Literature DB >> 25724090

Whole genome sequencing and phylogenetic analysis of feline anelloviruses.

Veronika Jarošová1, Kristýna Hrazdilová1, Zita Filipejová2, Pavel Schánilec2, Vladimír Celer3.   

Abstract

Torque teno felis virus (FcTTV) was detected in the cat population in the Czech Republic. A total of 110 serum samples were tested by a nested PCR technique using specific primers, situated in the highly conserved untranslated region of the virus genome. The frequency of feline TT virus in the Czech Republic was found to be 33.63%. Sequencing of PCR product from several virus strains showed that all of them are closely related and belong to the same virus species. Whole genome sequencing of three strains was performed to compare overall genetic heterogeneity of feline TT viruses. One of these three strains showed more that 10% difference at the nucleotide level. Furthermore we didn't find any correlation between FcTTV infection and sex or health status of examined animals.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Anelloviruses; Cats; Genome sequencing; Prevalence

Mesh:

Substances:

Year:  2015        PMID: 25724090     DOI: 10.1016/j.meegid.2015.02.015

Source DB:  PubMed          Journal:  Infect Genet Evol        ISSN: 1567-1348            Impact factor:   3.342


  3 in total

1.  Detection of severe fever with thrombocytopenia syndrome virus and other viruses in cats via unbiased next-generation sequencing.

Authors:  Yasuyuki Momoi; Aya Matsuu
Journal:  J Vet Diagn Invest       Date:  2020-10-21       Impact factor: 1.279

2.  Identification and genomic characterization of a novel species of feline anellovirus.

Authors:  Wen Zhang; Hua Wang; Yan Wang; Zhijian Liu; Jingjiao Li; Lianghua Guo; Shixing Yang; Quan Shen; Xiaoying Zhao; Li Cui; Xiuguo Hua
Journal:  Virol J       Date:  2016-08-27       Impact factor: 4.099

3.  A virome sequencing approach to feline oral squamous cell carcinoma to evaluate viral causative factors.

Authors:  Shirley Chu; Todd N Wylie; Kristine M Wylie; Gayle C Johnson; Zachary L Skidmore; Maren Fleer; Obi L Griffith; Jeffrey N Bryan
Journal:  Vet Microbiol       Date:  2019-11-02       Impact factor: 3.293

  3 in total

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