Literature DB >> 25687466

High-throughput screening to identify inhibitors of lysine demethylases.

Molly Gale1, Qin Yan.   

Abstract

Lysine demethylases (KDMs) are epigenetic regulators whose dysfunction is implicated in the pathology of many human diseases including various types of cancer, inflammation and X-linked intellectual disability. Particular demethylases have been identified as promising therapeutic targets, and tremendous efforts are being devoted toward developing suitable small-molecule inhibitors for clinical and research use. Several High-throughput screening strategies have been developed to screen for small-molecule inhibitors of KDMs, each with advantages and disadvantages in terms of time, cost, effort, reliability and sensitivity. In this Special Report, we review and evaluate the High-throughput screening methods utilized for discovery of novel small-molecule KDM inhibitors.

Entities:  

Keywords:  High-throughput screening; JmjC; KDM; LSD1; lysine demethylase; small-molecule inhibitor

Mesh:

Substances:

Year:  2015        PMID: 25687466      PMCID: PMC4356004          DOI: 10.2217/epi.14.63

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  45 in total

1.  Configuration of a high-content imaging platform for hit identification and pharmacological assessment of JMJD3 demethylase enzyme inhibitors.

Authors:  Alpa Mulji; Carl Haslam; Fiona Brown; Rebecca Randle; Bhumika Karamshi; Julia Smith; Robert Eagle; Jordi Munoz-Muriedas; Joanna Taylor; Arshad Sheikh; Angela Bridges; Kirsty Gill; Rob Jepras; Penny Smee; Mike Barker; Mike Woodrow; John Liddle; Pamela Thomas; Emma Jones; Laurie Gordon; Rob Tanner; Melanie Leveridge; Sue Hutchinson; Margaret Martin; Murray Brown; Laurens Kruidenier; Roy Katso
Journal:  J Biomol Screen       Date:  2012-01

2.  Histone demethylation by a family of JmjC domain-containing proteins.

Authors:  Yu-ichi Tsukada; Jia Fang; Hediye Erdjument-Bromage; Maria E Warren; Christoph H Borchers; Paul Tempst; Yi Zhang
Journal:  Nature       Date:  2005-12-18       Impact factor: 49.962

3.  Development of homogeneous luminescence assays for histone demethylase catalysis and binding.

Authors:  Akane Kawamura; Anthony Tumber; Nathan R Rose; Oliver N F King; Michelle Daniel; Udo Oppermann; Tom D Heightman; Christopher Schofield
Journal:  Anal Biochem       Date:  2010-05-21       Impact factor: 3.365

4.  Enabling lead discovery for histone lysine demethylases by high-throughput RapidFire mass spectrometry.

Authors:  Sue E Hutchinson; Melanie V Leveridge; Michelle L Heathcote; Peter Francis; Laura Williams; Michelle Gee; Jordi Munoz-Muriedas; Bill Leavens; Anthony Shillings; Emma Jones; Paul Homes; Stuart Baddeley; Chun-Wa Chung; Angela Bridges; Argyrides Argyrou
Journal:  J Biomol Screen       Date:  2011-08-21

5.  Novel histone demethylase LSD1 inhibitors selectively target cancer cells with pluripotent stem cell properties.

Authors:  Jing Wang; Fei Lu; Qi Ren; Hong Sun; Zhengshuang Xu; Rongfeng Lan; Yuqing Liu; David Ward; Junmin Quan; Tao Ye; Hui Zhang
Journal:  Cancer Res       Date:  2011-10-05       Impact factor: 12.701

6.  A selective inhibitor and probe of the cellular functions of Jumonji C domain-containing histone demethylases.

Authors:  Xuelai Luo; Yongxiang Liu; Stefan Kubicek; Johanna Myllyharju; Anthony Tumber; Stanley Ng; Ka Hing Che; Jessica Podoll; Tom D Heightman; Udo Oppermann; Stuart L Schreiber; Xiang Wang
Journal:  J Am Chem Soc       Date:  2011-05-31       Impact factor: 15.419

7.  High-throughput virtual screening identifies novel N'-(1-phenylethylidene)-benzohydrazides as potent, specific, and reversible LSD1 inhibitors.

Authors:  Venkataswamy Sorna; Emily R Theisen; Bret Stephens; Steven L Warner; David J Bearss; Hariprasad Vankayalapati; Sunil Sharma
Journal:  J Med Chem       Date:  2013-11-23       Impact factor: 7.446

8.  A scintillation proximity assay for histone demethylases.

Authors:  Wenyu Yu; Mohammad S Eram; Taraneh Hajian; Aleksandra Szykowska; Nicola Burgess-Brown; Masoud Vedadi; Peter J Brown
Journal:  Anal Biochem       Date:  2014-07-08       Impact factor: 3.365

9.  Large-scale global identification of protein lysine methylation in vivo.

Authors:  Xing-Jun Cao; Anna M Arnaudo; Benjamin A Garcia
Journal:  Epigenetics       Date:  2013-04-17       Impact factor: 4.528

10.  A selective jumonji H3K27 demethylase inhibitor modulates the proinflammatory macrophage response.

Authors:  Laurens Kruidenier; Chun-wa Chung; Zhongjun Cheng; John Liddle; KaHing Che; Gerard Joberty; Marcus Bantscheff; Chas Bountra; Angela Bridges; Hawa Diallo; Dirk Eberhard; Sue Hutchinson; Emma Jones; Roy Katso; Melanie Leveridge; Palwinder K Mander; Julie Mosley; Cesar Ramirez-Molina; Paul Rowland; Christopher J Schofield; Robert J Sheppard; Julia E Smith; Catherine Swales; Robert Tanner; Pamela Thomas; Anthony Tumber; Gerard Drewes; Udo Oppermann; Dinshaw J Patel; Kevin Lee; David M Wilson
Journal:  Nature       Date:  2012-08-16       Impact factor: 49.962

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  5 in total

Review 1.  LSD1 Histone Demethylase Assays and Inhibition.

Authors:  D Hayward; P A Cole
Journal:  Methods Enzymol       Date:  2016-02-23       Impact factor: 1.600

2.  Screen-identified selective inhibitor of lysine demethylase 5A blocks cancer cell growth and drug resistance.

Authors:  Molly Gale; Joyce Sayegh; Jian Cao; Michael Norcia; Peter Gareiss; Denton Hoyer; Jane S Merkel; Qin Yan
Journal:  Oncotarget       Date:  2016-06-28

Review 3.  Epigenetic assays for chemical biology and drug discovery.

Authors:  Sheraz Gul
Journal:  Clin Epigenetics       Date:  2017-04-21       Impact factor: 6.551

Review 4.  The Emerging Role of Histone Demethylases in Renal Cell Carcinoma.

Authors:  Xiaoqiang Guo; Qiaoxia Zhang
Journal:  J Kidney Cancer VHL       Date:  2017-05-03

5.  Machine-Learning-Enabled Virtual Screening for Inhibitors of Lysine-Specific Histone Demethylase 1.

Authors:  Jiajun Zhou; Shiying Wu; Boon Giin Lee; Tianwei Chen; Ziqi He; Yukun Lei; Bencan Tang; Jonathan D Hirst
Journal:  Molecules       Date:  2021-12-10       Impact factor: 4.411

  5 in total

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