Literature DB >> 25727049

Kinetics effects and modeling of mRNA turnover.

Maria Concetta Palumbo1, Lorenzo Farina, Paola Paci.   

Abstract

Broader comprehension of gene expression regulatory mechanisms can be gained from a global analysis of how transcription and degradation are coordinated to orchestrate complex cell responses. The role of messenger RNA (mRNA) turnover modulation in gene expression levels has become increasingly recognized. From such perspective, in this review we briefly illustrate how a simple but effective mathematical model of mRNA turnover and some experimental findings, may together shed light on the molecular mechanisms underpinning the major role of mRNA decay rates in shaping the kinetics of gene activation and repression.
© 2015 John Wiley & Sons, Ltd.

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Year:  2015        PMID: 25727049     DOI: 10.1002/wrna.1277

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev RNA        ISSN: 1757-7004            Impact factor:   9.957


  6 in total

1.  StaRTrEK:in silico estimation of RNA half-lives from genome-wide time-course experiments without transcriptional inhibition.

Authors:  Federica Conte; Federico Papa; Paola Paci; Lorenzo Farina
Journal:  BMC Bioinformatics       Date:  2022-05-20       Impact factor: 3.307

2.  Long-living RNA in the CNS of terrestrial snail.

Authors:  Victor N Ierusalimsky; Pavel M Balaban
Journal:  RNA Biol       Date:  2017-12-21       Impact factor: 4.652

3.  The CELF1 RNA-Binding Protein Regulates Decay of Signal Recognition Particle mRNAs and Limits Secretion in Mouse Myoblasts.

Authors:  Joseph Russo; Jerome E Lee; Carolina M López; John Anderson; Thuy-Mi P Nguyen; Adam M Heck; Jeffrey Wilusz; Carol J Wilusz
Journal:  PLoS One       Date:  2017-01-27       Impact factor: 3.240

Review 4.  Writing a wrong: Coupled RNA polymerase II transcription and RNA quality control.

Authors:  Sarah A Peck; Katlyn D Hughes; Jose F Victorino; Amber L Mosley
Journal:  Wiley Interdiscip Rev RNA       Date:  2019-03-07       Impact factor: 9.957

5.  Regulation of the Na+/K+-ATPase Ena1 Expression by Calcineurin/Crz1 under High pH Stress: A Quantitative Study.

Authors:  Silvia Petrezsélyová; María López-Malo; David Canadell; Alicia Roque; Albert Serra-Cardona; M Carmen Marqués; Ester Vilaprinyó; Rui Alves; Lynne Yenush; Joaquín Ariño
Journal:  PLoS One       Date:  2016-06-30       Impact factor: 3.240

6.  The CCR4-NOT complex maintains liver homeostasis through mRNA deadenylation.

Authors:  Akinori Takahashi; Toru Suzuki; Shou Soeda; Shohei Takaoka; Shungo Kobori; Tomokazu Yamaguchi; Haytham Mohamed Aly Mohamed; Akiko Yanagiya; Takaya Abe; Mayo Shigeta; Yasuhide Furuta; Keiji Kuba; Tadashi Yamamoto
Journal:  Life Sci Alliance       Date:  2020-04-01
  6 in total

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