Literature DB >> 25734422

Role and structural characterization of plant aldehyde dehydrogenases from family 2 and family 7.

Radka Končitíková1, Armelle Vigouroux2, Martina Kopečná1, Tomáš Andree3, Jan Bartoš4, Marek Šebela1, Solange Moréra2, David Kopečný1.   

Abstract

Aldehyde dehydrogenases (ALDHs) are responsible for oxidation of biogenic aldehyde intermediates as well as for cell detoxification of aldehydes generated during lipid peroxidation. So far, 13 ALDH families have been described in plants. In the present study, we provide a detailed biochemical characterization of plant ALDH2 and ALDH7 families by analysing maize and pea ALDH7 (ZmALDH7 and PsALDH7) and four maize cytosolic ALDH(cALDH)2 isoforms RF2C, RF2D, RF2E and RF2F [the first maize ALDH2 was discovered as a fertility restorer (RF2A)]. We report the crystal structures of ZmALDH7, RF2C and RF2F at high resolution. The ZmALDH7 structure shows that the three conserved residues Glu(120), Arg(300) and Thr(302) in the ALDH7 family are located in the substrate-binding site and are specific to this family. Our kinetic analysis demonstrates that α-aminoadipic semialdehyde, a lysine catabolism intermediate, is the preferred substrate for plant ALDH7. In contrast, aromatic aldehydes including benzaldehyde, anisaldehyde, cinnamaldehyde, coniferaldehyde and sinapaldehyde are the best substrates for cALDH2. In line with these results, the crystal structures of RF2C and RF2F reveal that their substrate-binding sites are similar and are formed by an aromatic cluster mainly composed of phenylalanine residues and several nonpolar residues. Gene expression studies indicate that the RF2C gene, which is strongly expressed in all organs, appears essential, suggesting that the crucial role of the enzyme would certainly be linked to the cell wall formation using aldehydes from phenylpropanoid pathway as substrates. Finally, plant ALDH7 may significantly contribute to osmoprotection because it oxidizes several aminoaldehydes leading to products known as osmolytes.

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Year:  2015        PMID: 25734422     DOI: 10.1042/BJ20150009

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  17 in total

1.  Structural and Biochemical Characterization of Aldehyde Dehydrogenase 12, the Last Enzyme of Proline Catabolism in Plants.

Authors:  David A Korasick; Radka Končitíková; Martina Kopečná; Eva Hájková; Armelle Vigouroux; Solange Moréra; Donald F Becker; Marek Šebela; John J Tanner; David Kopečný
Journal:  J Mol Biol       Date:  2018-12-21       Impact factor: 5.469

2.  Importance of the C-Terminus of Aldehyde Dehydrogenase 7A1 for Oligomerization and Catalytic Activity.

Authors:  David A Korasick; Jesse W Wyatt; Min Luo; Adrian R Laciak; Kasi Ruddraraju; Kent S Gates; Michael T Henzl; John J Tanner
Journal:  Biochemistry       Date:  2017-11-07       Impact factor: 3.162

3.  Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer.

Authors:  Li-Kai Liu; John J Tanner
Journal:  J Mol Biol       Date:  2018-12-07       Impact factor: 5.469

4.  Structural and biochemical consequences of pyridoxine-dependent epilepsy mutations that target the aldehyde binding site of aldehyde dehydrogenase ALDH7A1.

Authors:  Adrian R Laciak; David A Korasick; Jesse W Wyatt; Kent S Gates; John J Tanner
Journal:  FEBS J       Date:  2019-07-25       Impact factor: 5.542

5.  Silencing CHALCONE SYNTHASE in Maize Impedes the Incorporation of Tricin into Lignin and Increases Lignin Content.

Authors:  Nubia B Eloy; Wannes Voorend; Wu Lan; Marina de Lyra Soriano Saleme; Igor Cesarino; Ruben Vanholme; Rebecca A Smith; Geert Goeminne; Andreas Pallidis; Kris Morreel; José Nicomedes; John Ralph; Wout Boerjan
Journal:  Plant Physiol       Date:  2016-12-09       Impact factor: 8.340

6.  The plant pathogen enzyme AldC is a long-chain aliphatic aldehyde dehydrogenase.

Authors:  Soon Goo Lee; Kate Harline; Orchid Abar; Sakirat O Akadri; Alexander G Bastian; Hui-Yuan S Chen; Michael Duan; Caroline M Focht; Amanda R Groziak; Jesse Kao; Jagdeesh S Kottapalli; Matthew C Leong; Joy J Lin; Regina Liu; Joanna E Luo; Christine M Meyer; Albert F Mo; Seong Ho Pahng; Vinay Penna; Chris D Raciti; Abhinav Srinath; Shwetha Sudhakar; Joseph D Tang; Brian R Cox; Cynthia K Holland; Barrie Cascella; Wilhelm Cruz; Sheri A McClerkin; Barbara N Kunkel; Joseph M Jez
Journal:  J Biol Chem       Date:  2020-08-12       Impact factor: 5.157

7.  NAD+ promotes assembly of the active tetramer of aldehyde dehydrogenase 7A1.

Authors:  David A Korasick; Tommi A White; Srinivas Chakravarthy; John J Tanner
Journal:  FEBS Lett       Date:  2018-09-18       Impact factor: 4.124

8.  Structural analysis of pathogenic mutations targeting Glu427 of ALDH7A1, the hot spot residue of pyridoxine-dependent epilepsy.

Authors:  Adrian R Laciak; David A Korasick; Kent S Gates; John J Tanner
Journal:  J Inherit Metab Dis       Date:  2019-12-01       Impact factor: 4.982

9.  Active Sites of Reduced Epidermal Fluorescence1 (REF1) Isoforms Contain Amino Acid Substitutions That Are Different between Monocots and Dicots.

Authors:  Tagnon D Missihoun; Simeon O Kotchoni; Dorothea Bartels; Peta Bonham-Smith
Journal:  PLoS One       Date:  2016-10-31       Impact factor: 3.240

10.  Structural Basis of Substrate Recognition by Aldehyde Dehydrogenase 7A1.

Authors:  Min Luo; John J Tanner
Journal:  Biochemistry       Date:  2015-08-19       Impact factor: 3.162

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