Literature DB >> 25708635

Multivariate ToF-SIMS image analysis of polymer microarrays and protein adsorption.

Andrew L Hook1, Philip M Williams1, Morgan R Alexander1, David J Scurr1.   

Abstract

The complexity of hyperspectral time of flight secondary ion mass spectrometry (ToF-SIMS) datasets makes their subsequent analysis and interpretation challenging, and is often an impasse to the identification of trends and differences within large sample-sets. The application of multivariate data analysis has become a routine method to successfully deconvolute and analyze objectively these datasets. The advent of high-resolution large area ToF-SIMS imaging capability has enlarged further the data handling challenges. In this work, a modified multivariate curve resolution image analysis of a polymer microarray containing 70 different poly(meth)acrylate type spots (over a 9.2 × 9.2 mm area) is presented. This analysis distinguished key differences within the polymer library such as the differentiation between acrylate and methacrylate polymers and variance specific to side groups. Partial least squares (PLS) regression analysis was performed to identify correlations between the ToF-SIMS surface chemistry and the protein adsorption. PLS analysis identified a number of chemical moieties correlating with high or low protein adsorption, including ions derived from the polymer backbone and polyethylene glycol side-groups. The retrospective validation of the findings from the PLS analysis was also performed using the secondary ion images for those ions found to significantly contribute to high or low protein adsorption.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25708635     DOI: 10.1116/1.4906484

Source DB:  PubMed          Journal:  Biointerphases        ISSN: 1559-4106            Impact factor:   2.456


  4 in total

Review 1.  Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry.

Authors:  Nico Verbeeck; Richard M Caprioli; Raf Van de Plas
Journal:  Mass Spectrom Rev       Date:  2019-10-11       Impact factor: 10.946

2.  The impact of detergents on the tissue decellularization process: A ToF-SIMS study.

Authors:  Lisa J White; Adam J Taylor; Denver M Faulk; Timothy J Keane; Lindsey T Saldin; Janet E Reing; Ilea T Swinehart; Neill J Turner; Buddy D Ratner; Stephen F Badylak
Journal:  Acta Biomater       Date:  2016-12-16       Impact factor: 8.947

3.  ToF-SIMS and Machine Learning for Single-Pixel Molecular Discrimination of an Acrylate Polymer Microarray.

Authors:  Wil Gardner; Andrew L Hook; Morgan R Alexander; Davide Ballabio; Suzanne M Cutts; Benjamin W Muir; Paul J Pigram
Journal:  Anal Chem       Date:  2020-04-13       Impact factor: 6.986

4.  ToF-SIMS analysis of a polymer microarray composed of poly(meth)acrylates with C6 derivative pendant groups.

Authors:  Andrew L Hook; David J Scurr
Journal:  Surf Interface Anal       Date:  2016-02-19       Impact factor: 1.607

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.