Literature DB >> 25675497

Critical and maximally informative encoding between neural populations in the retina.

David B Kastner1, Stephen A Baccus2, Tatyana O Sharpee3.   

Abstract

Computation in the brain involves multiple types of neurons, yet the organizing principles for how these neurons work together remain unclear. Information theory has offered explanations for how different types of neurons can maximize the transmitted information by encoding different stimulus features. However, recent experiments indicate that separate neuronal types exist that encode the same filtered version of the stimulus, but then the different cell types signal the presence of that stimulus feature with different thresholds. Here we show that the emergence of these neuronal types can be quantitatively described by the theory of transitions between different phases of matter. The two key parameters that control the separation of neurons into subclasses are the mean and standard deviation (SD) of noise affecting neural responses. The average noise across the neural population plays the role of temperature in the classic theory of phase transitions, whereas the SD is equivalent to pressure or magnetic field, in the case of liquid-gas and magnetic transitions, respectively. Our results account for properties of two recently discovered types of salamander Off retinal ganglion cells, as well as the absence of multiple types of On cells. We further show that, across visual stimulus contrasts, retinal circuits continued to operate near the critical point whose quantitative characteristics matched those expected near a liquid-gas critical point and described by the nearest-neighbor Ising model in three dimensions. By operating near a critical point, neural circuits can maximize information transmission in a given environment while retaining the ability to quickly adapt to a new environment.

Keywords:  information theory; neural coding; phase transitions; scaling

Mesh:

Substances:

Year:  2015        PMID: 25675497      PMCID: PMC4345597          DOI: 10.1073/pnas.1418092112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Functional organization of ganglion cells in the salamander retina.

Authors:  Ronen Segev; Jason Puchalla; Michael J Berry
Journal:  J Neurophysiol       Date:  2005-11-23       Impact factor: 2.714

2.  Weak pairwise correlations imply strongly correlated network states in a neural population.

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Authors:  Alexander P Nikitin; Nigel G Stocks; Robert P Morse; Mark D McDonnell
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5.  Theory and implementation of infomax filters for the retina.

Authors:  M Haft; J L van Hemmen
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6.  Geometrical aspects of statistical mechanics.

Authors: 
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7.  Design of a trichromatic cone array.

Authors:  Patrick Garrigan; Charles P Ratliff; Jennifer M Klein; Peter Sterling; David H Brainard; Vijay Balasubramanian
Journal:  PLoS Comput Biol       Date:  2010-02-12       Impact factor: 4.475

8.  Relations between short-range and long-range Ising models.

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Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2014-06-12

9.  Being critical of criticality in the brain.

Authors:  John M Beggs; Nicholas Timme
Journal:  Front Physiol       Date:  2012-06-07       Impact factor: 4.566

10.  Efficient coding of spatial information in the primate retina.

Authors:  Eizaburo Doi; Jeffrey L Gauthier; Greg D Field; Jonathon Shlens; Alexander Sher; Martin Greschner; Timothy A Machado; Lauren H Jepson; Keith Mathieson; Deborah E Gunning; Alan M Litke; Liam Paninski; E J Chichilnisky; Eero P Simoncelli
Journal:  J Neurosci       Date:  2012-11-14       Impact factor: 6.167

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  28 in total

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Review 3.  The dynamic receptive fields of retinal ganglion cells.

Authors:  Sophia Wienbar; Gregory W Schwartz
Journal:  Prog Retin Eye Res       Date:  2018-06-23       Impact factor: 21.198

4.  Computing and optimizing over all fixed-points of discrete systems on large networks.

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Review 5.  Optimizing Neural Information Capacity through Discretization.

Authors:  Tatyana O Sharpee
Journal:  Neuron       Date:  2017-06-07       Impact factor: 17.173

Review 6.  Toward functional classification of neuronal types.

Authors:  Tatyana O Sharpee
Journal:  Neuron       Date:  2014-09-17       Impact factor: 17.173

Review 7.  Computational implications of biophysical diversity and multiple timescales in neurons and synapses for circuit performance.

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Review 8.  Understanding the retinal basis of vision across species.

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Review 9.  Stimulus- and goal-oriented frameworks for understanding natural vision.

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10.  Structures of Neural Correlation and How They Favor Coding.

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Journal:  Neuron       Date:  2016-01-20       Impact factor: 17.173

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