Literature DB >> 25676480

Azide-tagged sphingolipids: new tools for metabolic flux analysis.

María Garrido1, José Luis Abad, Gemma Fabriàs, Josefina Casas, Antonio Delgado.   

Abstract

Several diseases involve alterations in sphingolipid metabolism, so the development of tools for the analysis of sphingolipid metabolic fluxes is of interest. In this work, ω-azidosphingolipids 1-3 have been synthesized and tested as tracers in live cells. The synthesis starts from (S)-Garner's aldehyde and uses bromide or tosyloxy precursors for the introduction of the azido group into the sphingoid base. Studies in HGC-27 cells showed that probes 1-3 compete with the natural metabolites and are incorporated into sphingolipid pathways without affecting cell viability. The reactivity and bioorthogonality of the terminal azido group have been exploited by means of click reactions with different azadibenzocyclooctyne tags. This allows the mass spectrometric characterization of azidosphingolipidomes in pooled samples from different cell populations after independent treatments, providing proof of concept of the applicability of this technology in sphingolipid metabolic flux analysis.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  azides; bioorthogonality; click chemistry; high-throughput screening; lipidomes; sphingolipids

Mesh:

Substances:

Year:  2015        PMID: 25676480     DOI: 10.1002/cbic.201402649

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  2 in total

1.  Live-Cell Imaging of Sterculic Acid-a Naturally Occurring 1,2-Cyclopropene Fatty Acid-by Bioorthogonal Reaction with Turn-On Tetrazine-Fluorophore Conjugates.

Authors:  Kristine Bertheussen; Merel van de Plassche; Thomas Bakkum; Berend Gagestein; Iakovia Ttofi; Alexi J C Sarris; Herman S Overkleeft; Mario van der Stelt; Sander I van Kasteren
Journal:  Angew Chem Int Ed Engl       Date:  2022-08-08       Impact factor: 16.823

Review 2.  The foundations and development of lipidomics.

Authors:  Xianlin Han; Richard W Gross
Journal:  J Lipid Res       Date:  2021-12-22       Impact factor: 5.922

  2 in total

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