Literature DB >> 25686373

Arginine-rhamnosylation as new strategy to activate translation elongation factor P.

Jürgen Lassak1, Eva C Keilhauer2, Maximilian Fürst1, Kristin Wuichet3, Julia Gödeke4, Agata L Starosta5, Jhong-Min Chen6, Lotte Søgaard-Andersen3, Jürgen Rohr6, Daniel N Wilson5, Susanne Häussler7, Matthias Mann2, Kirsten Jung1.   

Abstract

Ribosome stalling at polyproline stretches is common and fundamental. In bacteria, translation elongation factor P (EF-P) rescues such stalled ribosomes, but only when it is post-translationally activated. In Escherichia coli, activation of EF-P is achieved by (R)-β-lysinylation and hydroxylation of a conserved lysine. Here we have unveiled a markedly different modification strategy in which a conserved arginine of EF-P is rhamnosylated by a glycosyltransferase (EarP) using dTDP-L-rhamnose as a substrate. This is to our knowledge the first report of N-linked protein glycosylation on arginine in bacteria and the first example in which a glycosylated side chain of a translation elongation factor is essential for function. Arginine-rhamnosylation of EF-P also occurs in clinically relevant bacteria such as Pseudomonas aeruginosa. We demonstrate that the modification is needed to develop pathogenicity, making EarP and dTDP-L-rhamnose-biosynthesizing enzymes ideal targets for antibiotic development.

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Year:  2015        PMID: 25686373      PMCID: PMC4451828          DOI: 10.1038/nchembio.1751

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  58 in total

1.  PoxA, yjeK, and elongation factor P coordinately modulate virulence and drug resistance in Salmonella enterica.

Authors:  William Wiley Navarre; S Betty Zou; Hervé Roy; Jinglin Lucy Xie; Alexei Savchenko; Alexander Singer; Elena Edvokimova; Lynne R Prost; Runjun Kumar; Michael Ibba; Ferric C Fang
Journal:  Mol Cell       Date:  2010-07-30       Impact factor: 17.970

2.  Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

Authors:  Susanne Ude; Jürgen Lassak; Agata L Starosta; Tobias Kraxenberger; Daniel N Wilson; Kirsten Jung
Journal:  Science       Date:  2012-12-13       Impact factor: 47.728

3.  Hepatitis C virus complete life cycle screen for identification of small molecules with pro- or antiviral activity.

Authors:  Juliane Gentzsch; Bettina Hinkelmann; Lars Kaderali; Herbert Irschik; Rolf Jansen; Florenz Sasse; Ronald Frank; Thomas Pietschmann
Journal:  Antiviral Res       Date:  2010-12-15       Impact factor: 5.970

4.  Recycling of peptidyl-tRNAs by peptidyl-tRNA hydrolase counteracts azithromycin-mediated effects on Pseudomonas aeruginosa.

Authors:  Julia Gödeke; Christian Pustelny; Susanne Häussler
Journal:  Antimicrob Agents Chemother       Date:  2013-01-14       Impact factor: 5.191

5.  Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips.

Authors:  Juri Rappsilber; Matthias Mann; Yasushi Ishihama
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

6.  The biosynthesis of protein-bound hypusine (N epsilon -(4-amino-2-hydroxybutyl)lysine). Lysine as the amino acid precursor and the intermediate role of deoxyhypusine (N epsilon -(4-aminobutyl)lysine).

Authors:  M H Park; H L Cooper; J E Folk
Journal:  J Biol Chem       Date:  1982-06-25       Impact factor: 5.157

7.  The autotransporter esterase EstA of Pseudomonas aeruginosa is required for rhamnolipid production, cell motility, and biofilm formation.

Authors:  Susanne Wilhelm; Aneta Gdynia; Petra Tielen; Frank Rosenau; Karl-Erich Jaeger
Journal:  J Bacteriol       Date:  2007-07-13       Impact factor: 3.490

8.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

9.  Predicting the pathway involved in post-translational modification of elongation factor P in a subset of bacterial species.

Authors:  Marc Bailly; Valérie de Crécy-Lagard
Journal:  Biol Direct       Date:  2010-01-13       Impact factor: 4.540

10.  Formation of the first peptide bond: the structure of EF-P bound to the 70S ribosome.

Authors:  Gregor Blaha; Robin E Stanley; Thomas A Steitz
Journal:  Science       Date:  2009-08-21       Impact factor: 47.728

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  47 in total

Review 1.  Non-canonical roles of tRNAs and tRNA mimics in bacterial cell biology.

Authors:  Assaf Katz; Sara Elgamal; Andrei Rajkovic; Michael Ibba
Journal:  Mol Microbiol       Date:  2016-06-28       Impact factor: 3.501

2.  Carbohydrates: Translation from sticky to sweet.

Authors:  Michela G Tonetti
Journal:  Nat Chem Biol       Date:  2015-04       Impact factor: 15.040

Review 3.  Ribosome pausing, arrest and rescue in bacteria and eukaryotes.

Authors:  Allen R Buskirk; Rachel Green
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-03-19       Impact factor: 6.237

4.  Extragenic Suppression of Elongation Factor P Gene Mutant Phenotypes in Erwinia amylovora.

Authors:  Sara M Klee; Judith P Sinn; Aleah C Holmes; Brian L Lehman; Teresa Krawczyk; Kari A Peter; Timothy W McNellis
Journal:  J Bacteriol       Date:  2019-05-08       Impact factor: 3.490

Review 5.  Nucleocytoplasmic O-glycosylation in protists.

Authors:  Christopher M West; Hyun W Kim
Journal:  Curr Opin Struct Biol       Date:  2019-05-22       Impact factor: 6.809

6.  Carbonyl reduction by YmfI in Bacillus subtilis prevents accumulation of an inhibitory EF-P modification state.

Authors:  Katherine R Hummels; Anne Witzky; Andrei Rajkovic; Rodney Tollerson; Lisa A Jones; Michael Ibba; Daniel B Kearns
Journal:  Mol Microbiol       Date:  2017-08-22       Impact factor: 3.501

Review 7.  Translation elongation factor P (EF-P).

Authors:  Katherine R Hummels; Daniel B Kearns
Journal:  FEMS Microbiol Rev       Date:  2020-03-01       Impact factor: 16.408

8.  Alternative synthesis and antibacterial evaluation of 1,5-dideoxy-1,5-imino-L-rhamnitol.

Authors:  Suresh Dharuman; Yichen Wang; David Crich
Journal:  Carbohydr Res       Date:  2015-11-04       Impact factor: 2.104

9.  The bacterial arginine glycosyltransferase effector NleB preferentially modifies Fas-associated death domain protein (FADD).

Authors:  Nichollas E Scott; Cristina Giogha; Georgina L Pollock; Catherine L Kennedy; Andrew I Webb; Nicholas A Williamson; Jaclyn S Pearson; Elizabeth L Hartland
Journal:  J Biol Chem       Date:  2017-08-31       Impact factor: 5.157

10.  Mutagenesis and Functional Analysis of the Bacterial Arginine Glycosyltransferase Effector NleB1 from Enteropathogenic Escherichia coli.

Authors:  Tania Wong Fok Lung; Cristina Giogha; Kristina Creuzburg; Sze Ying Ong; Georgina L Pollock; Ying Zhang; Ka Yee Fung; Jaclyn S Pearson; Elizabeth L Hartland
Journal:  Infect Immun       Date:  2016-04-22       Impact factor: 3.441

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