Literature DB >> 25697422

Protein expression profiling in head fragments during planarian regeneration after amputation.

Xiaoguang Chen1, Cunshuan Xu.   

Abstract

Following amputation, a planarian tail fragment can regrow into a complete organism including a well-organized brain within about 2-3 weeks, thus restoring the structure and function to presurgical levels. Despite the enormous potential of these animals for regenerative medicine, our understanding of the exact mechanism of planarian regeneration is incomplete. To better understand the molecular nature of planarian head regeneration, we applied two-dimensional electrophoresis (2-DE)/matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF)/time-of-flight mass spectrometry (TOF MS) technique to analyze the dynamic proteomic expression profiles over the course of 6 to 168 h post-decapitation. This approach identified a total of 141 differentially expressed proteins, 47 of which exhibited exceptionally high fold changes (≥3-fold change). Of these, Rx protein, an important regulator of head and brain development, was considered to be closely related to planarian head regeneration because of its exceptional high expression almost throughout the time course of regeneration process. Functional annotation analysis classified the 141 proteins into eight categories: (1) signaling, (2) Ca(2+) binding and translocation, (3) transcription and translation, (4) cytoskeleton, (5) metabolism, (6) cell protection, (7) tissue differentiation, and (8) cell cycle. Signaling pathway analysis indicated that Wnt1/Ca(2+) signaling pathway was activated during head regeneration. Integrating the analyses of proteome expression profiling, functional annotation, and signaling pathway, amputation-induced head reformation requires some mechanisms to promote cell proliferation and differentiation, including differential regulation of proapoptotic and antiapoptotic proteins, and the regulation of proliferation and differentiation-related proteins. Importantly, Wnt1/Ca(2+) signaling pathway upregulates Rx expression, finally facilitating the differentiation of neoblasts into various cell types. Taken together, our study demonstrated that proteomic analysis approach used by us is a powerful tool in understanding molecular process related to head regeneration of planarian.

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Year:  2015        PMID: 25697422     DOI: 10.1007/s00427-015-0494-3

Source DB:  PubMed          Journal:  Dev Genes Evol        ISSN: 0949-944X            Impact factor:   0.900


  64 in total

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Authors:  Michael T Veeman; Jeffrey D Axelrod; Randall T Moon
Journal:  Dev Cell       Date:  2003-09       Impact factor: 12.270

2.  Morphological and functional recovery of the planarian photosensing system during head regeneration.

Authors:  Takeshi Inoue; Hiroshi Kumamoto; Keiji Okamoto; Yoshihiko Umesono; Masaki Sakai; Alejandro Sánchez Alvarado; Kiyokazu Agata
Journal:  Zoolog Sci       Date:  2004-03       Impact factor: 0.931

3.  smedinx-11 is a planarian stem cell gap junction gene required for regeneration and homeostasis.

Authors:  Néstor J Oviedo; Michael Levin
Journal:  Development       Date:  2007-08-01       Impact factor: 6.868

4.  Opposing roles of voltage-gated Ca2+ channels in neuronal control of regenerative patterning.

Authors:  Dan Zhang; John D Chan; Taisaku Nogi; Jonathan S Marchant
Journal:  J Neurosci       Date:  2011-11-02       Impact factor: 6.167

5.  A molecular wound response program associated with regeneration initiation in planarians.

Authors:  Danielle Wenemoser; Sylvain W Lapan; Alex W Wilkinson; George W Bell; Peter W Reddien
Journal:  Genes Dev       Date:  2012-05-01       Impact factor: 11.361

6.  Brain region specificity of 3-nitropropionic acid-induced vulnerability of neurons involves cytochrome c oxidase.

Authors:  Shilpee Singh; Magdalena Misiak; Cordian Beyer; Susanne Arnold
Journal:  Neurochem Int       Date:  2010-06-23       Impact factor: 3.921

7.  Xrx1, a novel Xenopus homeobox gene expressed during eye and pineal gland development.

Authors:  S Casarosa; M Andreazzoli; A Simeone; G Barsacchi
Journal:  Mech Dev       Date:  1997-01       Impact factor: 1.882

8.  Early planarian brain regeneration is independent of blastema polarity mediated by the Wnt/β-catenin pathway.

Authors:  Marta Iglesias; Maria Almuedo-Castillo; A Aziz Aboobaker; Emili Saló
Journal:  Dev Biol       Date:  2011-07-20       Impact factor: 3.582

9.  Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach.

Authors:  Jordi Solana; Damian Kao; Yuliana Mihaylova; Farah Jaber-Hijazi; Sunir Malla; Ray Wilson; Aziz Aboobaker
Journal:  Genome Biol       Date:  2012       Impact factor: 17.906

10.  SmedGD: the Schmidtea mediterranea genome database.

Authors:  Sofia M C Robb; Eric Ross; Alejandro Sánchez Alvarado
Journal:  Nucleic Acids Res       Date:  2007-09-18       Impact factor: 16.971

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  4 in total

1.  Bioelectric gene and reaction networks: computational modelling of genetic, biochemical and bioelectrical dynamics in pattern regulation.

Authors:  Alexis Pietak; Michael Levin
Journal:  J R Soc Interface       Date:  2017-09       Impact factor: 4.118

2.  iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians.

Authors:  Xiaofang Geng; Gaiping Wang; Yanli Qin; Xiayan Zang; Pengfei Li; Zhi Geng; Deming Xue; Zimei Dong; Kexue Ma; Guangwen Chen; Cunshuan Xu
Journal:  PLoS One       Date:  2015-07-01       Impact factor: 3.240

3.  Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea.

Authors:  Ta-Hsuan Ong; Elena V Romanova; Rachel H Roberts-Galbraith; Ning Yang; Tyler A Zimmerman; James J Collins; Ji Eun Lee; Neil L Kelleher; Phillip A Newmark; Jonathan V Sweedler
Journal:  J Biol Chem       Date:  2016-02-16       Impact factor: 5.157

4.  High throughput measurement of metabolism in planarians reveals activation of glycolysis during regeneration.

Authors:  Edie A Osuma; Daniel W Riggs; Andrew A Gibb; Bradford G Hill
Journal:  Regeneration (Oxf)       Date:  2018-01-11
  4 in total

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