Literature DB >> 25683442

Draft genome sequence of algal polysaccharides degradation bacterium, Flammeovirga sp. OC4.

Yang Liu1, Zhiwei Yi2, Yaping Cai3, Runying Zeng4.   

Abstract

Flammeovirga sp. OC4 was isolated from seawater sample of the South China Sea using the method of in-situ-enrichment, which has the ability to degrade algal polysaccharides. Colonies are reddish orange in the exponential growth phase and turn white in the late stationary growth phase, which is the indicator of the bacterial death. Here, we present an annotated draft genome sequence of Flammeovirga sp. OC4, which contains 8,069,312bp with a G+C content of 34.8%. This information regarding the genetic basis of this bacterium can greatly advance our understanding of algal polysaccharides-degrading mechanism and the physiology of this species.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Algal polysaccharides degradation; Enrichment culturing in situ; Flammeovirga; Genome sequence

Mesh:

Substances:

Year:  2015        PMID: 25683442     DOI: 10.1016/j.margen.2015.02.001

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  6 in total

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Authors:  Catherine M Luria; Linda A Amaral-Zettler; Hugh W Ducklow; Jeremy J Rich
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4.  Genome sequence of a high agarase-producing strain Flammeovirga sp. SJP92.

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Journal:  Stand Genomic Sci       Date:  2017-01-26

5.  A Novel Bifunctional Endolytic Alginate Lyase with Variable Alginate-Degrading Modes and Versatile Monosaccharide-Producing Properties.

Authors:  Chune Peng; Qingbin Wang; Danrong Lu; Wenjun Han; Fuchuan Li
Journal:  Front Microbiol       Date:  2018-02-08       Impact factor: 5.640

6.  Elucidation of degrading pattern and substrate recognition of a novel bifunctional alginate lyase from Flammeovirga sp. NJ-04 and its use for preparation alginate oligosaccharides.

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  6 in total

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