCCACTACAACG | 1941 | |
| VgR-S1: ACATTTAGAGCCATTCGG | 454 | |
| VgR-S2: CCAGTGAGTTTGGACGAT | 303 | |
| 5'-RACE | Vg1-A1: TTCAGCGAGAACCATTTGGA | 1552 |
| Vg1-A2: TGAGTGTTCGGTGTTGGTGA | 1468 | |
| VgR-A1: ATCGAGGTGATTCATCGTCA | 1089 | |
| VgR-A2: TGAGCCATCGAAACAATCCT | 938 | |
| Splicing primer | VgR-S-S1: ACCCTGAGAAAGGTCTTATG | |
| VgR-S-A1: CAATGAAGGAGCACAATGT | 1481 | |
| VgR-S-S2: GTGCAATTACCTGTCCAC | ||
| VgR-S-A2: CAACCCAATAAATCATTTTC | 1197 | |
| Oligo (dT) primer | UPM:CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT | |
| NUP: AAGCAGTGGTATCAACGCAGAGT | ||
| Full-length confirmation | Vg1-F-S1: TCGAACATGAAGATCGCTC | |
| Vg1-F-A1: GTGAGTTCCTTAAGAGCCAAGT | 1952 | |
| Vg1-F-S2: TCAGACTCACAAATCGATTACC | ||
| Vg1-F-A2: TCTTCGTGGGCAAGAGTT | 2267 | |
| Vg1-F-S3: AATACATCGCTAACCTTACCTG | ||
| Vg1-F-A3: GAGATGATTTAAATGCCTCG | 1682 | |
| VgR-F-S1: CTCAAAATGTGGCCTAAACTAGTC | ||
| VgR-F-A1: TCGGGGATAAAACTGGATG | 1909 | |
| VgR-F-S2: TCTCGTCGTGGTCGTTCA | ||
| VgR-F-A2: CCTCGTCCTCCTGGTTAACAC | 1873 | |
| VgR-F-S3: GTTGCTCTGATGGTCATTGT | ||
| VgR-F-A3: TTAAACTTTTATAAAAACACGTTGG | 2096 |
The DNAMAN software (DNAMAN 6.0.3, Lynnon BioSoft, Quebec, QC, Canada) was used to assemble the cloned genes’ cDNA fragments to putative full-length PcVg1 and PcVgR sequences. Then, primer pairs were designed to amplify the open reading frames (ORF). Three specific primer pairs (Table 1) were used to confirm the ORF of each gene.
Primers used for qPCR.
| Genes | GenBank No. | Primer Names and Sequences (5' to 3') | Amplicon Sizes (bp) | Amplification Efficiency (%) |
|---|---|---|---|---|
| KC978893 | Vg1-RTS: GCCTCAAACGAAGCTCAATC | 183 | 97.7 | |
| Vg1-RTA: AGCCAAAGCGTCGAGTAAAA | ||||
| KC978894 | VgR-RTS: TTGTTTCGATGGCTCAGATG | 150 | 108.9 | |
| VgR-RTA: TCACCGTGTGGACAATCAGT | ||||
| HM582445 | GAP-RTS: CTTTGGCCAAGGTCATCAAT | 159 | 108.1 | |
| GAP-RTA: CGGTAGCGGCAGGTATAATG |