Literature DB >> 25716951

Nocardioides deserti sp. nov., an actinobacterium isolated from desert soil.

Li Tuo1, Yan-Ping Dong2,1, Xugela Habden3, Jia-Meng Liu1, Lin Guo1, Xian-Fu Liu4, Li Chen4, Zhong-Ke Jiang1, Shao-Wei Liu1, Yu-Bin Zhang2, Yu-Qin Zhang1, Cheng-Hang Sun1.   

Abstract

A rod- or coccus-shaped, non-spore-forming actinobacterium, designated strain SC8A-24(T), was isolated from a soil sample collected from the rhizosphere of Alhagi sparsifolia on the southern edge of the Taklimakan desert, Xinjiang, China, and examined by a polyphasic approach to clarify its taxonomic position. This actinobacterium was Gram-staining-positive and aerobic. Substrate and aerial mycelia were not observed, and no diffusible pigments were observed on the media tested. Strain SC8A-24(T) grew optimally without NaCl at 28-30 °C and pH 7.0-8.0. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SC8A-24(T) belonged to the genus Nocardioides and shared the highest 16S rRNA gene sequence similarity with Nocardioides salarius CL-Z59(T) (96.51%), N. pyridinolyticus OS4(T) (96.43%) and N. ginsengagri BX5-10(T) (96.37%). The DNA G+C content of strain SC8A-24(T) was 71 mol%. The cell-wall peptidoglycan contained ll-2,6-diaminopimelic acid, and MK-8(H4) was the predominant menaquinone. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol, an unidentified glycolipid and an unidentified phospholipid. The major fatty acids were C17 : 1ω8c, 10-methyl C17 : 0 and C18 : 1ω9c. On the basis of phylogenetic analysis and phenotypic and chemotaxonomic characteristics, strain SC8A-24(T) represents a novel species of the genus Nocardioides , for which the name Nocardioides deserti sp. nov. is proposed. The type strain is SC8A-24(T) ( =DSM 26045(T)  = CGMCC 4.7183(T)).
© 2015 IUMS.

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Year:  2015        PMID: 25716951     DOI: 10.1099/ijs.0.000147

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  4 in total

1.  Description of Nocardioides piscis sp. nov., Sphingomonas piscis sp. nov. and Sphingomonas sinipercae sp. nov., isolated from the intestine of fish species Odontobutis interrupta (Korean spotted sleeper) and Siniperca scherzeri (leopard mandarin fish).

Authors:  Dong-Wook Hyun; Yun-Seok Jeong; Jae-Yun Lee; Hojun Sung; So-Yeon Lee; Jee-Won Choi; Hyun Sik Kim; Pil Soo Kim; Jin-Woo Bae
Journal:  J Microbiol       Date:  2021-04-20       Impact factor: 3.422

Review 2.  Actinobacteria from Arid and Desert Habitats: Diversity and Biological Activity.

Authors:  Fatemeh Mohammadipanah; Joachim Wink
Journal:  Front Microbiol       Date:  2016-01-28       Impact factor: 5.640

3.  Nocardioides astragali sp. nov., isolated from a nodule of wild Astragalus chrysopterus in northwestern China.

Authors:  Lin Xu; Yong Zhang; Chongyang Li; Xiaoqin Wang; Jinrong Liu; Ville-Petri Friman
Journal:  Antonie Van Leeuwenhoek       Date:  2018-01-25       Impact factor: 2.271

Review 4.  Actinobacteria From Desert: Diversity and Biotechnological Applications.

Authors:  Feiyang Xie; Wasu Pathom-Aree
Journal:  Front Microbiol       Date:  2021-12-09       Impact factor: 5.640

  4 in total

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