Literature DB >> 25690332

Spatiotemporal expression of Prdm genes during Xenopus development.

Rieko Eguchi1, Emi Yoshigai, Takamasa Koga, Satoru Kuhara, Kosuke Tashiro.   

Abstract

Epigenetic regulation is known to be important in embryonic development, cell differentiation and regulation of cancer cells. Molecular mechanisms of epigenetic modification have DNA methylation and histone tail modification such as acetylation, phosphorylation and ubiquitination. Until now, many kinds of enzymes that modify histone tail with various functional groups have been reported and regulate the epigenetic state of genes. Among them, Prdm genes were identified as histone methyltransferase. Prdm genes are characterized by an N-terminal PR/SET domain and C-terminal some zinc finger domains and therefore they are considered to have both DNA-binding ability and methylation activity. Among vertebrate, fifteen members are estimated to belong to Prdm genes family. Even though Prdm genes are thought to play important roles for cell fate determination and cell differentiation, there is an incomplete understanding of their expression and functions in early development. Here, we report that Prdm genes exhibit dynamic expression pattern in Xenopus embryogenesis. By whole mount in situ hybridization analysis, we show that Prdm genes are expressed in spatially localized manners in embryo and all of Prdm genes are expressed in neural cells in developing central nervous systems. Our study suggests that Prdm genes may be new candidates to function in neural cell differentiation.

Entities:  

Year:  2015        PMID: 25690332      PMCID: PMC4474993          DOI: 10.1007/s10616-015-9846-0

Source DB:  PubMed          Journal:  Cytotechnology        ISSN: 0920-9069            Impact factor:   2.058


  36 in total

1.  Wholemount in situ hybridization to Xenopus embryos.

Authors:  C M Jones; J C Smith
Journal:  Methods Mol Biol       Date:  1999

2.  hamlet, a binary genetic switch between single- and multiple- dendrite neuron morphology.

Authors:  Adrian W Moore; Lily Yeh Jan; Yuh Nung Jan
Journal:  Science       Date:  2002-08-23       Impact factor: 47.728

3.  The Polycomb Ezh2 methyltransferase regulates muscle gene expression and skeletal muscle differentiation.

Authors:  Giuseppina Caretti; Monica Di Padova; Bruce Micales; Gary E Lyons; Vittorio Sartorelli
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

4.  PRDM6 is enriched in vascular precursors during development and inhibits endothelial cell proliferation, survival, and differentiation.

Authors:  Yaxu Wu; James E Ferguson; Hong Wang; Rusty Kelley; Rongqin Ren; Holly McDonough; James Meeker; Peter C Charles; Hengbin Wang; Cam Patterson
Journal:  J Mol Cell Cardiol       Date:  2007-06-30       Impact factor: 5.000

5.  Expression of the mouse PR domain protein Prdm8 in the developing central nervous system.

Authors:  Tae Komai; Hiroko Iwanari; Yasuhiro Mochizuki; Takao Hamakubo; Yoichi Shinkai
Journal:  Gene Expr Patterns       Date:  2009-07-16       Impact factor: 1.224

Review 6.  SET domain proteins modulate chromatin domains in eu- and heterochromatin.

Authors:  T Jenuwein; G Laible; R Dorn; G Reuter
Journal:  Cell Mol Life Sci       Date:  1998-01       Impact factor: 9.261

7.  Evi1 is specifically expressed in the distal tubule and duct of the Xenopus pronephros and plays a role in its formation.

Authors:  Claude Van Campenhout; Massimo Nichane; Aline Antoniou; Hélène Pendeville; Odile J Bronchain; Jean-Christophe Marine; Andre Mazabraud; Marianne L Voz; Eric J Bellefroid
Journal:  Dev Biol       Date:  2006-03-30       Impact factor: 3.582

8.  A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity.

Authors:  Na-Yu Chia; Yun-Shen Chan; Bo Feng; Xinyi Lu; Yuriy L Orlov; Dimitri Moreau; Pankaj Kumar; Lin Yang; Jianming Jiang; Mei-Sheng Lau; Mikael Huss; Boon-Seng Soh; Petra Kraus; Pin Li; Thomas Lufkin; Bing Lim; Neil D Clarke; Frederic Bard; Huck-Hui Ng
Journal:  Nature       Date:  2010-10-17       Impact factor: 49.962

9.  Prdm13 mediates the balance of inhibitory and excitatory neurons in somatosensory circuits.

Authors:  Joshua C Chang; David M Meredith; Paul R Mayer; Mark D Borromeo; Helen C Lai; Yi-Hung Ou; Jane E Johnson
Journal:  Dev Cell       Date:  2013-04-29       Impact factor: 12.270

10.  PRDM11 is dispensable for the maintenance and function of hematopoietic stem and progenitor cells.

Authors:  Lina A Thoren; Cathrine K Fog; Klaus T Jensen; Natalija Buza-Vidas; Christophe Côme; Anders H Lund; Bo T Porse
Journal:  Stem Cell Res       Date:  2013-08-09       Impact factor: 2.020

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  3 in total

1.  Prdm12 regulates inhibitory neuron differentiation in mouse embryonal carcinoma cells.

Authors:  Akira Baba; Takuya Suwada; Shigeru Muta; Satoru Kuhara; Kosuke Tashiro
Journal:  Cytotechnology       Date:  2022-02-02       Impact factor: 2.058

Review 2.  Emerging Roles of PRDM Factors in Stem Cells and Neuronal System: Cofactor Dependent Regulation of PRDM3/16 and FOG1/2 (Novel PRDM Factors).

Authors:  Paweł Leszczyński; Magdalena Śmiech; Emil Parvanov; Chisato Watanabe; Ken-Ichi Mizutani; Hiroaki Taniguchi
Journal:  Cells       Date:  2020-12-04       Impact factor: 6.600

3.  Mutations in SIX1 Associated with Branchio-oto-Renal Syndrome (BOR) Differentially Affect Otic Expression of Putative Target Genes.

Authors:  Tanya Mehdizadeh; Himani D Majumdar; Sarah Ahsan; Andre L P Tavares; Sally A Moody
Journal:  J Dev Biol       Date:  2021-06-30
  3 in total

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