| Literature DB >> 25700628 |
Zahra Armingohar1, Jørgen J Jørgensen2, Anne K Kristoffersen3, Karl Schenck3, Zlatko Dembic3.
Abstract
BACKGROUND: Chronic periodontitis (CP), atherosclerotic and aortic aneurysmal vascular diseases (VD) are chronic inflammatory conditions with multifactorial etiologies, including involvement of predisposing genetic factors. In a previous study, polymorphisms in the gene for the anti-inflammatory interleukin-1 receptor antagonist were associated with CP in patients with VD.Entities:
Keywords: IL10 SNP; periodontal disease; vascular disease
Year: 2015 PMID: 25700628 PMCID: PMC4336353 DOI: 10.3402/jom.v7.26051
Source DB: PubMed Journal: J Oral Microbiol ISSN: 2000-2297 Impact factor: 5.474
Demographic data of the patients with atherosclerotic and aortic aneurysmal vascular diseases (VD) with (w/) and without (wo/) chronic periodontitis (CP)
| VD w/CP | VD wo/CP | |
|---|---|---|
| Age |
|
|
| Mean±SD | 67.9±6.9 | 71.1±7.8 |
| Median (min–max) | 67.6 (51.3–85.0) | 71.2 (55.4–84.8) |
| Gender ( | ||
| Male | 29 | 30 |
| Female | 6 | 7 |
| Teeth ( | ||
| Mean±SD | 18.5±7.4 | 24.9±2.3 |
| Median (min–max) | 20 (4–28) | 25 (20–29) |
| Periodontal pocket probing depth ( | ||
| Mean±SD | 15.6±10.9 | 0.7±0.99 |
| Median (min–max) | 11 (4–55) | 0 (0–3) |
| Diabetes ( | 3 | 13 |
| Smoking ( | ||
| Non-smokers | 1 | 9 |
| Current or previously smokers | 34 | 28 |
| Pack-year Mean±SD | 37.0±19.6 | 25.1±14.5 |
| Pack-year Median (min–max) | 34.7 (4.9–88.0) | 23.6 (3.1–51.3) |
| Body mass index (kg/m2) | ||
| Mean±SD | 26.4±4.2 | 27.0±4.5 |
| Median (min–max) | 26.4 (14.2–35.3) | 26.5 (18.3–37.0) |
Primer and probe sequences used to detect nucleotide polymorphisms in this study
| Gene | Location | Polymorphism | Primers/Probes |
|---|---|---|---|
| IL10 | Promoter | SNP −592 C>A (rs1800872) | VIC/FAM: CTTTCCAGAGACTGGCTTCCTACAG |
| IL10 | Promoter | SNP −819 C>T (rs1800871) | Fw: 5′ GGCACTGGTGTACCCTTGTA 3′ |
| Rv: 5′ CATGACCCCTACCGTCTCTATTTT 3′ | |||
| FAM: 5′ AGGCACAGAGATATTACAT 3′ | |||
| VIC: 5′ AGGCACAGAGATGTTACAT 3′ | |||
| IL10 | Promoter | SNP −1,082 A>G (rs1800896) | VIC/FAM: TCCTCTTACCTATCCCTACTTCCCC |
SNP, single nucleotide polymorphism; Fw, forward primer; Rv, reverse primer.
Taqman probes are listed with the polymorphic bases in bold.
Allele and genotype frequencies within the IL10 gene locus in patients with atherosclerotic and aortic aneurysmal vascular disease (VD) with (w/) or without (wo/) chronic periodontitis (CP)
| Allele frequency | |||||
|---|---|---|---|---|---|
|
| |||||
| VD w/CP | VD wo/CP |
| |||
| IL10 | SNP −1082 rs1800896 |
|
| ||
| 1 | A | 0.53 (37) | 0.64 (47) | 0.2 | |
| 2 | G | 0.47 (33) | 0.36 (27) | ||
| IL10 | SNP −819 rs1800871 |
|
| ||
| 1 |
|
|
|
| |
| 2 |
|
|
| ||
| IL10 | SNP −592 rs1800872 |
|
| ||
| 1 |
|
|
|
| |
| 2 |
|
|
| ||
| VD w/CP | VD wo/CP | Genotype frequency |
| ||
| IL10 | SNP −1082 rs1800896 |
|
| ||
| 1/1 | A/A | 0.26 (9) | 0.35 (13) | 0.39 | 0.23 |
| 1/2 | A/G | 0.54 (19) | 0.57 (21) | 0.83 | 0.94 |
| 2/2 | G/G | 0.20 (7) | 0.08 (3) | 0.18 | 0.14 |
| IL10 | SNP −819 rs1800871 |
|
| ||
| 1/1 |
|
|
|
|
|
| 1/2 |
|
|
|
|
|
| 2/2 | T/T | 0.06 (2) | 0.08 (3) | 1 | 0.8 |
| IL10 | SNP −592 rs1800872 |
|
| ||
| 1/1 |
|
|
|
|
|
| 1/2 |
|
|
|
|
|
| 2/2 | A/A | 0.06 (2) | 0.08 (3) | 1 | 0.8 |
SNP, single nucleotide polymorphism.
Allele designation (1= more frequent, major allele; 2=less frequent, minor allele).
Genotype designations.
Number of alleles and genotypes in parentheses.
OR=0.52, 95% CI=1.003–4.42.
OR=2.23, 95% CI=1.07–4.68.
OR=3.12, 95% CI=1.19–8.2.
OR=3.69, 95% CI=1.2–11.4.
OR=0.35, 95% CI=0.13–0.92.
OR=0.28, 95% CI=0.09–0.88.
OR=3.53, 95% CI=1.33–9.31.
OR=4.0, 95% CI=1.28–12.35.
OR=0.31, 95% CI=0.12–0.82.
OR=0.26, 95% CI=0.08–0.82.
In the binary logistic regression model the genotypic differences were adjusted for the effect of age, gender, body mass index, diabetes, and smoking status.
Estimated IL10 locus haplotype frequencies in patients with atherosclerotic and aortic aneurysmal vascular disease (VD) with (w/) or without (wo/) chronic periodontitis (CP)a
| Haplotype designations | VD w/CP | VD wo/CP |
| OR (95% CI) | |||
|---|---|---|---|---|---|---|---|
|
|
|
| |||||
| Numeric | Other | Frequency group | ( | Frequency group | ( | ||
| 211 | G-C-C | 0.471 | (33) | 0.365 | (27) | 0.195 | |
| 111 | A-C-C | 0.314 | (22) | 0.257 | (19) | 0.445 | |
|
|
|
|
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|
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| OR =0.47 (CI=0.21–1.06) |
| 112 | A-C-A | 0 | (0) | 0.014 | (1) | 1 | |
Estimation of population frequencies of predicted haplotypes.
IL10 (−1,082), IL10 (−819), and IL10 (−592) haplotype designation.
Nucleotide designation of listed SNP allele numbers.