Anna Wilkinson1, Paul W Hill2, María V Vaieretti3, John F Farrar2, Davey L Jones2, Richard D Bardgett1. 1. Lancaster Environment Centre, Lancaster University Bailrigg, Lancaster, LA1 4YQ, U.K ; Faculty of Life Sciences, Michael Smith Building, The University of Manchester Oxford Road, Manchester, M13 9PT, U.K. 2. School of Environment, Natural Resources and Geography, College of Natural Sciences, Bangor University Gwynedd, LL57 2UW, U.K. 3. Instituto Multidisciplinario de Biología Vegetal (IMBIV) Casilla de Correo 495, 5000, Córdoba, Argentina.
Abstract
In monoculture, certain plant species are able to preferentially utilize different nitrogen (N) forms, both inorganic and organic, including amino acids and peptides, thus forming fundamental niches based on the chemical form of N. Results from field studies, however, are inconsistent: Some showing that coexisting plant species predominantly utilize inorganic N, while others reveal distinct interspecies preferences for different N forms. As a result, the extent to which hypothetical niches are realized in nature remains unclear. Here, we used in situ stable isotope tracer techniques to test the idea, in temperate grassland, that niche partitioning of N based on chemical form is related to plant productivity and the relative availability of organic and inorganic N. We also tested in situ whether grassland plants vary in their ability to compete for, and utilize peptides, which have recently been shown to act as an N source for plants in strongly N-limited ecosystems. We hypothesized that plants would preferentially use NO3 (-)-N and NH4 (+)-N over dissolved organic N in high-productivity grassland where inorganic N availability is high. On the other hand, in low-productivity grasslands, where the availability of dissolved inorganic N is low, and soil availability of dissolved organic N is greater, we predicted that plants would preferentially use N from amino acids and peptides, prior to microbial mineralization. Turves from two well-characterized grasslands of contrasting productivity and soil N availability were injected, in situ, with mixtures of (15)N-labeled inorganic N (NO3 (-) and NH4 (+)) and (13)C(15)N labeled amino acid (l-alanine) and peptide (l-tri-alanine). In order to measure rapid assimilation of these N forms by soil microbes and plants, the uptake of these substrates was traced within 2.5 hours into the shoots of the most abundant plant species, as well as roots and the soil microbial biomass. We found that, contrary to our hypothesis, the majority of plant species across both grasslands took up most N in the form of NH4 (+), suggesting that inorganic N is their predominant N source. However, we did find that organic N was a source of N which could be utilized by plant species at both sites, and in the low-productivity grassland, plants were able to capture some tri-alanine-N directly. Although our findings did not support the hypothesis that differences in the availability of inorganic and organic N facilitate resource partitioning in grassland, they do support the emerging view that peptides represent a significant, but until now neglected, component of the terrestrial N cycle.
In monoculture, certain plant species are able to preferentially utilize different nitrogen (N) forms, both inorganic and organic, including amino acids and peptides, thus forming fundamental niches based on the chemical form of N. Results from field studies, however, are inconsistent: Some showing that coexisting plant species predominantly utilize inorganic N, while others reveal distinct interspecies preferences for different N forms. As a result, the extent to which hypothetical niches are realized in nature remains unclear. Here, we used in situ stable isotope tracer techniques to test the idea, in temperate grassland, that niche partitioning of N based on chemical form is related to plant productivity and the relative availability of organic and inorganic N. We also tested in situ whether grassland plants vary in their ability to compete for, and utilize peptides, which have recently been shown to act as an N source for plants in strongly N-limited ecosystems. We hypothesized that plants would preferentially use NO3 (-)-N and NH4 (+)-N over dissolved organic N in high-productivity grassland where inorganic N availability is high. On the other hand, in low-productivity grasslands, where the availability of dissolved inorganic N is low, and soil availability of dissolved organic N is greater, we predicted that plants would preferentially use N from amino acids and peptides, prior to microbial mineralization. Turves from two well-characterized grasslands of contrasting productivity and soil N availability were injected, in situ, with mixtures of (15)N-labeled inorganic N (NO3 (-) and NH4 (+)) and (13)C(15)N labeled amino acid (l-alanine) and peptide (l-tri-alanine). In order to measure rapid assimilation of these N forms by soil microbes and plants, the uptake of these substrates was traced within 2.5 hours into the shoots of the most abundant plant species, as well as roots and the soil microbial biomass. We found that, contrary to our hypothesis, the majority of plant species across both grasslands took up most N in the form of NH4 (+), suggesting that inorganic N is their predominant N source. However, we did find that organic N was a source of N which could be utilized by plant species at both sites, and in the low-productivity grassland, plants were able to capture some tri-alanine-N directly. Although our findings did not support the hypothesis that differences in the availability of inorganic and organic N facilitate resource partitioning in grassland, they do support the emerging view that peptides represent a significant, but until now neglected, component of the terrestrial N cycle.
Recent observations of direct amino acid and peptide utilization by plants have challenged the traditional view of soil nitrogen (N) cycling, whereby plants depend entirely on inorganic nitrogen to meet their N demands (Näsholm et al. 1998; Komarova et al. 2008; Hill et al. 2011a,b; Soper et al. 2011). Evidence of intact plant uptake of organic N has been obtained mainly from N-limited ecosystems (e.g., Chapin et al. 1993; Näsholm et al. 1998; Nordin et al. 2001; Henry and Jefferies 2003; Hill et al. 2011a), where soil microbial activity and N mineralization rates are low, and annual plant requirements for N can be 2- to 6-fold greater than the annual inorganic N supply (Giblin et al. 1991; Fisk and Schmidt 1995; Kielland 2001). There is also evidence, however, that plants of more productive ecosystems, including agricultural plants, are able to take up organic N intact (e.g., Streeter et al. 2000; Bardgett et al. 2003; Harrison et al. 2007; Hill et al. 2011b), although inorganic N often appears to be the primary source of N for most plants in ecosystems where N is not limiting.The ability of plants to compete directly with soil microbes for N has been widely debated; until recently, it was assumed that plants use N that has been mineralized, and only when in excess of microbial demand (Runge 1971). However, Schimel and Bennett (2004) proposed that the form of the captured N depends on the N-limitation of the site. In very N-limited ecosystems, mineralization is minimal and plants and microbes compete for N at the organic monomer stage, with plants capturing amino acid-N as it diffuses from N-rich to N-poor soil microsites. As ecosystems become less N-limited, and mineralization of solid organic N increases, the dynamics of plant–microbial competition also shift, with plants capturing mineralized-NH4+ as it diffuses through the soil. Finally, in more fertile ecosystems, plants are thought to be poor competitors for organic N, and indeed have no need to compete with microbes, as NH4+ and NO3− are available in excess of microbial demand (Hodge et al. 1998, 1999; Owen and Jones 2001; Jones et al. 2004). However, evidence from both glasshouse (Näsholm et al. 2000; Weigelt et al. 2005) and field (Streeter et al. 2000; Bardgett et al. 2003; Harrison et al. 2007) experiments demonstrate that many grassland species, from both high-productivity grasslands, to extensive, low-productivity sites, are able to take up amino acids directly. As a result of this uncertainty, there remains a need to test how shifting dominance of dissolved N forms influences plant–microbial competition across grasslands of varying productivity and land management intensity.It has been proposed that in situations where organic N use by plant species is common, there is potential for niche partitioning between species based on the chemical form of N to facilitate species coexistence and maintain plant diversity (McKane et al. 2002). There is evidence from a number of studies to support this theory, including results of laboratory studies showing that plant species from strongly N-limited alpine ecosystems differ in their ability to utilize different chemical forms of N, which points to plant species having fundamental niches based on N form in these situations (Miller and Bowman 2002, 2003). Also, in arctic tundra, dominant plant species were found to utilize the most available N forms in situ (i.e., glycine and ammonium), whereas subordinate species mainly used nitrate (McKane et al. 2002). Moreover, in the maritime Antarctic, where peptidic-N is a large component of the soil N pool, Antarctic Hairgrass (Deschampia Antarctica Desv.) was found to have higher shoot recovery of small-chain peptide-15N over inorganic15N following 15N-labeled substrate addition, unlike its competitor, the moss Sanoinia uncinata (Hedw.) Loeske, which had higher recovery of NH4+–15N in its shoot material (Hill et al. 2011a). Interspecies differences in N uptake patterns have also been found in grassland species in monoculture, suggesting that they too have fundamental niches based on chemical N form (Weigelt et al. 2005; Harrison et al. 2008). However, it is unclear whether such niches are realized in nature, given that coexisting grassland plants have been shown to principally utilize inorganic N over amino acid-N over longtime periods (2–33 days) (Harrison et al. 2007). However, a variety of fast- and slow-growing grassland plant species have been shown to be differentiated in their uptake of inorganic and organic N in pot experiments (Weigelt et al. 2005; Harrison et al. 2008), and coexisting grassland plant species have been found in situ to have complementary N-use strategies based on spatial, temporal, and chemical (NO3− vs. NH4+) pools (Kahmen et al. 2006). Therefore, further direct comparisons of organic N (including peptide) uptake and partitioning between species in situ are required to assess the extent of niche differentiation, if any, between grasslands of varying productivities and N availability.Here, we tested whether the capacity of grassland plant communities to: (1) capture and (2) partition the soil N pool based on chemical form is related to the shifting dominance of N forms, which is driven primarily by the rate of dissolved organic N turnover by the microbial community. This was done using in situ dual-labeling (15N13C) of turves within two grasslands of contrasting productivity and N availability located along a well-characterized grassland productivity gradient in North Wales, United Kingdom (Fig.1, Table1; Farrell et al. 2011a). We used 15N–NH4+ and 15N–NO3−, as well as dual labeled (15N13C) amino acids and peptides; the uptake of the latter has not previously been recorded in temperate grasslands, despite dissolved organic N pools in grasslands typically comprising of more peptidic-N than free amino acid-N (Farrell et al. 2011a,b). Specifically, we tested the following hypotheses: (1) Plant species will be more likely to compete directly with microbes for organic N forms, including peptide, in the low-productivity grassland where dissolved ON concentrations are higher and plant available N is more limited (i.e., lower concentrations of NO3− and NH4+); and (2) this will lead to a greater degree of niche partitioning, or utilization of a broader range of chemical N forms by different plant species, than that of the high-productivity grassland plant community. As a secondary objective, we aimed to establish, for the first time in temperate grasslands, the extent to which a range of coexisting plant species of contrasting productivity are able to short circuit the traditional N cycle by directly utilizing peptidic-N in situ.
Figure 1
A typical turf harvested following 15N-labeled IN and 15N13C-labeled ON addition, from (A) the high-productivity grassland and (B) the low-productivity grassland.
Table 1
Characteristics of the 2 grassland sites (adapted from Farrell et al. 2011a,b)
High-productivity grassland
Low-productivity grassland
Location (WGS84 Lat/Lon)
53°14′11.25″N, 004°01′08.23″W
53°13′29.48″N, 004°01′50.08″W
Altitude (m)
15
320
Above-ground net primary productivity (g DW m−2 day−1)
5.39 ± 0.36*
0.92 ± 0.34*
Above-ground C (g C m−2)
95.2 ± 4.7
65.1 ± 4.9
Above-ground N (g N m−2)
6.60 ± 0.66*
2.24 ± 0.17*
Plant diversity (Shannon-H)
0.64 ± 0.09*
2.22 ± 0.05*
Soil moisture content (%)
29.1 ± 1.0*
44.3 ± 2.4*
Soil organic matter (%)
7.8 ± 0.5*
22.3 ± 2.0*
Bulk density (g cm−3)
1.09 ± 0.01*
0.45 ± 0.08*
pH
6.92 ± 0.28*
4.76 ± 0.04*
Electrical conductivity (μS cm−1)
103 ± 27
36 ± 4
Total soil N (g N m−2)
562 ± 55
646 ± 104
DON (mg N m−2)
169 ± 58
301 ± 74
NH4+–N (mg N m−2)
132 ± 26
73.4 ± 36.8
NO3−–N (mg N m−2)
401 ± 50*
0.6 ± 0.5*
Free amino acid-N (mg N m−2)
0.54 ± 0.18
0.28 ± 0.11
Peptide-N (mg N m−2)
1.74 ± 0.27
1.71 ± 0.64
Significant differences (P < 0.05) between sites are indicated by an asterisk. Soil data are presented on a dry mass basis by area to a depth of 15 cm.
A typical turf harvested following 15N-labeled IN and 15N13C-labeled ON addition, from (A) the high-productivity grassland and (B) the low-productivity grassland.Characteristics of the 2 grassland sites (adapted from Farrell et al. 2011a,b)Significant differences (P < 0.05) between sites are indicated by an asterisk. Soil data are presented on a dry mass basis by area to a depth of 15 cm.
Materials and Methods
Site description
Stable isotope labeling was carried out in situ at two contrasting sites situated along a well-characterized grassland productivity gradient at Abergwyngregyn, Gwynedd, Wales, UK (53°14 11.25 N, 004°01 08.23 W, and 53°13 29.48 N, 004°01 50.08 W, respectively) (Farrell et al. 2011a). The first site (site 1 of Farrell et al. 2011a; hereafter referred to as “high-productivity grassland”) was a highly productive (i.e., high aboveground biomass productivity), inorganic N-(in particular NO3−) rich Eutric Cambisol soil (DIN:DON = 3.15), that had received regular applications of inorganic fertilizer (120 kg N ha−1 year−1), and was dominated by the grass Poa trivialis L. and white clover (Trifolium repens L.) (Fig.1A). The second site (site 3 of Farrell et al. 2011a; hereafter referred to as “low-productivity grassland”) was an unfertilized, lower productivity, but more species-rich, Agrostis-Festuca upland grassland on an organic matter-rich Cambic Podzol (Fig.1B), with a dissolved N pool rich in organic N (DIN:DON = 0.25; based on the findings of Farrell et al. 2011a). Further site details are given in Table1, and in Farrell et al. (2011a).
Experimental design and sampling
At each grassland site, 5 replicate blocks, each containing 5, 20 × 20 cm turves, were marked out approximately 2 weeks prior to the labeling event over an area of c. 0.25 ha. In June 2011, randomly allocated solutions containing a range of N forms were injected into the root zone of each turf simultaneously at each site. These solutions contained a mixture of four N forms: potassium nitrate (KNO3), ammonium sulfate ((NH4)2SO4), the amino acid alanine, and the peptidetri-alanine. We chose alanine as the amino acid monomer as it occurs commonly as free amino acids and short peptides in both grassland sites (Farrell et al. 2011a), and it has been found to be taken up by plant roots in both sterile conditions (Hill et al. 2011b) and in situ by an Antarctic grass (Hill et al. 2011a).The solutions were made up of equal concentrations of the individual N forms (1.4 mg N turf−1, 100 μmol N turf−1) in 50 mL double-distilled water and were injected into the soil (0–8 cm depth) evenly across the turf in 10 × 5 mL injections. The amount of N added to the turves needed to be sufficient enough to allow for detection of 15N and 13C within the plant and microbial biomass; however, we are aware that this may have produced enrichment and dilution effect for the certain N forms at the two sites (total N added equivalent to 35 mg N m−2, and 8.8 mg N m−2 per N form added). All turves received the same mixture of N forms, but within each block, individual turves were allocated randomly assigned treatments in which only one of each of the four N forms was isotopically labeled with 15N (25 μmol 15N turf−1) and 13C for the amino acid (alanine, U–13C3, 97–99%; 15N, 97–99%) and peptide (tri-alanine, U–13C3, 97–99%; 15N, 97–99%; CK Gas Products, Hook, UK). This allowed us to test the ability of plant and microbes to utilize N from the labeled substrates, and it also enabled us to test for direct uptake of the amino acid and peptide by plants, as indicated by plant tissue enrichment of both 13C and 15N (Näsholm et al. 1998). A fifth set of turves within each block were injected with distilled H2O as a natural abundance control.Within each turf, solutions (50 mL) were injected into the top 8 cm of soil in 10 consecutive injections across a grid template using the side-port needle technique described by Streeter et al. (2000). Previous field studies have used chase periods spanning days or even weeks (e.g., Bardgett et al. 2003; Harrison et al. 2007). However, when comparing inorganic and organic N uptake, short-term labeling is a more effective way of assessing plant–microbe competition events, as the residence time of organic N within soil is of the order of a minutes due to rapid microbial uptake, whereas forms of N less desirable to soil microbes, such as nitrate, are often taken up much more slowly (Jones et al. 2005b; Hill et al. 2012; Wilkinson et al. 2014). Therefore, we destructively harvested turves to a depth of 10 cm after a much shorter time period (2.5 h). This provides sufficient time to harvest turves once labeled_N has been injected, yet reduces the plant uptake of inorganic-15N following microbial mineralization and turnover of organic-15N. The bulk of inorganic-15N is likely released during a slow secondary mineralization phase, given that half times for organic N mineralization in these two grasslands range from 6–14 h (Wilkinson et al. 2014). A number of subsamples of shoot material (approximately 1–3 g total dwt) of coexisting species that were consistently present in each quadrat (site 1: Poa trivialis L. and Trifolium repens L.; site 2: Agrostis capillaris L., Anthoxanthum odoratum L., Festuca ovina L., Luzula sp. and Potentilla erecta (L.) Raeusch.) were taken across each turf, and subsamples of the same species were bulked together to give one sample of each species present for 13C/15N analysis. Furthermore, three subsamples of root and soil material were taken from across each turf using a 1-cm-diameter hand corer, and these were also bulked together to produce a soil sample and a root sample from each turf for 13C/15N analysis. Finally, the remaining turf was cutout of the ground to a depth of 8 cm. Soil for 13C/15N analysis was passed through a 3-mm sieve, and the chloroform fumigation-extraction procedure (Vance et al. 1987) was immediately carried out in the laboratory, at the nearby Henfaes field station (Bangor University) in order to determine uptake of 15N and 13C by the soil microbial biomass. K2SO4 extractions were carried out on fumigated and non-fumigated soil, and these were freeze-dried and a subsample was analyzed for C and N and 13C and 15N content at the NERC Life Sciences Mass Spectrometer Facility, Centre for Ecology and Hydrology, Lancaster (precision for working standards better than 0.46 ‰ (13C) and 6.92 ‰ (15N)). Samples (1 mg) were combusted in a Carlo Erba elemental analyzer, and the resultant CO2/N2 from combustion and reduction analyzed for δ13C/15N using an isotope ratio mass spectrometer (IRMS; Dennis Leigh Technologies).Plant shoot and root material for 13C/15N analysis were immediately frozen following the harvest and transported from the study sites to the laboratory at Lancaster. Here, roots were washed in 0.5 mol/L CaCl2 solution to remove any of the isotope label attached externally, and plant material was dried for 48 h at 70°C before being weighed, ground and analyzed for C and N and 13C and 15N content at the NERC Life Sciences Mass Spectrometer Facility, as described above.The remaining intact turves were separated completely into the shoots of the most abundant species at each site, roots and soil. These components were also dried for 48 h at 70°C and weighed to obtain a measure of total turf and turf component biomass.
Data analysis
Values of δ13C/15N were converted into atom % values using the equations:
where R is the ratio of 13C to 12C and RPDB is the natural abundance standard for C or N.Atom % excess values were calculated by subtracting control atom % values from treatment atom % values:For 15N enrichment calculations, control treatments consisted of the plots injected with dH2O. For 13C calculations, control treatments consisted of plots injected with dH2O, and inorganic (NO3− and NH4+) N treatments. Due to high levels of variation in natural abundance levels of 13C, exacerbated by the very large C pool size relative to injected quantities of C, the lowest natural abundance atom % value was used in equation 3 to avoid negative values of 13C enrichment.Atom % excess values in the plant and microbial biomass were converted into total sample concentration values (nmol 15N/13C excess g−1 plant/microbial biomass) using the following equations:We used analysis of variance (ANOVA) followed by post hoc Tukey tests to assess for differences between sites in the recovery of 15N and 13C from the added N forms within microbial biomass and plant material. We also performed ANOVA's to determine which of the N forms were recovered in the greatest amounts in both the microbial biomass and in the plant tissue, as well to assess plant and microbial competition for the different N forms. All analyses were carried out on recovered 15N/13C data (as a percentage of the total amount of isotope added), with site (high- vs. low-productivity grassland), turf fraction (microbial biomass vs. root/shoot biomass), N form (NO3−, NH4+, alanine, and tri-alanine) and block included in the analysis as factors. Where necessary, data were transformed in order to meet the assumptions of normality and homogeneity of variance. Where significant differences in the recovery of 15N or 13C occurred between sites, or between microbial biomass and plant material, we also performed ANOVA's on tissue isotope concentrations (nmol 15N/13C excess g-1 DW) in order to assess whether differences between sites or between microbial biomass and plant material were driven by biomass differences between sites or between plant material and microbial biomass.To assess the partitioning of N forms between different plant species, we carried out ANOVA's followed by Tukey tests on data from each site separately. Within each site, analyses were carried out on 13C and 15N concentration data (nmol 13C/15N excess g−1 DW) for the shoot material of each species, with N form (NO3−, NH4+, alanine, and tri-alanine) and block included in the analysis as factors. Again, where data did not meet the assumptions of normality and homogeneity of variances, analyses were performed on transformed data.Regression analyses were performed to identify linear relationships between concentrations (nmol excess g−1 DW) of 13C and 15N in microbial biomass, roots and the shoot material of each species at both sites. All analyses were performed using IBM SPSS Statistics (Version 20.0. Armonk, NY: IBM Corp).
Results
Differences in total recovery of substrate in plant and microbial biomass between grasslands
In both grasslands, we only recovered a small percentage of the 15N and 13C that was originally added after 2.5 h, and this ranged from 0.4–26.1% and 0–9.1% of added 15N, and 0.36–5.3% and 0.25–18.4% of added 13C in the high- and low-productivity grasslands respectively (Fig.2). There were significant differences between grasslands in the recovery of 15N from all substrates (Fig.1A–D; F(1,169) = 33.86, P < 0.001), with a higher percentage of 15N recovered in plant and microbial biomass in the higher productivity grassland. For example, microbes took up significantly more alanine-15N (F(1,3) = 118.20, P = 0.002) and tri-alanine-15N (F(1,4) = 103.02, P = 0.001), and marginally more NO3-15N (F(1,3) = 10.537, P = 0.048) in the high-productivity grassland compared to the low-productivity grassland. Within the microbial biomass, organic-15N was recovered in higher quantities in the high-productivity grassland, regardless of biomass differences between sites (Fig S1A,B), with concentrations of microbial 15N (15N excess g−1 soil DW) being 1.8x greater in the high-productivity grassland following alanine addition (F(1,3) = 13.88, P = 0.034), and 4x greater following tri-alanine addition (F(1,4) = 72.45, P = 0.001; Fig. S2A).
Figure 2
The total percentage of added isotope recovered from within the total microbial, root and shoot biomass, following the 15N-labeled application of (A) NO3−, (B) NH4+, (C) alanine, and (D) tri-alanine, and the 13C-labeled application of (E) alanine, and (F) tri-alanine, in the high-productivity (black bars) and low-productivity (gray bars) grasslands.
The total percentage of added isotope recovered from within the total microbial, root and shoot biomass, following the 15N-labeled application of (A) NO3−, (B) NH4+, (C) alanine, and (D) tri-alanine, and the 13C-labeled application of (E) alanine, and (F) tri-alanine, in the high-productivity (black bars) and low-productivity (gray bars) grasslands.There were no significant differences between grasslands in the recovery of 15N within shoot material following any of the labeled substrate additions. However, significantly more 15N was recovered in the root material from the high-productivity grassland compared to the low-productivity grassland following the addition of all labeled substrates (Fig.2A–D; 15N–NO3: F(1,4) = 22.36, P = 0.009, 15N–NH4: F(1,3) = 19.93, P = 0.021, 15N13C-alanine: F(1,3) = 42.57, P = 0.007, and 15N13C-tri-alanine: F(1,4) = 50.36, P = 0.002). These differences between grasslands were also significant when differences in root biomass between sites were taken into account: Root biomass was much greater in the low-productivity grassland (Fig. S1C), yet concentrations of 15N (15N excess g−1 DW) within root biomass in the high-productivity grassland were between 8–15 times greater than in the low-productivity grassland (Fig. S2B; P < 0.011).There were also some differences between grasslands in 13C recovery within plant material following the addition of labeled organic N forms (Fig.2E and F), although this did not follow any discernible pattern. For example, significantly more 13C was recovered in shoot material following labeled alanine addition (F(1,4) = 13.71, P = 0.021) in the high-productivity grassland compared to the low-productivity grassland. However, significantly less 13C was recovered in the root material following labeled tri-alanine addition in the high-productivity grassland (F(1,4) = 41.40, P = 0.003). These differences are probably related to differences in root and shoot biomass between sites as no significant differences were observed in root and shoot tissue concentrations of 13C between grasslands.
Contrasting patterns of recovery of inorganic and organic N within plant and microbial biomass
In both grasslands, more 15N was recovered in the microbial biomass following labeled alanine addition (Fig.3A; high-productivity grassland: F(3,10) = 13.17, P = 0.001, low-productivity grassland: F(3,12) = 7.72, P = 0.004), when compared to other forms of N addition (although this was not significantly greater than 15N–NH4 in the low-productivity grassland). Likewise, 13C recovery within the microbial biomass was greater following alanine addition than with tri-alanine addition in both grasslands (Fig.3B; high-productivity grassland: F(1,3) = 15.31, P = 0.03, low-productivity grassland: F(1,4) = 33.51, P = 0.004). Within root material, more 15N was recovered in the 15N–NH4 treatment in the high-productivity grassland (Fig.3C; F(3,12) = 10.21, P = 0.001), although this was not significantly greater than the amount recovered under the labeled alanine treatment. Recovery of 15N within shoot material was higher following 15N–NH4 addition in both grasslands (Fig.3D), although this was only significantly greater than the recovery of 15N from tri-alanine in the high-productivity grassland (F(3,12) = 13.03, P > 0.001) and the recovery of 15N from NO3− and tri-alanine in the low-productivity grassland (F(3,12) = 13.51, P > 0.001). No differences in root recovery of 15N were observed between treatments in the low-productivity grassland, nor were any significant differences observed in either grassland between the recovery of 13C following labeled amino acid and peptide addition in all plant material.
Figure 3
The total percentage of added (A) 15N recovered from within microbial biomass, (B) 13C recovered from within microbial biomass, (C) 15N recovered from within root material, and (D) 15N recovered from within shoot material, following the 15N-labeled application of NO3− (black bars), NH4+ (pale gray bars), alanine (dark gray bars), and tri-alanine (white bars) in the high-productivity and low-productivity grasslands.
The total percentage of added (A) 15N recovered from within microbial biomass, (B) 13C recovered from within microbial biomass, (C) 15N recovered from within root material, and (D) 15N recovered from within shoot material, following the 15N-labeled application of NO3− (black bars), NH4+ (pale gray bars), alanine (dark gray bars), and tri-alanine (white bars) in the high-productivity and low-productivity grasslands.
Plant and microbial competition for different N forms
Generally, there were very few differences between the amount of 15N and 13C recovered in plant and microbial biomass (Fig.4), although there were some exceptions. In the high-productivity grassland, three times more 15N was recovered in the microbial biomass compared to plant biomass following organic N addition (Fig.4C; alanine: F(1,3) = 23.15, P = 0.017, and Fig.4D; tri-alanine: F(1,4) = 38.30, P = 0.003). In the low-productivity grassland, slightly more 15N was recovered in plant biomass compared to microbial biomass following labeled NH4+ addition (Fig.4B; F(1,4) = 10.22, P = 0.033), and seventeen times more 13C was recovered in plant biomass (Fig.4F; F(1,4) = 51.85, P = 0.002) following labeled tri-alanine addition. Nonetheless, in most cases, equal amounts of 13C and 15N from added substrates were recovered in plant material and microbial biomass in both grasslands. However, plant material always had a much higher concentration of 15N and 13C (nmol excess g−1) than microbial biomass in all substrate addition treatments (Fig. S3).
Figure 4
The total percentage of added 15N recovered from within the microbial biomass (black bars), root material (pale gray bars), and shoot material (dark gray bars), following the 15N-labeled application (A) NO3−, (B) NH4+, (C) alanine, and (D) tri-alanine, and 13C following the 13C-labeled application (E) alanine and (F) tri-alanine.
The total percentage of added 15N recovered from within the microbial biomass (black bars), root material (pale gray bars), and shoot material (dark gray bars), following the 15N-labeled application (A) NO3−, (B) NH4+, (C) alanine, and (D) tri-alanine, and 13C following the 13C-labeled application (E) alanine and (F) tri-alanine.In the high-productivity grassland, recovery data from within plant material indicate that added 15N was largely retained in root material (between 1.4–7.5% of added N), with significantly smaller amounts (between 0.5% and 1.3%) recovered in shoot biomass following the addition of labeled NO3− (F(2,7) = 9.67, P = 0.01), NH4+ (F(2,8) = 5.46, P = 0.032), alanine (F(2,7) = 32.15, P < 0.001) and tri-alanine (F(2,8) = 95.70, P < 0.001). However, in the low-productivity grassland, 15N was recovered in equal amounts from root and shoot material, with the exception of alanine addition, where again most 15N was retained in the root material (F(2,7)=39.86, P < 0.001). Furthermore, most 13C was retained in the root material (Fig.4E; alanine: F(2,7) = 7.30, P = 0.019, tri-alanine: F(2,8) = 44.22, P < 0.001) in the low-productivity grassland, whereas there were no differences in the recovery of 13C between root and shoot material in the high-productivity grassland.
Plant species-specific differences in substrate 15N and 13C concentrations
We found no clear evidence for resource partitioning between coexisting species in either the high- or the low-productivity grassland. In both grasslands, the highest shoot 15N concentrations for most species were found following the addition of NH4–15N, although in most cases, this was not significantly different to either NO3–15N or alanine–15N (Fig.5). Furthermore, in the low-productivity grassland, no significant differences were observed between 15N shoot concentrations of either A. odoratum or P. erecta following any of the labeled substrate additions.
Figure 5
Concentrations of 15N in the shoot material of species in the high-productivity grassland (T. repens and P. trivialis) and the low-productivity grassland (A. capillaris, A. odoratum, F. ovina, Luzula sp., and P. erecta), following the application of isotopically labeled 15N–NO3− (black bars), 15N–NH4+ (pale gray bars), and 13C15N-alanine (dark gray bars) or 13C15N-tri-alanine (white bars).
Concentrations of 15N in the shoot material of species in the high-productivity grassland (T. repens and P. trivialis) and the low-productivity grassland (A. capillaris, A. odoratum, F. ovina, Luzula sp., and P. erecta), following the application of isotopically labeled 15N–NO3− (black bars), 15N–NH4+ (pale gray bars), and 13C15N-alanine (dark gray bars) or 13C15N-tri-alanine (white bars).In both grasslands, we found no significant differences in 13C enrichment of shoots of coexisting plant species between alanine and tri-alanine treatments, with the exception of Luzula sp. in the low-productivity grassland, in which 340% more alanine-13C (540 nmol 13C g−1 DW increase) was measured in shoot tissue than tri-alanine-13C (F(1,3) = 18.13, P = 0.024).
Evidence of direct plant uptake of ON
We detected significant, but weak, relationships between the excess concentrations of tri-alanine-13C and 15N in both root material (R2 = 0.824, P = 0.033) and the shoot material of Luzula sp. (R2 = 0.795, P = 0.042) in the low-productivity grassland (Fig. S4). In the high-productivity grassland, however, we only found a significant regression between the isotope concentrations in the microbial biomass following labeled alanine addition (R2 = 0.955, P = 0.023), and not in plant material.
Discussion
Our findings illustrate that plants in grasslands are able to acquire N from both inorganic and organic sources (including peptides); however, regardless of grassland productivity and availability of dissolved inorganic and organic N in soil, most plant N was taken up as inorganic N, and particularly NH4 + . This supports the traditional role of plants predominately using inorganic N and refutes our hypothesis that patterns of plant N uptake change with shifts in the availability of dissolved inorganic and organic N, thus allowing plant species to coexist through using distinct pools of dissolved N. However, the simultaneous uptake of tri-alanine-13C by all plant species tested, coupled with significant positive relationships between tri-alanine-13C and 15N concentrations in root material and Luzula shoots in the low-productivity grassland, suggests that a proportion of peptide-N was taken up intact by the plant communities within both grasslands (Näsholm et al. 1998, 2000; Nordin et al. 2001). Thus, we were able to show, for the first time in both low- and high-productivity temperate grassland, that plants are able to assimilate N from peptides in situ.Our data do not support the notion that plant utilization of dissolved organic N is more prevalent as inorganic N becomes less available within the soil-dissolved fraction. On the one hand, uptake of inorganic N by plant roots was greater in the high-productivity grassland, which suggests that plants of these grasslands are adapted to utilizing the most abundant forms of N. But on the other hand, more NH4+ was taken up by plants compared to NO3−, which was the most abundant N form in the high-productivity soil. In addition, we found that uptake of organic N in the form of amino acids and peptides by plant roots was greater in the more productive grassland, even when differences in root biomass between sites were considered. This highlights the fact that soil solution concentrations of N forms may be poor indicators of their flux into plants or soil microbes.Harrison et al. (2007) showed that coexisting plant species of semi-natural, low-productivity grassland utilize a range of N forms, but all take up larger quantities of inorganic N over organic N, and simple amino acids over more complex amino acids. We also found that most plants from both high- and low-productivity grasslands had higher shoot concentrations of 15N in the 15NH4+ treatment (with the exception of Potentilla erecta). In most cases, these 15N concentrations were not significantly different to those in the NO3− or alanine treatments, which were also relatively high. We examined how differences in the isotope dilution within soil N pools affect plant uptake of 15N by scaling 15N excess values recorded within shoot tissue of coexisting species based on the size of the target N pool within each grassland. We found that 50–500x more 15N–NH4 was recovered in shoot material than dissolved ON forms across all species, although these calculations do not consider the flux of dissolved ON through the soil pool, which can be extremely rapid (e.g., Farrell et al. 2011b; Hill et al. 2012; Wilkinson et al. 2014). This indicates that, even when pool dilution is considered, coexisting plant species in high- and low-productivity grasslands principally utilize N from inorganic sources over organic N forms, regardless of soil-dissolved IN/ON concentrations.Schimel and Bennett (2004) proposed that in strongly N-limited environments where dissolved organic N dominates the soil profile, plants are able to capture organic N as it diffuses through the soil. As N availability increases, more organic N is mineralized and plants and microbes actively compete for NH4+. Although soil concentrations of NO3− were much higher in the high- than low-productivity grassland (Table1), we found no significant differences in concentrations of soil NH4–N or total soil N. However, NO3–N occurs in high concentrations in the high-productivity grassland (over 3x the amount of NH4+–N, and 240–750 × more than dissolved ON forms; Table1; Farrell et al. 2011a,b). When pool dilution is considered, nitrate uptake in the shoot material of the two species in this grassland ranges between 10–46 μmol 15N excess g−1, which is much greater than that of the dissolved ON forms, which range from 11.5–81.8 nmol 15N excess g−1. Nevertheless, recovery of 15N from NH4 is still 20% higher than that from NO3 in T. repens, although in P. trivialis, recovery of 15N from NH4 is 28% lower than from NO3. When pool dilution is considered, therefore, our data still show that coexisting species take up more inorganic N than organic N, however, in the low-productivity, inorganic N-rich grassland, niche differentiation between species may potentially occur based on inorganic N form. However, this would need to be confirmed by further experimentation that considers inorganic N fluxes alongside pool dilution.It is also important to note that enrichment of shoot material is not necessarily indicative of total plant uptake of different compounds. Translocation of N from roots to shoots can occur at different rates depending on chemical form; inorganic N can be translocated to shoot material faster than organic N in grassland plants, despite the equally high amounts of the different N forms sequestered in the root material (Weigelt et al. 2005). Consequently, it is possible that N enrichment in the shoot material in our study may under- or over-estimate the preferences of certain species for more complex organic N forms. As we did not measure root-N concentrations at the species level, it is not possible to say whether certain species were retaining larger concentrations of organic N belowground.Plant utilization of amino acids and peptide-N occurred across both grassland types. In both grasslands, plants were very strong competitors with microbes for all forms of N. It may be that at both sites, organic N, and in particular alanine, was rapidly mineralized and plants were taking up high levels of 15N as mineralized NH4 + . This could be occurring more in the high-productivity grassland, where more organic-15N was recovered in plant roots compared to the low-productivity grassland, but less organic-13C. Our data show that while plants and microbes utilize N from both inorganic and organic sources, more organic N, and particularly alanine-N, was recovered from within microbial biomass, while more NH4–N was recovered from within plant material, when compared to other forms of N. Previous laboratory studies using soil from both the high- and low-productivity grasslands have demonstrated that amino acids and peptides are removed from soil solution by microbes in a matter of minutes and that the C is mineralized rapidly (substrates have halftimes of between 5–7 minutes for alanine and 6–9 minutes for tri-alanine, with faster uptake and mineralization rates occurring in the higher productivity soil; Wilkinson et al. 2014). This suggests that much of the added organic N would probably become unavailable for plant uptake very quickly and that rapid mineralization of the substrates could account for a significant proportion of organic15N recovered in the plant material in both grasslands.Values of δ13C obtained from plant and microbial biomass samples fluctuated greatly. However, within both grasslands, plant material was enriched in 13C, which implies that plants were, to some degree, taking in alanine and tri-alanine intact. In particular, a high percentage of 13C from tri-alanine was recovered in plant root material in the low-productivity site, and this was significantly greater than that recovered from within the microbial biomass. Coupled with significant, but weak regressions between isotopes measured in root and shoot material of Luzula sp., this indicates a proportion of tri-alanine was probably taken up intact by plants. We accept that using colocation of 13C and 15N to infer direct uptake is not unequivocal (Näsholm and Persson 2001; Jones et al. 2005a; von Felten et al. 2008; Rasmussen et al. 2010). We therefore remain cautious in drawing conclusions around the amount of organic N taken up directly by Luzula sp., or by the roots of the other plant species in the low-productivity grassland. However, it is clear from the partitioning of alanine and tri-alanine C between microbial uptake and mineralization in these soils that not all of the 13C recovered in plants can be accounted for by microbially mineralized 13C (Wilkinson et al. 2014). Further chemical analysis of plant tissue might be useful in providing absolute confirmation of direct peptide uptake (Bol et al. 2002; von Felten et al. 2008; Harrison et al. 2008), although the amounts of added labelled material were kept as near to field concentrations as possible and therefore precise detection within tissue would probably not be feasible.A possible mechanism for potential direct peptide uptake by plant species in the low-productivity grassland would be greater interception of organic N as it diffuses from areas of high to low concentration by mycorrhizal fungi (Schimel and Bennett 2004). Moreover, it is possible that some root enrichment values could be attributed to enrichment within microbial symbionts inside the root tissue itself (e.g., arbuscular mycorrhizal fungi). However, the relatively subordinate Luzula sp is not noted for being heavily colonized by arbuscular mycorrhizal fungi (Read and Haselwandter 1981; Rose 1989; Grime et al. 2007). An alternative explanation for direct uptake of tri-alanine by Luzula, therefore, might be the existence increased peptide transporters within the root system, or the ability to rapidly colonize hot spots of organic N activity within grasslands. These ideas, however, require further testing.
Conclusions
Our data show that plants in both high- and low-productivity grasslands generally take up larger quantities of inorganic over organic N, thereby providing no support for the idea that plant uptake of inorganic/organic N in temperate grasslands shifts based on the dominant form of dissolved N in soil, as proposed by Schimel and Bennett (2004). Furthermore, we found no clear evidence for resource partitioning of N between coexisting plant species in either high- or low-productivity grasslands. However, plants in both grasslands were found to take up considerable amounts of 15N and 13C from organic sources, and for the first time, we provide evidence that some direct uptake of organic N in its peptide form by plants occurs in grasslands. We propose that although grassland plant species across gradients of productivity and inorganic N/dissolved organic N availability have the ability to rapidly utilize N from amino acids and peptides, they predominantly utilize inorganic N when available. However, as N availability was still quite high in both grasslands, a more pronounced N availability gradient may unveil shifts in plant organic N uptake and partitioning between species with dissolved organic N availability.
Authors: Robert B McKane; Loretta C Johnson; Gaius R Shaver; Knute J Nadelhoffer; Edward B Rastetter; Brian Fry; Anne E Giblin; Knut Kielland; Bonnie L Kwiatkowski; James A Laundre; Georgia Murray Journal: Nature Date: 2002-01-03 Impact factor: 49.962
Authors: Paul W Hill; Richard S Quilliam; Thomas H DeLuca; John Farrar; Mark Farrell; Paula Roberts; Kevin K Newsham; David W Hopkins; Richard D Bardgett; David L Jones Journal: PLoS One Date: 2011-04-26 Impact factor: 3.240