Małgorzata Kowczyk-Sadowy1, Renata Świsłocka2, Hanna Lewandowska3, Jolanta Piekut4, Włodzimierz Lewandowski5. 1. Division of Chemistry, Bialystok University of Technology, Wiejska 45E, Bialystok 15-351, Poland. m.kowczyk@pb.edu.pl. 2. Division of Chemistry, Bialystok University of Technology, Wiejska 45E, Bialystok 15-351, Poland. r.swislocka@pb.edu.pl. 3. Institute of Nuclear Chemistry and Technology, 16 Dorodna St., Warsaw 03-195, Poland. h.lewandowska@ichtj.waw.pl. 4. Division of Chemistry, Bialystok University of Technology, Wiejska 45E, Bialystok 15-351, Poland. j.piekut@pb.edu.pl. 5. Division of Chemistry, Bialystok University of Technology, Wiejska 45E, Bialystok 15-351, Poland. w-lewando@wp.pl.
Abstract
This work is a continuation of research on a correlation between the molecular structure and electronic charge distribution of phenolic compounds and their biological activity. The influence of lithium, sodium, potassium, rubidium and cesium cations on the electronic system of trans o-coumaric (2-hydroxy-cinnamic) acid was studied. We investigated the relationship between the molecular structure of the tested compounds and their antimicrobial activity. Complementary molecular spectroscopic techniques such as infrared (FT-IR), Raman (FT-Raman), ultraviolet-visible (UV-VIS) and nuclear magnetic resonance (1H- and 13C-NMR) were applied. Structures of the molecules were optimized and their structural characteristics were calculated by the density functional theory (DFT) using the B3LYP method with 6-311++G** as a basis set. Geometric and magnetic aromaticity indices, atomic charges, dipole moments and energies were also calculated. Theoretical parameters were compared to the experimental characteristics of investigated compounds. Correlations between certain vibrational bands and some metal parameters, such as electronegativity, ionization energy, atomic and ionic radius, were found. The microbial activity of studied compounds was tested against Escherichia coli, Bacillus subtilis, Pseudomonas aeruginosa, Staphylococcus aureus, Proteus vulgaris and Candida albicans.
This work is a continuation of research on a correlation between the molecular structure and electronic charge distribution of phenolic compounds and their biological activity. The influence of lithium, sodium, potassium, rubidium and cesiumcations on the electronic system of trans o-coumaric (2-hydroxy-cinnamic) acid was studied. We investigated the relationship between the molecular structure of the tested compounds and their antimicrobial activity. Complementary molecular spectroscopic techniques such as infrared (FT-IR), Raman (FT-Raman), ultraviolet-visible (UV-VIS) and nuclear magnetic resonance (1H- and 13C-NMR) were applied. Structures of the molecules were optimized and their structural characteristics were calculated by the density functional theory (DFT) using the B3LYP method with 6-311++G** as a basis set. Geometric and magnetic aromaticity indices, atomic charges, dipole moments and energies were also calculated. Theoretical parameters were compared to the experimental characteristics of investigated compounds. Correlations between certain vibrational bands and some metal parameters, such as electronegativity, ionization energy, atomic and ionic radius, were found. The microbial activity of studied compounds was tested against Escherichia coli, Bacillus subtilis, Pseudomonas aeruginosa, Staphylococcus aureus, Proteus vulgaris and Candida albicans.
Phenolic acids (PAs) have varied biological activity in the human body. They help to scavenge free radicals, chelate metal ions, induce changes in enzyme activity and protein availability. It was also confirmed that PAs prevent coronary heart disease, cancer, inflammation and diabetes. Hydroxycinnamic acid and its derivatives (e.g., coumaric, caffeic, ferulic and sinapic acids) are important pharmaceuticals for high blood pressure, stroke prevention and possess antitumor activity [1,2,3].There are three isomers of coumaric acid, i.e. o-, m- and p-coumaric acid, that differ in the position of the hydroxyl group substitution on the phenyl group. In Nature the most widespread is the para-isomer [4]. Coumaric acidscan be found in cereals (barley, rye, corn, oats, rice, wheat), fruits (berries, grapes, apples, currants), legumes (beans, peas), nuts (hazelnut, pecan, peanut, walnut), vegetables (celery, tomato, garlic, carotene), oilseeds (flax, mustard), red wine, beer and tea [3,5,6].Phenolic acids are responsible for the sour and bitter taste of some food products of plant origin. It was found that the characteristic flavor of products made from flour obtained from maize embryos is the result of the presence of certain PAs, namely: ferulic and o-and p-coumaric acids [7]. Coumaric acid shows lower antioxidant activity than ferulic acid. This is related to the presence of only one hydroxyl group in coumaric acid. In order to increase the antioxidant activity compared to the low-density lipoprotein (LDL) fraction it should be subjected to esterification with tartaric acid. Several papers report on the antioxidative properties of coumaric acids [8,9]. Moreover, cinnamic acid and its derivatives: p-coumaric, ferulic and sinapic acid, are important copolymer building blocks of lignin [10].Cinnamic acid is a precursor for lignin biosynthesis, being transformed into 4-coumaric acid (4-hydroxycinnamic acid), ferulic acid (4-hydroxy-3-methoxycinnamic acid), and sinapic acid (4-hydroxy-3,5-dimethoxycinnamic acid) before its incorporation into a lignin polymer.Pannala et al. [11] showed that hydroxycinnamatescan interact with peroxynitrite depending on the nature of the ring substitutions and the positions of the hydroxyl groups. Studies on the potency of PAs to inhibit tyrosine nitration by peroxynitrite demonstrated that PAs’ activity decreases in the order: caffeic acid→chlorogenic acid→ferulic acid→p-coumaric acid→o-coumaric acid→m-coumaric acid. p-Coumaric acid inhibits LDL peroxidation, is shown to be antimutagenic, antigenotoxic, and antimicrobial, inhibits cellular melanogenesis, plays a role in immune regulation in humans and reduces the risk of stomach cancer [8]. This acid is an instance of the PAs commonly used as additives in chemical, food, health, cosmetic and pharmaceutical industries.In our earlier works, the influence of various metals and halogens on the electronic structure of the benzoic, salicylic, nicotinic and isonicotinic acids were studied [12,13,14,15]. Those ligands were treated as models to study enzymes and other biologically important molecules. We studied the relationship between certain parameters (i.e., ionic potential, electronegativity, atomic mass of the metal or ring substituent) and electronic charge distribution in the whole molecule. In case of those ligands the decrease in the ionic potential of the metal brings about the decrease in the uniform charge distribution in the aromatic ring. In the case of halogens, the ionic potential was even more important than the polarity of the C-X bond. The question arises then if the same or other parameters influence the electronic charge distribution in the case of alkalimetal o-coumarates.The second aim of this work is to continue earlier research [16,17,18,19] on a correlation between the molecular structure and electronic charge distribution of phenolic compounds and their biological activity. In one of our papers [20] the influence of lithium, sodium, potassium, rubidium and cesium on the electronic system of the p-coumaric (4-hydroxycinnamic) acid was investigated. Experimental and theoretical FT-IR, FT-Raman, 1H- and 13C-NMR spectra of p-coumaric acid and its salts were registered and analyzed.In the present paper another isomer trans o-coumaric acid and its pan class="Chemical">lithium, sodium, potassium, rubidium and cesium complexes were synthesized and studied by spectroscopic methods (FT-IR, FT-Raman, UV-VIS, 1H- and 13C-NMR). A logical series of metals was selected, (different radius but the same degree of oxidation). The alkalimetals taken to this study meet the following criteria (which are important from the point of view of further possible applications): (1) possibility of practical application because of the good solubility of the alkalimetal compounds in water and polar solvents; (2) as small as possible harmfulness to the human body and the natural environment; (3) availability, stability and ease of preparation.
UV-VIS spectroscopy was applied to study/establish the changes in π→π* transition energies and draw conclusions on delocalization energy changes. The antimicrobial activity of the studied compounds was tested against Escherichia coli, Pseudomonas aeruginosa, Staphylococcus aureus, Proteus vulgaris, Bacillus subtilis and, Candida albicans, which allowed us to draw some correlations between physicochemical parameters and microbial properties of trans o-coumaric acid and alkalimetal o-coumarates. Elementary analysis for all synthesized complexes was performed in order to confirm the chemical composition of the tested compounds. The theoretically predicted values were compared with the experimentally measured data and the results were also discussed. Optimized geometrical structures, atomic charges, infrared and NMR spectra of trans o-coumaric acid and Li, Na and K trans o-coumarates were calculated by the B3LYP/6-311++G** method.
2. Results and Discussion
2.1. Calculated Geometrical Structure
Optimized geometrical structures were calculated using B3LYP/6-311++G** quantum chemical method [21]. The distances between atoms in trans o-coumaric acid and alkalimetal o-coumarate molecules and the angles between bonds were calculated and the values are presented in Table 1. The atom numbering is shown in Figure 1. Changes in the bond distances and angles between bonds suggest that alkalimetalcations influence the molecular structure of trans o-coumaric acid. The bond lengths of C1-C9, C7-C8, C7-O1 and C7-O2 do not change in the series of salts, although they are different from the corresponding values calculated for the 2-hydroxycinnamic acid molecule. Large differences between bonds are also noticed for C7-O2 (it increases by: 0.065 Å (Li); 0.056 Å (Na); 0.058 Å (K)). A slightly lower extension of the C7-C8 bond between carbon atoms of the carboxylic acid and C1-C9 is observed. The bond lengths of C7-O1 in the acid is higher than in the salts (0.006–0.014 Å). The values of the bond lengths in aromatic ring are almost the same in acid and salts.
Table 1
Distances between atoms (Å), bonds angles (°) and geometric aromaticity indices calculated for trans o-coumaric acid and lithium, sodium and potassium o-coumarates.
Acid
Li
Na
K
Calculated
Experimental [22]
Calculated
Distances [Å]
C1-C2 a
1.412
1.401
1.411
1.412
1.411
C2-C3
1.396
1.389
1.396
1.397
1.396
C3-C4
1.389
1.368
1.390
1.391
1.391
C4-C5
1.396
1.379
1.396
1.397
1.395
C5-C6
1.387
1.379
1.388
1.389
1.389
C6-C1
1.406
1.394
1.405
1.407
1.405
C1-C9
1.460
1.466
1.464
1.466
1.466
C7-C8
1.471
1.460
1.481
1.343
1.497
C8-C9
1.344
1.337
1.343
1.501
1.341
C2-O3
1.365
1.353
1.368
1.369
1.370
C7-O1
1.364
1.329
1.278
1.270
1.272
C7-O2
1.211
1.229
1.276
1.266
1.268
O3-H2
0.963
0.790
0.963
0.965
0.962
C3-H3
1.086
0.904
1.086
1.086
1.087
C4-H4
1.084
0.989
1.084
1.084
1.084
C5-H5
1.083
0.917
1.083
1.083
1.084
C6-H6
1.083
1.082
1.083
1.083
1.083
C8-H7
1.083
1.059
1.084
1.085
1.085
C9-H8
1.085
0.613
1.084
1.084
1.084
O1-H1(M)
0.968
0.987
1.854
2.372
2.516
O2-Me
-
-
1.850
2.365
2.509
Angles [°]
C1-C2-C3
120.867
120.590
121.014
121.063
121.145
C2-C3-C4
120.181
119.880
120.253
120.152
120.338
C3-C4-C5
120.066
120.410
119.881
119.962
119.699
C4-C5-C6
119.522
120.310
119.565
119.578
119.609
C5-C6-C1
121.962
120.590
122.110
122.015
122.262
C6-C1-C2
117.402
118.210
117.177
117.230
116.947
C2-C1-C9
119.370
118.660
119.606
119.585
119.781
C1-C9-C8
126.973
126.160
126.882
127.421
126.824
C7-C8-C9
120.355
120.130
121.977
122.953
122.615
C8-C7-O1
111.123
112.460
118.273
116.528
116.496
C8-C7-O2
126.998
126.060
121.069
119.740
119.511
C7-C8-H7
116.222
116.610
114.692
114.930
114.494
C9-C8-H7
123.423
123.250
123.332
122.117
122.891
C8-C9-H8
116.851
117.230
116.776
116.648
116.691
C1-C9-H8
116.176
86.400
116.342
115.931
116.486
C9-C1-C2
119.370
118.660
119.606
119.585
119.781
C1-C2-O3
119.370
116.780
117.705
117.807
117.759
C3-C2-O3
119.370
122.620
121.281
121.130
121.096
C3-C4-H4
119.370
118.660
119.661
119.595
119.736
C4-C5-H5
119.370
125.840
120.326
120.338
120.331
C6-C5-H5
119.370
113.680
120.109
120.085
120.060
C5-C6-H6
119.370
118.640
119.100
119.048
119.119
C1-C6-H6
119.370
120.600
118.790
118.937
118.619
C6-C1-C9
119.370
123.130
123.217
123.185
123.272
C9-C8-C7
120.355
120.130
121.977
122.953
122.615
C5-C4-H4
120.344
120.930
120.458
120.443
120.566
C2-O3-H2
110.021
114.110
109.702
109.812
109.442
C7-O1-H1(M)
106.701
110.930
82.753
89.771
91.302
O1-C7-O2
121.879
121.480
120.657
123.732
123.994
C7-O2-M
-
-
82.988
90.165
91.693
O1-M-O2
-
-
73.601
56.332
53.011
C1-C9-C8-C7
−179.998
−179.210
179.998
−179.999
179.998
C6-C1-C9-C8
0.011
7.290
−0.023
−0.030
−0.023
C9-C8-C7-O1
−179.999
176.670
179.999
179.994
179.999
C9-C8-C7-O2
0.002
−2.790
0.004
−0.004
0.004
a: Atom numbering.
Figure 1
Structures of: trans o-coumaric acid (a) and alkali metal o-coumarates (M = Li, Na, K, Rb, Cs) (b).
Distances between atoms (Å), bonds angles (°) and geometric aromaticity indices calculated for trans o-coumaric acid and lithium, sodium and potassium o-coumarates.a: Atom numbering.Structures of: trans o-coumaric acid (a) and alkalimetal o-coumarates (M = Li, Na, K, Rb, Cs) (b).In the case of angles, the increase in the order: acid < Li < Na < K was observed for C1-C2-C3 angles in the aromatic ring. The highest changes were noticed for the carboxylate group, as the C7-O1-H1(M) angle decreases by 23.948° (Li); 16.930° (Na); 15.399° (K). C8-C7-O1 angle increases by 7.150° (Li); 5.405° (Na); 5.372° (K), while the C8-C7-O2 angle decreases by 5.928° (Li); 7.257° (Na); 7.487° (K). In the aromatic ring only small angle changes were observed.Dipole moments, energies and geometric aromaticity indices [23,24] for trans o-coumaric acid and o-coumarates were calculated and are presented in Table 2. Comparing values of dipole moment for molecules of lithium, sodium andpotassium salts of 2-hydroxycinnamic acid an increasing tendency can be seen along the series: Li (1.909 D) < H (5.046 D) < Na (5.488 D) < K (6.155 D). The energy values decrease in the series: H→Li→K→Na. The obtained results show that the degree of ionic bonding increases from H to K atom, because of an increase in symmetrization of the carboxylate ion and in the aromaticity of the molecule.
Table 2
The calculated aromaticity indices, dipole moments (Debye) and total energy (Hartree, 1 hartree = 2625.5 kJ/mol) calculated using B3LYP/6-311++G** method for trans o-coumaric acid and o-coumarates lithium, sodium and potassium.
Acid
Li
Na
K
Geometric Aromaticity Indices
Aj
0.991
0.992
0.992
0.993
BAC
0.900
0.910
0.906
0.915
HOMA
0.955
0.958
0.952
0.960
GEO
0.020
0.017
0.018
0.016
EN
0.025
0.025
0.030
0.025
I6
92.652
93.182
93.023
93.482
Dipole Moment
Debye (D)
5.046
1.909
5.488
6.155
Energy
Hartree
−573.632
−580.615
−735.372
−1173.020
Aj—normalized function of the bond variance lengths; BAC—Bond Alternation Coefficient; HOMA—Harmonic Oscillator Model of Aromaticity; (GEO: bond length alternation; EN: bond elongation) I6—Bird’s index were calculated.
The calculated aromaticity indices, dipole moments (Debye) and total energy (Hartree, 1 hartree = 2625.5 kJ/mol) calculated using B3LYP/6-311++G** method for trans o-coumaric acid and o-coumarateslithium, sodium andpotassium.Aj—normalized function of the bond variance lengths; BAC—Bond Alternation Coefficient; HOMA—Harmonic Oscillator Model of Aromaticity; (GEO: bond length alternation; EN: bond elongation) I6—Bird’s index were calculated.Geometric aromaticity indices: Aj—normalized function of the bond variance lengths; BAC—Bond Alternation Coefficient pan class="Chemical">HOMA—Harmonic Oscillator Model of Aromaticity; and I6—Bird’s index were calculated. These index values calculated for salts are almost the same as those obtained for o-coumaric acid. Comparing the aromaticity indices for trans o-coumaric acid with those for p-coumaric acid (HOMA = 0.963; Aj = 0.992; BAC = 0.887; I6 = 93.134) [20] and cinnamic acid (HOMA = 0.968; Aj = 0.995; BAC = 0.915; I6 = 94.430) [25] show that the aromaticity of these compounds increases in the series: trans o-coumaric acid→p-coumaric acid→cinnamic acid (except BAC).
Mulliken, APT (atomic polar tensor) and NBO (natural bond orbital) atomic charges on the atoms of 2-hydroxycinnamic acid molecule and its alkalimetalsalts are gathered in Table 3. The electron density increases around atoms C1 and C8 and at the same time decreases around atoms C2, C4, C6 and C9 in the following order: K o-coumarate > Na o-coumarate > Li o-coumarate > trans o-coumaric acid, according to APT and NBO calculations.
Table 3
The atomic charges for trans o-coumaric acid as well as for lithium, sodium and potassium o-coumarates calculated in the B3LYP/6-311++G6** level.
Atom Position
Trans o-Coumaric Acid
Li o-Coumarate
Na o-Coumarate
K o-Coumarate
Mulliken
APT
NBO
Mulliken
APT
NBO
Mulliken
APT
NBO
Mulliken
APT
NBO
C1 a
1.790
−0.230
−0.141
1.920
−0.146
−0.131
1.855
−0.074
−0.123
1.855
−0.058
−0.121
C2
0.148
0.513
0.353
0.007
0.481
0.345
−0.110
0.454
0.340
−0.099
0.450
0.338
C3
−0.358
−0.115
−0.208
−0.296
−0.101
−0.282
−0.249
−0.088
−0.282
−0.272
−0.087
−0.283
C4
−0.278
0.055
−0.165
−0.257
0.026
−0.175
−0.271
0.002
−0.183
−0.254
−0.002
−0.185
C5
−0.610
−0.212
−0.228
−0.673
−0.187
−0.230
−0.597
−0.166
−0.231
−0.602
−0.162
−0.231
C6
−1.334
0.072
−0.144
−1.307
0.046
−0.150
−1.350
0.024
−0.155
−1.352
0.019
−0.156
C7
0.043
1.575
0.761
−0.446
1.498
0.735
0.218
1.418
0.738
0.295
1.448
0.743
C8
−0.239
−0.542
−0.307
0.530
−0.449
−0.275
−0.162
−0.336
−0.262
−0.495
−0.338
−0.260
C9
−0.036
0.370
−0.100
−0.010
0.248
−0.130
0.059
0.134
−0.157
−0.039
0.116
−0.160
H1 (Me)
0.292
0.307
0.481
0.151
0.843
0.886
0.557
0.884
0.918
0.997
0.957
0.939
H2
0.265
0.294
0.472
0.260
0.286
0.469
0.257
0.280
0.467
0.256
0.279
0.466
H3
0.126
0.028
0.203
0.116
0.022
0.200
0.117
0.019
0.197
0.115
0.017
0.197
H4
0.163
0.041
0.208
0.161
0.036
0.205
0.152
0.032
0.203
0.151
0.031
0.203
H5
0.182
0.037
0.209
0.177
0.032
0.207
0.171
0.028
0.204
0.170
0.027
0.204
H6
0.083
0.049
0.205
0.085
0.049
0.205
0.079
0.049
0.205
0.077
0.048
0.205
H7
0.209
0.051
0.208
0.186
0.037
0.200
0.171
0.023
0.192
0.173
0.024
0.192
H8
0.245
0.086
0.238
0.264
0.086
0.237
0.253
0.084
0.235
0.252
0.085
0.235
O1
−0.185
−0.856
−0.691
−0.334
−1.121
−0.817
−0.463
−1.098
−0.813
−0.502
−1.141
−0.822
O2
−0.310
−0.871
−0.611
−0.339
−1.036
−0.827
−0.490
−1.019
−0.820
−0.527
−1.064
−0.830
O3
−0.195
−0.649
−0.67
−0.193
−0.649
−0.672
−0.198
−0.649
−0.674
−0.199
−0.648
−0.674
Sum: Ring
−0.642
0.083
−0.605
−0.606
0.119
−0.623
−0.722
0.152
−0.634
−0.724
0.160
−0.638
C=C
−0.275
−0.172
−0.407
0.520
−0.201
−0.405
−0.103
−0.202
−0.419
−0.534
−0.222
−0.420
COO−
−0.452
−0.152
−0.541
−1.119
−0.659
−0.909
−0.735
−0.699
−0.895
−0.734
−0.757
−0.909
a: Atom numbering.
The atomic charges for trans o-coumaric acid as well as for lithium, sodium and potassium o-coumaratescalculated in the B3LYP/6-311++G6** level.a: Atom numbering.The highest changes of total charge independently on the method used were observed on carboxylate anion (Figure 2).The theoretical wavenumbers of IR, Raman and chemical shifts in NMR spectra were obtained and compared with experimental spectra.
Figure 2
The changes in Mulliken, APT and NBO total charges on carboxylate group in alkali metal o-coumarate molecules in comparison with trans o-coumaric acid.
The changes in Mulliken, APT and NBO total charges on carboxylate group in alkalimetal o-coumarate molecules in comparison with trans o-coumaric acid.
2.2. NMR Spectra
Experimental and calculated (B3LYP/6-311++G**) data for the chemical shifts in 1H- and 13C-NMR spectra obtained for trans o-coumaric acid and o-coumarates are gathered in Table 4. The numbering of atoms is shown in Figure 1. The experimental 1H-, 13C- and DEPT NMR spectra are shown in Figure 3, Figure 4 and Figure 5. Only experimental data were obtained for rubidium and cesium o-coumarates. A good correlation between experimental and calculated chemical shifts is obtained. Values of correlation coefficient R for carbon (13C-NMR) are in the range of 0.9742 to 0.9918. For proton (1H-NMR) the corresponding range is 0.9456–0.9695.
Table 4
Experimental and calculated (B3LYP/6-311++G**) chemical shifts [ppm] in 1H- and 13C-NMR spectra of DMSO solution of trans o-coumaric acid and o-coumarates.
Atoms
transo-Coumaric acid
Li o-Coumarate
Na o-Coumarate
K o-Coumarate
Rb o-Coumarate
Cs o-Coumarate
Exp.
Theoret.
Exp.
Theoret.
Exp.
Theoret.
Exp.
Theoret.
Exp.
Exp.
H1
12.20
6.03
-
-
-
-
-
-
-
-
H2
10.17
4.94
-
4.77
-
4.77
-
4.68
-
-
H3
6.90
7.00
6.93
6.98
6.91
6.97
6.95
6.98
6.96
6.95
H4
7.21
7.58
7.06
7.47
7.05
7.43
7.02
7.45
7.01
6.99
H5
6.82
7.20
6.71
7.15
6.71
7.13
6.67
7.12
6.65
6.60
H6
7.56
8.01
7.39
8.09
7.36
8.06
7.33
8.05
7.32
7.29
H7
6.51
6.76
6.50
6.74
6.49
6.73
6.54
6.74
6.53
6.55
H8
7.82
8.82
7.62
8.59
7.51
8.32
7.49
8.39
7.48
7.45
C1
120.97
126.79
127.16
128.21
127.39
129.24
127.28
129.28
127.38
127.45
C2
156.64
165.17
156.6
163.87
156.59
163.38
157.04
163.24
157.42
157.56
C3
118.30
121.59
118.56
121.28
118.42
121.34
117.83
121.13
117.71
117.58
C4
131.47
141.22
129.30
138.69
128.96
137.51
128.58
137.35
128.67
128.45
C5
119.45
127.09
123.07
126.68
123.25
126.96
123.41
126.74
123.46
123.57
C6
128.72
134.14
127.22
133.25
127.81
132.76
128.17
132.58
128.37
128. 49
C7
168.13
175.50
172.18
191.67
171.99
184.30
171.24
185.76
171.31
171.19
C8
116.18
117.72
116.31
127.45
116.28
130.99
116.37
132.13
116.49
116.52
C9
139.65
150.54
133.48
143.54
132.75
140.77
132.51
140.22
132.61
132.48
Figure 3
Experimental 13C-NMR spectrum of trans o-coumaric acid.
Figure 4
Experimental 1H-NMR spectrum of trans o-coumaric acid.
Figure 5
Experimental DEPT NMR spectrum of trans o-coumaric acid.
In the proton spectra of o-coumarates the signals from almost all protons are shifted downfield in comparison to appropriate signals in the spectrum of trans o-coumaric acid (except H3 and H7). This tendency suggests that introduction of metalcations causes the decrease in ring current intensity. Moreover the general tendency can be observed in the decrease of chemical shifts of particular protons in the series: Li→Na→K→Rb→Cs.This order depicts the increase in the destabilization of the electronic system. In the carbon spectra of o-coumarates there is almost no regularity in the chemical shifts of carbons along the series of alkalimetal o-coumarates. Only the values of chemical shifts of C5 and C6 atoms regularly increase in the series: acid→Li→Na→K→Rb→Cs.Chemical shift values of signals for trans o-coumaric acid were compared with those for p-coumaric acid [20] and cinnamic acid [25], and presented in Figure 6. The signals from protons No. 2, 8 and carbon No. 2 are shifted downfield in comparison to the appropriate signals in the spectrum of trans o-coumaric acid, whereas the signals from proton No. 4 and carbons No. 1 and 9 are shifted upfield. The values of chemical shifts of H1, H6, H7, H8, C6, C7, C8 and C9 were found almost the same.
Figure 6
Experimental 1H- (a) and 13C-NMR (a) chemical shifts of trans o-coumaric acid, p-coumaric acid and cinnamic acid.
Experimental and calculated (B3LYP/6-311++G**) chemical shifts [ppm] in 1H- and 13C-NMR spectra of DMSO solution of trans o-coumaric acid and o-coumarates.Experimental 13C-NMR spectrum of trans o-coumaric acid.Experimental 1H-NMR spectrum of trans o-coumaric acid.Experimental DEPT NMR spectrum of trans o-coumaric acid.Experimental 1H- (a) and 13C-NMR (a) chemical shifts of trans o-coumaric acid, p-coumaric acid and cinnamic acid.The relationship between calculated atomic charges spectra and experimental chemical shifts from the carbon for trans o-coumaric acid and o-coumarates was found and can be seen in Figure 7. Namely, the increase of the atomic charge along with the increase of the chemical shift is observed. The highest correlation coefficients R were obtained for the linear correlation between the chemical shifts and the NBO (for acid: 0.9542; for Li salt: 0.9866; for Na salt: 0.9829; for K salt: 0.9806) and APT (for acid: 0.9458; for Li salt: 0.9527; for Na salt: 0.9555; for K salt: 0.9477) atomic charges. Whereas the lower ones were obtained for the Mulliken atomic charges (for acid: 0.0583; for Li salt: 0.1311; for Na salt: 0.1284; for K salt: 0.1934).
Figure 7
The correlation between the calculated atomic charges on carbon atoms in trans o-coumaric acid and (a) and Na o-coumarate (b) molecules and experimental 13C-NMR chemical shifts.
The correlation between the calculated atomic charges on carbon atoms in trans o-coumaric acid and (a) and Na o-coumarate (b) molecules and experimental 13C-NMR chemical shifts.
2.3. Vibrational Spectra
The IR spectra of trans o-coumaric acid and lithium, sodium, potassium, rubidium and cesium o-coumarates are presented in Figure 8. The wavenumbers, intensities and assignments of bands occurring in the FT-IR and FT-Raman spectra of trans o-coumaric acid and the synthesized lithium, sodium, potassium, rubidium and cesium o-coumarates are presented in Table 5 and Table 6. Theoretical wavenumbers of the bands in vibrational spectra and also band intensities were obtained using B3LYP/6-311++G** method. The numeration of the normal vibrations of benzene ring was done according to the notation used by Varsányi [26]. A good correlation between experimental and theoretical wavenumbers in the IR spectra of trans o-coumaric acid as well as its salts were obtained; the correlation coefficients R for acid equal 0.9972; the corresponding value for lithium salt is 0.9976; for sodium salt −0.9975 and for potassium salt 0.9973.
Figure 8
The IR spectra of trans o-coumaric acid and lithium, sodium, potassium, rubidium and cesium o-coumarates.
Table 5
The wavenumbers (cm−1) and assignments of bands occurring in the experimental FT-IR, FT-Raman and calculated spectra of trans o-coumaric acid.
FT-IR
FT-Raman
Assignment
No [26]
Exp.
Theoret.
Int.
Exp.
3356
s a
3837
85.64
ν b(OH)ar
3771
108.64
ν(OH)
3200
13.48
ν(CH)ar, ν(CH)C=C
3195
0.84
ν(CH)ar
2
3080
m
3185
9.85
3061
vw
ν(CH)ar, ν(CH)C=C
20a
3055
m
3183
2.73
3045
vw
ν(CH)ar, ν(CH)C=C
20b
2972
m
3175
2.59
ν(CH)ar, ν(CH)C=C
7b
3152
12.85
ν(CH)ar
2847–2616
m
ν(OH)
1668
s
1781
372.28
1665
vw
ν(C=O)
1616
vs.
1673
302.05
1627
m
ν(CC)C=C
1599
vs.
1621
8.71
1604
vs
ν(CC)ar
8b
1557
m
1644
94.51
ν(CC)ar
8a
1497
m
1488
66.5
1509
w
ν(CC)ar
19b
1460
s
1529
11.43
ν(CC)ar
19a
1427
s
1377
193.31
1446
w
β(OH), β(CH)ar
1337
s
1326
31.15
1333
vw
β(CH)C=C, β(CH)ar
3
1327
s
1359
35.02
β(CH)C=C, β(CH)ar
14
1267
s
1351
28.97
1266
w
β(CH)C=C
1279
11.61
β(OH)
1219
vs
1274
62.45
1225
s
ν(C-OH)ar
1225
13.72
βCH
1186
s
1191
73.89
β(CH)ar
9a
1169
s
1131
639.08
1170
w
ν(C-OH)
1150
sh
1108
49.47
1151
w
β(CH)ar
1094
m
1184
6.15
1097
vw
β(CH)ar
18b
1040
w
1065
5.58
1039
w
β(CH)ar
18a
m
1037
28.63
996
vw
γ(CH)C=C
993
967
10.48
ν(CCO)
978
m
977
0.18
981
vw
γ(CH)ar,
5
895
20.88
γ(CH)C=C
910
m
γ(OH)
868
m
849
0.09
871
vw
γ(CH)ar
17b
851
w
852
vw
γ(CH)ar
810
w
809
w
γ(CH)
754
s
810
12.21
758
vw
γ(CH)ar
10b
748
s
φ(CCC)
4
698
m
769
49.02
688
w
γ(C=O)
758
46.43
γ(CH)
11
681
w
709
10.9
α(CCC)
592
m
595
vw
β(CH)
571
m
563
vw
α(CCC)
6a
519
w
658
10.99
511
vw
β(CO), α(CCC)
6b
598
43.27
β(CH)
494
m
462
0.92
φ(CC)
16a
582
89.8
γ(OH)
514
5.43
α(CCC)
460
19.93
β(CH)
9b
461
w
458
vw
φ(CC)
16b
a s—strong; m—medium; w—weak; v—very; sh—shoulder; b The symbol “ν” denotes stretching vibrations. “β” denotes in-plane bending modes. “γ” designates out-of-plane bending modes; “φ(CCC)” denotes the aromatic ring out-of-plane bending modes; “α(CCC)” designates the aromatic ring in-plane bending modes.
Table 6
The wavenumbers (cm) and assignments of bands from the FT-IR and FT-Raman spectra of lithium, sodium, potassium, rubidium and cesium o-coumarates.
Li o-Coumarate
Na o-Coumarate
K o-Coumarate
Rb o-Coumarate
Cs o-Coumarate
Assignment
No. [26]
FT-IR
FT-Raman
FT-IR
FT-Raman
FT-IR
FT-Raman
FT-IR
FT-Raman
FT-IR
FT-Raman
Exp.
Theoret.
Int.
Exp.
Exp.
Theoret.
Int.
Exp.
Exp.
Theoret.
Int.
Exp.
Exp.
Exp.
Exp.
Exp.
3564
W a
3839
75.44
3526
w
3811
69.42
3519
w
3840
66.91
3433
w
ν b(OH)ar
3197
15.93
3195
18.22
3194
18.26
ν(CH)ar, ν(CH)C=C
3154
w
3191
0.15
3188
0.24
w
3189
0.3
ν(CH)ar
2
3073
w
3186
8.64
3073
w
3071
w
3184
13.28
3070
vw
3070
w
3183
12.34
3075
vw
3071
w
3074
vw
3058
w
3061
m
ν(CH)ar, ν(CH)C=C
20a
3040
w
3038
vw
3038
w
3045
w
3035
w
3042
w
3036
w
3037
w
3035
w
ν(CH)ar, ν(CH)C=C
20b
2949
w
3172
4.45
3173
2.87
3171
3.09
2932
w
2932
vw
ν(CH)ar, ν(CH)C=C
7b
3179
7.74
3165
13.65
3167
12.54
ν(CH)C=C
3148
15.71
3153
15.89
3143
18.84
ν(CH)ar
1641
vs
1681
162.62
1638
vs
1678
101.79
1639
vs
1683
88.66
1642
vs
1639
vs
1640
vs
1631
vs
1627
vs
ν(CC)C=C
1605
m
1621
14.18
1645
vs
1605
m
1617
8.41
1608
m
1641
vs
1620
11.72
1608
m
1605
m
1607
m
1605
m
1605
vs
ν(CC)ar
8b
1643
34.17
1607
s
1638
22.02
1605
m
1641
19.49
ν(CC)ar
8a
1543
vs
1527
403.69
1546
vw
1557
vs
1568
460.22
1560
w
1557
vs
1559
411.25
1563
m
1560
vs
1555
w
1552
vs
νas(COO−)
1485
m
1486
89.69
1483
w
1483
71.48
1470
vw
1483
w
1484
71.48
1499
w
1499
w
1500
vw
1470
w
ν(CC)ar
19b
1458
vs
1530
63.41
1462
w
1460
vs
1525
30.82
1460
vs
1528
36.01
1469
vw
1464
vs
1467
vw
1456
s
1454
w
ν(CC)ar
19a
1414
vs
1430
700.96
1429
w
1412
vs
1398
600.77
1427
w
1412
vs
1399
708.7
1416
w
1410
vs
1409
w
1380
vs
1377
w
νs(COO−)
1345
sh
1324
19.83
1339
m
1321
22.08
1318
m
1339
w
1320
23.45
1342
vw
1344
s
1347
vw
β(CH)C=C, β(CH)ar
3
1360
36.02
1358
40.64
1359
35.57
β(CH)C=C, β(CH)ar
14
1298
m
1347
29.19
1290
sh
1298
m
1345
24.84
1298
w
1344
21.84
1303
sh
1308
w
1301
m
β(CH)C=C
1254
vs
1276
16.74
1256
s
1242
vs
1275
18.2
1243
s
1241
1271
20.04
1241
s
1244
vs
1245
s
1248
s
1263
m
β(CH)C=C
1234
sh
1267
127.71
1213
s
1265
96.92
1215
w
1221
1265
95.72
1223
m
1218
w
ν(C-OH)ar
1220
6.36
1218
12.07
1217
8.34
βCHar
1184
w
1191
57.63
1182
m
1193
56.94
1178
1190
61.43
1181
vw
1180
vw
β(CH)ar
9a
1155
w
1106
50.27
1162
m
1155
m
1106
45.17
1156
m
1163
1105
48.44
1156
w
1163
vw
1165
w
1150
m
1158
w
β(CH)ar
1094
s
1183
10
1097
vw
1090
s
1180
8.24
1094
vw
1090
1181
7.46
1093
vw
1092
m
1094
vw
1093
m
β(CH)ar
18b
1040
m
1066
2.65
1041
m
1040
vw
1062
3.7
1042
m
1035
w
1065
4.24
1038
m
1035
vw
1038
m
1040
w
1041
w
β(CH)ar
18a
1007
w
1010
w
1011
w
1003
m
1002
w
980
s
973
0.16
984
m
974
s
971
0.05
976
vw
969
s
971
0.12
970
w
968
m
970
vw
970
s
γ(CH)ar,
5
937
w
1034
32.89
922
vw
1033
35.16
1032
35.34
γ(CH)C=C
846
0.08
841
0.01
843
0.08
γ(CH)ar
17b
883
m
887
w
878
m
879
m
879
m
881
vw
881
m
884
vw
881
m
βs(COO−)
814
s
818
w
812
m
815
w
811
m
814
w
812
m
814
w
813
m
γ(CH)C=C
826
27.14
820
18.8
819
22.26
γ(CH)ar
10b
770
w
726
18.4
772
vw
763
w
726
38.13
764
vw
γs(COO−)
748
vs
764
w
743
s
730
w
741
s
743
vs
751
vs
φ(CCC)
4
718
s
756
68.5
720
w
752
70.9
753
69.87
712
w
γ(CH)
11
669
vw
705
0.4
689
vw
703
0.07
695
w
703
0.03
669
vw
α(CCC)
602
s
601
vw
600
m
603
w
597
m
600
w
598
m
599
w
596
m
βas(COO−)
575
m
570
s
572
vw
569
s
572
vw
569
m
570
vw
565
w
α(CCC)
6a
517
w
631
178.97
513
vw
515
m
610
21.82
516
vw
515
w
612
28.6
517
w
515
m
516
vw
515
w
α(CCC)
6b
466
9.93
490
w
467
9.95
486
w
466
8.74
488
w
482
vw
484
vw
φ(CC)
16a
517
0.36
512
5.44
514
7.96
α(CCC)
460
m
458
vw
455
m
450
m
452
w
451
w
454
w
461
w
φ (CC)
16b
a s—strong; m—medium; w—weak; v—very; sh—shoulder; b The symbol “ν” denotes stretching vibrations. “β” denotes in-plane bending modes. “γ” designates out-of-plane bending modes; “φ(CCC)” denotes the aromatic ring out-of-plane bending modes; “α(CCC)” designates the aromatic ring in-plane bending modes.
While comparing the spectra obtained for alkalimetal o-coumarates with that obtained for acid, there can be observed a disappearance of bands characteristic for stretching vibrations of carboxyl group νOH: 2847 cm−1 (IR), 3771 cm−1 (theoret.), νC=O: 1668 cm−1 (IR), 1665 cm−1 (Raman), 1781 cm−1 (theoret.) and deformation vibrations βOH: 1460 cm−1 (IR), 1446 cm−1 (Raman), 1279 cm−1 (theoret.). The medium intensity bands connected with carboxylic group also disappeared, namely νC-OH: 1169 cm−1 (IR), 1170 cm−1 (Raman), γCO (698 cm−1 and 688 cm−1 in IR and Raman, respectively).Besides there are other bands characteristic only for spectra of salts concerning asymmetric and symmetric stretching vibrations νasCOO− and νsCOO−; in plane deformations βasCOO− and βsCOO− and out-of-plane bending γsCOO− of carboxylate group. The very strong bands assigned to the stretching vibrations of the carboxylate group are located in the range 1543–1380 cm−1 (IR), 1563–1377 cm−1 (Raman).The IR spectra of trans o-coumaric acid and lithium, sodium, potassium, rubidium and cesium o-coumarates.The wavenumbers (cm−1) and assignments of bands occurring in the experimental FT-IR, FT-Raman and calculated spectra of trans o-coumaric acid.a s—strong; m—medium; w—weak; v—very; sh—shoulder; b The symbol “ν” denotes stretching vibrations. “β” denotes in-plane bending modes. “γ” designates out-of-plane bending modes; “φ(CCC)” denotes the aromatic ring out-of-plane bending modes; “α(CCC)” designates the aromatic ring in-plane bending modes.The wavenumbers (cm) and assignments of bands from the FT-IR and FT-Raman spectra of lithium, sodium, potassium, rubidium and cesium o-coumarates.a s—strong; m—medium; w—weak; v—very; sh—shoulder; b The symbol “ν” denotes stretching vibrations. “β” denotes in-plane bending modes. “γ” designates out-of-plane bending modes; “φ(CCC)” denotes the aromatic ring out-of-plane bending modes; “α(CCC)” designates the aromatic ring in-plane bending modes.These band are sensitive to the type of metal coordination and degree of complex hydration. βasCOO− and βsCOO− are in the range 883–596 cm−1 (IR), 887–596 cm−1(Raman) and γsCOO− modes of are at ~770 cm−1 (IR), (Raman). The difference between the wavenumbers of asymmetric and symmetric stretching of the carboxylic anion vibrations (ΔνCOO−) increased in the IR and Raman spectra from lithium to cesium o-coumarates. The increase in this value means the increase in the ionic character of metal-oxygen bond. The values of ∆βCOO− were also calculated and increased in the IR spectra along the series: Na→Li→K→Rb→Cs (278, 281, 282, 283, 285 cm−1) in Raman the order is: K→Na→Rb→Li (276, 281, 285, 286 cm−1).Correlations between the chosen wavenumbers of vibrational bands in the IR spectra of o-coumarates and some alkalimetal parameters, such as electronegativity, atomic and ionic radii, affinity, energy of ionization and ionic potential were analyzed. The best correlation was obtained for ionic radius (R = 0.9888) and ionization energy (R = 0.9687) for deformation band of carboxylate group (βasCOO−). The analysis of these data shows that the ionic radius and ionization energy are the most important metal parameters in view of influence of the metal on the vibration structure of o-coumarates.In the spectra of trans o-coumaric acid and its metalsalts bands from the hydroxyl group attached to the aromatic ring are present: (1) in the spectrum of the acid: νOHar 3356 cm−1 (IR), 3837 cm−1 (theoret.); νC-OHar 1219 cm−1 (IR), 1225 cm−1 (Raman), 1274 cm−1 (theoret..); (2) in the spectra of salts: νOHar 3564-3433 cm−1 (IR), 3840–3811 cm−1 (theoret..); νC-OHar 1234–1213 cm−1 (IR), 1215 cm−1 (Raman), 1267–1265 cm−1 (theoret.). Bands are located in the range 3154–2932 cm−1 (IR), 3074–2932 cm−1 (Raman) 3200–3143 cm−1 (theoret.), can be assigned to the CH stretching modes of aromatic ring and the double bond between C8 and C9 atoms. A peak around 1640 cm−1 (IR and Raman), 1680 cm−1 (theoret.) derives from the CC stretching vibrations of the double bond. The bands of the β(CH) vibrations are located in the range 1345–1035 cm (IR), 1333–1038 cm (Raman) and 1326–1062 cm (theoret.). The bands at 980–712 cm (IR), 984–720 cm (Raman) and 1037–752 cm (theoret.) are assigned to out-of-plane bending vibrations γCH. The wavenumbers of aromatic bands numbered as 20a, 20b, 7b, 19a, 9a, 5, 6b, 16a and 16b decrease in comparison to free acid, while the wavenumbers of 8b and 3 bands in the spectra increase.
2.4. UV Spectra
The UV spectra of trans o-coumaric acid and lithium, sodium, potassium, rubidium and cesium o-coumarates were recorded. The maxima of π→π* bands for trans o-coumaric acid were located at 210, 272, and 314 nm. In the UV spectra of o-coumarates the bands were shifted toward lower wavelengths, with the maxima at 210, 268, 312 nm respectively, similarly for all the salts. The noted hypsochromic shifts indicate a decrease in the delocalization energy and therefore, a perturbation effect of alkalimetals on the electronic system of ligand.
2.5. Microbial Activity
Evaluation of the antimicrobial activity of trans o-coumaric acid and pan class="Chemical">lithium, sodium, potassium, rubidium and cesium o-coumarates was measured as a degree of growth inhibition or stimulation in individual bacteria or fungi cultures, in relation to the control (non-treated) sample and depicted as a percent of control. The average values given in Figure 9 were calculated from the data obtained in the four experiments taken for each preparation and strain. The results obtained after 24 and 48 h of incubation are shown in Figure 9.
Figure 9
The degree of growth inhibition induced by the studied compounds in Baccillus ssubtilis (BS), Candida albicans (CA), Escherichia coli (EC), Pseudomonas aeruginosa (PA), Proteus vulgaris (PV) and Staphylococus aureus (SA); evaluated after 24 and 48 h of incubation.
The degree of growth inhibition induced by the studied compounds in Baccillus ssubtilis (BS), Candida albicans (CA), Escherichia coli (EC), Pseudomonas aeruginosa (PA), Proteus vulgaris (PV) and Staphylococus aureus (SA); evaluated after 24 and 48 h of incubation.Trans o-coumaric acid induced a considerable growth inhibition in Bacillus subtilis, Proteus vulgaris and Staphylococcus aureus after 24 h and 48 h of treatment. The studied compounds strongly inhibited the growth of the bacterium Proteus vulgaris after 24 h of incubation. Lithium, sodium andpotassium salts support the growth of Bacillus subtilis, Staphylococcus aureus and Escherichia coli. All salts showed a stimulating effect after 48 hours incubation in relation to bacteria Pseudomonas aeruginosa. Potassium and rubidium salts inhibited the growth of Escherichia coli to the lowest degree. Strong inhibitory effects of cesium and rubidium o-coumarates shown relative to Staphylococcus aureus (~95%).The correlation between the physicochemical parameters and microbial properties of pan class="Chemical">trans o-coumaric acid and alkalimetal o-coumarates was examined. On the basis of the spectroscopic data: the values of wavenumbers of infrared spectra of the compounds and the parameters describing their antimicrobial activity the principal component analysis (PCA) was performed. This method is most commonly used for multivariate exploratory analysis of experimental data. Analysis was made on the basis of the factor loadings values being correlation coefficients describing the correlation between the antimicrobial properties of the compounds and the wavenumbers of selected bands in FT-IR spectra. Based on the screen chart, two main components were selected to data analysis. To investigate which of the bands described by the wavenumbers, are strongly positively or negatively correlated with the microbiological data, the projection weights on the plane defined by pairs of main factors was made. Correlations are determined by the angle between the two weight vectors, which initial point and the ends are defined by respective weight values. The relationship between the input variables and the main components is presented as a graph of configuration of points representing the variables in the system of the first two principal components (Figure 10 and Figure 11). The coordinates of these points are corresponding coefficients of variables, in this case, the wavenumbers of selected bands in the FT-IR spectra. The more given variable is closer to the edge of the wheel, the better is its representation of the main components defining the coordinate system, i.e., the greater part of the information contained in the variable is carried by the main components.
Figure 10
The values of the band wavenumbers in the FT–IR spectra of trans o-coumaric acid and alkali metal o-coumarates in relation to the degree of growth inhibition of the bacteria Proteus vulgaris (PV) after 24 and 48 h of incubation in the two principal components system.
Figure 11
The values of the band wavenumbers in the FT–IR spectra of trans o-coumaric acid and alkali metal o-coumarates in relation to the degree of inhibition of growth in Staphylococcus aureus (SA) after 24 and 48 h of incubation in the two principal components system.
The values of the band wavenumbers in the FT–IR spectra of trans o-coumaric acid and alkalimetal o-coumarates in relation to the degree of growth inhibition of the bacteria Proteus vulgaris (PV) after 24 and 48 h of incubation in the two principal components system.The values of the band wavenumbers in the FT–IR spectra of trans o-coumaric acid and alkalimetal o-coumarates in relation to the degree of inhibition of growth in Staphylococcus aureus (SA) after 24 and 48 h of incubation in the two principal components system.Analysis of the data leads to the conclusion that the most statistically significant correlation was demonstrated between the degree of inhibition of bacterial growth: Proteus vulgaris (PV) and Staphylococcus aureus (SA) and the wavenumbers of the following bands in the spectra of the studied compounds: positive: 20b, βas(COO−) and negative: 8b, both after 24 and 48 h of incubation. It shows that the FT-IR spectra can be a good source of data for the quantitative analysis of the relationship between the molecular structure of the compound and its biological activity. This finding strongly points to the fact, that the analysis of the physicochemical structures can bring significant prerequisites on the biological activity of compounds. The presented method and analysis can be found useful in design of the syntheses of microbial active analogues.
3. Experimental Section
3.1. General Information
Trans o-coumaric acid was purchased from Sigma-Aldrich (Saint Louis, MO, USA) with a stated purity 97% and was used as such without further purification. Lithium, sodium, potassium, rubidium and cesium o-coumarates were prepared by dissolving trans o-coumaric acid powder in a water solution of the appropriate alkali metal hydroxide in a stoichiometric ratio of 1:1. The mixed solution was slowly condensed at 70 °C, then,the solvent was removed by drying at 105 °C. The obtained salts were anhydrous, as indicated by a lack of bands characteristic of crystallization water in the corresponding FT-IR spectra.
3.2. Spectroscopic Methods
The FT-IR spectra were recorded with an Equinox 55 FT-IR spectrometer Bruker, (Billerica, MA, USA) within the range of 4000–400 cm. The resolution of spectrometer was 1 cm. Samples in the solid state were measured in KBr matrix pellets obtained with hydraulic press, under 739 MPa pressure. FT-Raman spectra of solid samples in capillary tubes were recorded in the range of 4000–400 cm−1 with a FT-Raman accessory of the Perkin Elmer (Waltham, MA, USA) System 2000. The 1H (400.15 MHz), 13C (100.63 MHz) spectra were measured on a Bruker Avance II 400 spectrometer in DMSO-d6 solution at 25°C. Chemical shifts are reported in ppm on δ scale and referenced to the solvent resonances (2.50 ppm for 1H and 39.52 ppm for 13C). The UV spectra in water solution were recorded on a HACH-LANGE (Düsseldorf, Germany) spectrophotometer between 190 and 400 nm. The compounds were studied in aqueous solutions with concentrations 5 × 10−5 mol/dm3.The crystal structure of o-coumaric acid was found in the Crystallographic Structural Data Base (CSD) crystallographic database and visualized with the Mercury 1.4.2 program [22].
3.3. Quantum-Mechanical Calculations
Calculations of optimized geometrical structures of trans o-coumaric acid and its alkalimetalsalts were performed using the GAUSSIAN 09 package of programs [21] running on a PC computer.
3.4. Microbiological Tests
Five species of pan class="Chemical">bacteria: Escherichia coli (PCM 2268), Bacillus subtilis (PCM 2021), Proteus vulgaris (PCM 2269), Pseudomonas aeruginosa (PCM 2270), Staphylococcus aureus (PCM 2267) and one species of fungi Candida albicans (PCM 2566) were used for antimicrobial tests. Bacterial cultures where purchased from Polish Collection of Microorganisms (PCM, Wroclaw, Poland) .The investigated microorganisms were inoculated on broth medium and stored in 35 °C (for fungi in 25 °C) for 24 h. Solutions of tested compounds were prepared by dissolving 0.2 g of each of them in 9.8 mL of deionized water. The concentration of compounds in the culture broth was 0.1%. The growth of tested cells was monitored using turbidimetry by measuring the optical density at 600 nm on JASCO spectrophotometer. The microbiological tests for investigated compounds were carried out in deionized water medium. The samples were incubated in 35 °C for bacteria and 25 °C for fungi. The number of colonies was directly proportional to optical density, which was estimated after 24 h and 48 h incubation.
3.5. Elementary Analysis
The elementary analysis for all synthesized complexes were performed. The complexes were anhydrous. The results of elementary analysis are as follows: for lithium o-coumarate: %C = 60.42:60.49 (calc. %C = 60.36), %H = 4.29:4.33 (calc. %H = 4.22); for sodium o-coumarate: %C = 56.57:56.75 (calc. %C= 58.07), %H = 3.67:3.70 (calc. %H = 3.62); for potassium o-coumarate: %C= 53.30:53.31 (calc. %C= 53.49), %H = 3.54:3.60 (calc. %H = 3.49); for rubidium o-coumarate: %C= 42.99:43.03 (calc. %C= 43.48), %H = 2.95:3.03 (calc. %H = 2.84); for cesium o-coumarate: %C= 36.99:37.03 (calc. %C= 36.51), %H = 2.55:2.63 (calc. %H = 2.38).
4. Conclusions
In this paper the influence of lithium, pan class="Chemical">sodium, potassium, rubidium and cesiumcations on the electronic system of trans o-coumaric acid was studied by means of FT-IR, FT-Raman, UV-VIS, 1H- and 13C-NMR, ab initio calculations and microbiological tests. Substitution of hydrogen with alkalimetals ions in the carboxylic group brought about some characteristic changes in the molecular spectra as well as in the geometrical structures of the investigated molecules. The experimental parameters were compared to calculated characteristics of studied compounds and they indicate good linear correlations.
The calculated aromaticity indices (Aj, BAC and I6–Bird’s index) for trans o-coumaric acid were almost the same as those of all salts. The aromaticity increased in the series: trans o-coumaric acid→ p-coumaric acid→cinnamic acid, what suggests that the compounds studied here in possess less aromatic properties than p-coumaric acid and cinnamic acid. In the case of salts the same relationship is observed. Theoretical studies of the geometrical parameters have shown that the substitution of the metal in the carboxyl group causes a slight change in the geometry of the aromatic ring. Geometric parameters (almost the same values of bond lengths and angles in the ring for all the salts, independently on the metal ion also suggest that p-coumaric acid has a higher aromaticity. Perturbation of the electronic system of molecules increases along the series: acid→Li→Na→K.Chemical shift changes of were also noted in the proton and carbon NMR spectra. The chemical shifts of all protons decreased in the series Li→Na→K→Rb→Cs and the chemical shifts of carbon no. 5 and 6 increased in the same series. The highest correlation coefficients were obtained between the experimental data and the theoretical ones calculated by the NBO and APT methods.The intensity and wavenumbers in the case of bands No. 20a, 20b, 7b, 19a, 9a, 5, 6b, 16a and 16b decrease in comparison to the free acid, which points to a perturbation in the electron charge distribution of the ligand. Ionic radius and ionization energy are the most important metal parameters in view of the influence of the metal on the vibration structure of o-coumarates. In the case of benzoates and o-coumarates the ΔνCOO− values increase in the series: lithium→sodium→potassium→rubidium→cesium (in FT-IR and FT-Raman spectra). In the case of salicylates and p-coumarates these values scatter [27]. The increase in the value of ΔνCOO− means the increase in the ionic character of metal-oxygen bond. In addition, the value of ΔνCOO− for p-coumaric acid was higher than o-coumaric acid (in FT-IR, FT-Raman and theoretical spectra). In the UV-VIS spectra of the studied compounds, the hipsochromic shifts indicate that the alkalimetalcations perturb the electronic system of the molecule.After 24 and 48 h of incubation, trans o-coumaric completely inhibited growth of the bacteria: Bacillus subtilis, Proteus vulgaris and Staphylococcus aureus. Based on the principal component analysis, it was found that the most statistically significant correlations exist between the degree of inhibition of bacterial growth Proteus vulgaris and Staphylococcus aureus and the wavenumbers of 20b, βas(COO−) and 8b bands in the spectra of studied compounds.The electronic properties of substituent have a significant effect on the degree of ionization and the polarity of chemical compounds, which influences their ability to penetrate cell membranes and the strength of binding to receptors. Therefore it is very important to be able to measure the electronic parameters of molecules and connect them with the corresponding biological properties. In addition to the physicochemical parameters (dipole moments, hydrogen bonding, conformation and distances between the atoms) discussed above, there are others which also play a role in molecular modeling. The use of these parameters is limited, because of the difficulty in measuring them. However, the biological activity of most compounds is a result of many physicochemical parameters.
Authors: P Koczoń; J Piekut; M Borawska; R Swisłocka; W Lewandowski Journal: Spectrochim Acta A Mol Biomol Spectrosc Date: 2005-06 Impact factor: 4.098
Authors: M Kalinowska; B Laderiere; P Champagne; M Kowczyk-Sadowy; W Lewandowski Journal: Spectrochim Acta A Mol Biomol Spectrosc Date: 2012-11-07 Impact factor: 4.098