Literature DB >> 25694229

pH responsiveness of fibrous assemblies of repeat-sequence amphipathic α-helix polypeptides.

Toshiaki Takei1, Kouhei Tsumoto, Atsuhito Okonogi, Akiko Kimura, Shuichi Kojima, Kazumori Yazaki, Tsunetomo Takei, Takuya Ueda, Kin-ichiro Miura.   

Abstract

We reported previously that our designed polypeptide α3 (21 residues), which has three repeats of a seven-amino-acid sequence (LETLAKA)3, forms not only an amphipathic α-helix structure but also long fibrous assemblies in aqueous solution. To address the relationship between the electrical states of the polypeptide and its α-helix and fibrous assembly formation, we characterized mutated polypeptides in which charged amino acid residues of α3 were replaced with Ser. We prepared the following polypeptides: 2Sα3 (LSTLAKA)3, in which all Glu residues were replaced with Ser residues; 6Sα3 (LETLASA)3, in which all Lys residues were replaced with Ser; and 2S6Sα3 (LSTLASA)3; in which all Glu and Lys residues were replaced with Ser. In 0.1M KCl, 2Sα3 formed an α-helix under basic conditions and 6Sα3 formed an α-helix under acid conditions. In 1M KCl, they both formed α-helices under a wide pH range. In addition, 2Sα3 and 6Sα3 formed fibrous assemblies under the same buffer conditions in which they formed α-helices. α-Helix and fibrous assembly formation by these polypeptides was reversible in a pH-dependent manner. In contrast, 2S6Sα3 formed an α-helix under basic conditions in 1M KCl. Taken together, these findings reveal that the charge states of the charged amino acid residues and the charge state of the Leu residue located at the terminus play an important role in α-helix formation.
© 2015 The Protein Society.

Entities:  

Keywords:  aggregation; amphipathic α-helix; fibrous assembly; pH responsiveness; self-assembly

Mesh:

Substances:

Year:  2015        PMID: 25694229      PMCID: PMC4420536          DOI: 10.1002/pro.2665

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  65 in total

1.  Salt effects on protein stability: two-stranded alpha-helical coiled-coils containing inter- or intrahelical ion pairs.

Authors:  W D Kohn; C M Kay; R S Hodges
Journal:  J Mol Biol       Date:  1997-04-11       Impact factor: 5.469

2.  Reversible assembly of helical filaments by de novo designed minimalist peptides.

Authors:  David W H Frost; Christopher M Yip; Avijit Chakrabartty
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

Review 3.  The structure of alpha-helical coiled coils.

Authors:  Andrei N Lupas; Markus Gruber
Journal:  Adv Protein Chem       Date:  2005

4.  Artificial peptide-nanospheres self-assembled from three-way junctions of beta-sheet-forming peptides.

Authors:  Kazunori Matsuura; Kazuya Murasato; Nobuo Kimizuka
Journal:  J Am Chem Soc       Date:  2005-07-27       Impact factor: 15.419

5.  Dynamic reassembly of peptide RADA16 nanofiber scaffold.

Authors:  Hidenori Yokoi; Takatoshi Kinoshita; Shuguang Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-06       Impact factor: 11.205

Review 6.  Building fibrous biomaterials from alpha-helical and collagen-like coiled-coil peptides.

Authors:  Derek N Woolfson
Journal:  Biopolymers       Date:  2010       Impact factor: 2.505

Review 7.  Coiled coils: new structures and new functions.

Authors:  A Lupas
Journal:  Trends Biochem Sci       Date:  1996-10       Impact factor: 13.807

8.  Water-soluble beta-sheet models which self-assemble into fibrillar structures.

Authors:  K Janek; J Behlke; J Zipper; H Fabian; Y Georgalis; M Beyermann; M Bienert; E Krause
Journal:  Biochemistry       Date:  1999-06-29       Impact factor: 3.162

9.  The crystal structure of a five-stranded coiled coil in COMP: a prototype ion channel?

Authors:  V N Malashkevich; R A Kammerer; V P Efimov; T Schulthess; J Engel
Journal:  Science       Date:  1996-11-01       Impact factor: 47.728

10.  Ion pairs significantly stabilize coiled-coils in the absence of electrolyte.

Authors:  Y Yu; O D Monera; R S Hodges; P L Privalov
Journal:  J Mol Biol       Date:  1996-01-26       Impact factor: 5.469

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