Literature DB >> 25729943

imDC: an ensemble learning method for imbalanced classification with miRNA data.

C Y Wang1, L L Hu2, M Z Guo3, X Y Liu3, Q Zou2.   

Abstract

Imbalances typically exist in bioinformatics and are also common in other areas. A drawback of traditional machine learning methods is the relatively little attention given to small sample classification. Thus, we developed imDC, which uses an ensemble learning concept in combination with weights and sample misclassification information to effectively classify imbalanced data. Our method showed better results when compared to other algorithms with UCI machine learning datasets and microRNA data.

Mesh:

Substances:

Year:  2015        PMID: 25729943     DOI: 10.4238/2015.January.15.15

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  15 in total

1.  Twenty years of bioinformatics research for protease-specific substrate and cleavage site prediction: a comprehensive revisit and benchmarking of existing methods.

Authors:  Fuyi Li; Yanan Wang; Chen Li; Tatiana T Marquez-Lago; André Leier; Neil D Rawlings; Gholamreza Haffari; Jerico Revote; Tatsuya Akutsu; Kuo-Chen Chou; Anthony W Purcell; Robert N Pike; Geoffrey I Webb; A Ian Smith; Trevor Lithgow; Roger J Daly; James C Whisstock; Jiangning Song
Journal:  Brief Bioinform       Date:  2019-11-27       Impact factor: 11.622

2.  Human Protein Subcellular Localization with Integrated Source and Multi-label Ensemble Classifier.

Authors:  Xiaotong Guo; Fulin Liu; Ying Ju; Zhen Wang; Chunyu Wang
Journal:  Sci Rep       Date:  2016-06-21       Impact factor: 4.379

3.  DNA binding protein identification by combining pseudo amino acid composition and profile-based protein representation.

Authors:  Bin Liu; Shanyi Wang; Xiaolong Wang
Journal:  Sci Rep       Date:  2015-10-20       Impact factor: 4.379

Review 4.  Long Noncoding RNA Identification: Comparing Machine Learning Based Tools for Long Noncoding Transcripts Discrimination.

Authors:  Siyu Han; Yanchun Liang; Ying Li; Wei Du
Journal:  Biomed Res Int       Date:  2016-11-29       Impact factor: 3.411

5.  Peculiar Genes Selection: A new features selection method to improve classification performances in imbalanced data sets.

Authors:  Federica Martina; Marco Beccuti; Gianfranco Balbo; Francesca Cordero
Journal:  PLoS One       Date:  2017-08-14       Impact factor: 3.240

6.  Predicting diabetes mellitus using SMOTE and ensemble machine learning approach: The Henry Ford ExercIse Testing (FIT) project.

Authors:  Manal Alghamdi; Mouaz Al-Mallah; Steven Keteyian; Clinton Brawner; Jonathan Ehrman; Sherif Sakr
Journal:  PLoS One       Date:  2017-07-24       Impact factor: 3.240

7.  Detecting representative data and generating synthetic samples to improve learning accuracy with imbalanced data sets.

Authors:  Der-Chiang Li; Susan C Hu; Liang-Sian Lin; Chun-Wu Yeh
Journal:  PLoS One       Date:  2017-08-03       Impact factor: 3.240

8.  Adaptive Swarm Balancing Algorithms for rare-event prediction in imbalanced healthcare data.

Authors:  Jinyan Li; Lian-Sheng Liu; Simon Fong; Raymond K Wong; Sabah Mohammed; Jinan Fiaidhi; Yunsick Sung; Kelvin K L Wong
Journal:  PLoS One       Date:  2017-07-28       Impact factor: 3.240

9.  Identification of Multi-Functional Enzyme with Multi-Label Classifier.

Authors:  Yuxin Che; Ying Ju; Ping Xuan; Ren Long; Fei Xing
Journal:  PLoS One       Date:  2016-04-14       Impact factor: 3.240

10.  Protein Remote Homology Detection Based on an Ensemble Learning Approach.

Authors:  Junjie Chen; Bingquan Liu; Dong Huang
Journal:  Biomed Res Int       Date:  2016-05-08       Impact factor: 3.411

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.