Literature DB >> 25687462

Candidate gene methylation studies are at high risk of erroneous conclusions.

Andrey A Shabalin1, Karolina A Aberg, Edwin J C G van den Oord.   

Abstract

Entities:  

Keywords:  DNA methylation; candidate gene study; false discoveries; methylome-wide association study; principal component analysis

Mesh:

Year:  2015        PMID: 25687462      PMCID: PMC5503464          DOI: 10.2217/epi.14.70

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


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  6 in total

1.  False discoveries and models for gene discovery.

Authors:  Edwin J C G van den Oord; Patrick F Sullivan
Journal:  Trends Genet       Date:  2003-10       Impact factor: 11.639

2.  Assessing the probability that a positive report is false: an approach for molecular epidemiology studies.

Authors:  Sholom Wacholder; Stephen Chanock; Montserrat Garcia-Closas; Laure El Ghormli; Nathaniel Rothman
Journal:  J Natl Cancer Inst       Date:  2004-03-17       Impact factor: 13.506

3.  Global DNA methylation level in whole blood as a biomarker in head and neck squamous cell carcinoma.

Authors:  Debra Ting Hsiung; Carmen J Marsit; E Andres Houseman; Karen Eddy; C Sloane Furniss; Michael D McClean; Karl T Kelsey
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2007-01       Impact factor: 4.254

4.  Methylome-wide association study of schizophrenia: identifying blood biomarker signatures of environmental insults.

Authors:  Karolina A Aberg; Joseph L McClay; Srilaxmi Nerella; Shaunna Clark; Gaurav Kumar; Wenan Chen; Amit N Khachane; Linying Xie; Alexandra Hudson; Guimin Gao; Aki Harada; Christina M Hultman; Patrick F Sullivan; Patrik K E Magnusson; Edwin J C G van den Oord
Journal:  JAMA Psychiatry       Date:  2014-03       Impact factor: 21.596

Review 5.  Dietary and lifestyle factors of DNA methylation.

Authors:  Unhee Lim; Min-Ae Song
Journal:  Methods Mol Biol       Date:  2012

6.  DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.

Authors:  Jordana T Bell; Athma A Pai; Joseph K Pickrell; Daniel J Gaffney; Roger Pique-Regi; Jacob F Degner; Yoav Gilad; Jonathan K Pritchard
Journal:  Genome Biol       Date:  2011-01-20       Impact factor: 13.583

  6 in total
  5 in total

1.  Studying the effects of diet on DNA methylation: challenges, pitfalls and a way forward.

Authors:  Karlijn A C Meeks; Mary Nicolaou; Elizabeth Young; Adebowale Adeyemo
Journal:  Br J Nutr       Date:  2019-06-06       Impact factor: 3.718

Review 2.  Associations between indicators of socioeconomic position and DNA methylation: a scoping review.

Authors:  Janine Cerutti; Alexandre A Lussier; Yiwen Zhu; Jiaxuan Liu; Erin C Dunn
Journal:  Clin Epigenetics       Date:  2021-12-14       Impact factor: 6.551

Review 3.  Epigenetic Modifications as Biomarkers of Tumor Development, Therapy Response, and Recurrence across the Cancer Care Continuum.

Authors:  Margaret L Thomas; Paola Marcato
Journal:  Cancers (Basel)       Date:  2018-04-01       Impact factor: 6.639

4.  The Role of DNA Methylation in Ischemic Stroke: A Systematic Review.

Authors:  Minyan Zeng; Juanying Zhen; Xiaodan Zheng; Hongyan Qiu; Xiaonan Xu; Jun Wu; Zhijian Lin; Jun Hu
Journal:  Front Neurol       Date:  2020-10-27       Impact factor: 4.003

5.  Epigenome-wide DNA methylation and risk of breast cancer: a systematic review.

Authors:  Kaoutar Ennour-Idrissi; Dzevka Dragic; Francine Durocher; Caroline Diorio
Journal:  BMC Cancer       Date:  2020-10-31       Impact factor: 4.430

  5 in total

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