Literature DB >> 25680342

Complete genome sequence analysis of two human coxsackievirus A9 strains isolated in Yunnan, China, in 2009.

Jiansheng Liu1, Yanju Zhu, Yue Pan, Zhengling Liu, Chen Guo, Shaohui Ma.   

Abstract

Human coxsackievirus A9 (CVA9) is a member of Enterovirus B species and may cause aseptic meningitis. The complete genome analyses of two strains CVA9 A242/YN/CHN/2009 and A108/YN/CHN/2009 isolated from aseptic meningitis cases in Yunnan Province, China, in 2009 were performed. These two strains shared 81.3 and 80.7, 81.0 and 81.1 % nucleotide similarity with prototype strain Griggs in the VP1-encoding sequence and the complete genome sequence, respectively. Through phylogenetic analysis and homogeneity analysis for twenty-eight VP1-encoding sequences, CVA9 strains could be divided into four genotypes and the Chinese strains might belong to genotype D. Similarity plot and bootscanning analyses showed evidence of recombination with other EVB viruses. In conclusion, persistent surveillance of circulating enterovirus might help understand the enterovirus evolution.

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Year:  2015        PMID： 25680342     DOI： 10.1007/s11262-015-1180-2

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  28 in total

1.  Molecular evolution of the human enteroviruses: correlation of serotype with VP1 sequence and application to picornavirus classification.

Authors:  M S Oberste; K Maher; D R Kilpatrick; M A Pallansch
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

2.  [Complete genome sequence characteristics of human enterovirus 71 strain isolated in Yunnan, China].

Authors:  Hua Li; Cong-Wen Shao; Yue Pan; Hua-Xin Ke; Shao-Hui Ma
Journal:  Bing Du Xue Bao       Date:  2012-03

3.  Molecular epidemiology and evolution of coxsackievirus A9.

Authors:  J Santti; H Harvala; L Kinnunen; T Hyypiä
Journal:  J Gen Virol       Date:  2000-05       Impact factor: 3.891

4.  Rubella virus genotype 1G and echovirus 9 as etiologic agents of exanthematous diseases in Brazil: insights from phylogenetic analysis.

Authors:  Cristina Adelaide Figueiredo; Adriana Luchs; Denise Hage Russo; Rita de Cassia Compagnoli Carmona; Ana Maria Sardinha Afonso; Maria Isabel de Oliveira; Suely Pires Curti; José Cassio de Moraes; Cristiana M Toscano; Flavia Helena Ciccone; Maria do Carmo Sampaio Tavares Timenetsky
Journal:  Arch Virol       Date:  2013-12-11       Impact factor: 2.574

5.  An outbreak of aseptic meningitis caused by coxsackievirus A9 in Gansu, the People's Republic of China.

Authors:  Aili Cui; Deshan Yu; Zhen Zhu; Lei Meng; Hui Li; Jianfeng Liu; Guiyan Liu; Naiying Mao; Wenbo Xu
Journal:  Virol J       Date:  2010-04-06       Impact factor: 4.099

6.  Recombination strategies and evolutionary dynamics of the Human enterovirus A global gene pool.

Authors:  Alexander N Lukashev; Elena Yu Shumilina; Ilya S Belalov; Olga E Ivanova; Tatiana P Eremeeva; Vadim I Reznik; O E Trotsenko; Jan Felix Drexler; Christian Drosten
Journal:  J Gen Virol       Date:  2014-01-14       Impact factor: 3.891

7.  [Genomic characteristics of coxsackievirus B5 A210/KM/09 strain isolated in Yunnan, China].

Authors:  Jiansheng Liu; Congwen Shao; Weizhong Zhao; Yunkun Zhang; Ma Ji; Yanju Zhu; Zhongfei Ma; Shaohui Ma
Journal:  Zhonghua Liu Xing Bing Xue Za Zhi       Date:  2014-03

8.  [Complete nucleotide sequence of a human coxsackievirus A16 strain KMM08 isolated in Kunming, China in 2008].

Authors:  Shao-hui Ma; Yue Pan; Chun-yan He; Jun-ying Chen; Hai-jing Shi; Qiang-ming Sun; Qi-han Li
Journal:  Zhonghua Liu Xing Bing Xue Za Zhi       Date:  2012-02

9.  Aseptic meningitis outbreak caused by echovirus 30 in two regions in Bulgaria, May-August 2012.

Authors:  Z Mladenova; G Buttinelli; A Dikova; A Stoyanova; M Troyancheva; R Komitova; M Stoycheva; L Pekova; K Parmakova; L Fiore
Journal:  Epidemiol Infect       Date:  2013-12-19       Impact factor: 4.434

10.  Molecular characterization of echovirus 30-associated outbreak of aseptic meningitis in Guangdong in 2012.

Authors:  Hong Xiao; Dawei Guan; Ruiyu Chen; Pingxi Chen; Corina Monagin; Wei Li; Juan Su; Cong Ma; Wanli Zhang; Changwen Ke
Journal:  Virol J       Date:  2013-08-23       Impact factor: 4.099
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  4 in total

1.  Molecular Epidemiology and Evolution of Coxsackievirus A9.

Authors:  Hehe Zhao; Jianxing Wang; Jianhua Chen; Ruifang Huang; Yong Zhang; Jinbo Xiao; Yang Song; Tianjiao Ji; Qian Yang; Shuangli Zhu; Dongyan Wang; Huanhuan Lu; Zhenzhi Han; Guoyan Zhang; Jichen Li; Dongmei Yan
Journal:  Viruses       Date:  2022-04-15       Impact factor: 5.818

2.  Molecular characterization of two novel echovirus 18 recombinants associated with hand-foot-mouth disease.

Authors:  Haihao Zhang; Yilin Zhao; Hongbo Liu; Hao Sun; Xiaoqin Huang; Zhaoqing Yang; Shaohui Ma
Journal:  Sci Rep       Date:  2017-08-16       Impact factor: 4.379

3.  Identification of a new recombinant strain of echovirus 33 from children with hand, foot, and mouth disease complicated by meningitis in Yunnan, China.

Authors:  Jie Zhang; Hongbo Liu; Yilin Zhao; Haihao Zhang; Hao Sun; Xiaoqin Huang; Zhaoqing Yang; Jiansheng Liu; Shaohui Ma
Journal:  Virol J       Date:  2019-05-08       Impact factor: 4.099

4.  Characterization of four vaccine-related polioviruses including two intertypic type 3/type 2 recombinants associated with aseptic encephalitis.

Authors:  Jiansheng Liu; Haihao Zhang; Yilin Zhao; Longhui Xia; Chen Guo; Huai Yang; Na Luo; Zhanlong He; Shaohui Ma
Journal:  Virol J       Date:  2016-09-27       Impact factor: 4.099
  4 in total

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