| Literature DB >> 25695327 |
Naomi Hall, Linh Nguyen Thuy, Trinh Do Thi Diem, Allison Waters, Linda Dunford, Jeff Connell, Michael Carr, William Hall, Lan Anh Nguyen Thi.
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Year: 2015 PMID: 25695327 PMCID: PMC4344271 DOI: 10.3201/eid2103.141147
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
FigureMaximum-likelihood phylogenetic tree of hepatitis delta virus (HDV) genotypes 1 and 2 from Vietnam. A 472-nt fragment (corresponding to nucleotides 802–1,273 from HDV isolate C15; GenBank accession no. KF660600) was used to construct the phylogram. HDV genotyping was done by using amplification and bidirectional sequencing of the R0 region as described by Le Gal et al. (). Bootstrap resampling was done for 1,000 replicates of the dataset using the neighbor-joining algorithm; values >70% are shown at the nodes. Bold text indicates samples from patients in Vietnam; location, year, and risk group are indicated. Genbank accession numbers are shown in parentheses. Scale indicates substitutions per position. PWID, person who injects drugs; SW, sex worker.